RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 BEND3Q5T5X7 828 aa17.08■□□□□ 0.32
ACTN4-205ENST00000477174 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
ACTN4-205ENST00000477174 PTPRCP08575 1304 aa17.07■□□□□ 0.32
ACTN4-205ENST00000477174 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
ACTN4-205ENST00000477174 RPS8P62241 208 aaKnown RBP17.07■□□□□ 0.32
ACTN4-205ENST00000477174 DPY19L2Q6NUT2 758 aa17.07■□□□□ 0.32
ACTN4-205ENST00000477174 ZNF277Q9NRM2 450 aaPredicted RBP17.07■□□□□ 0.32
ACTN4-205ENST00000477174 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
ACTN4-205ENST00000477174 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
ACTN4-205ENST00000477174 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
ACTN4-205ENST00000477174 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
ACTN4-205ENST00000477174 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
ACTN4-205ENST00000477174 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
ACTN4-205ENST00000477174 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
ACTN4-205ENST00000477174 CELF1Q92879 486 aaKnown RBP17.05■□□□□ 0.32
ACTN4-205ENST00000477174 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
ACTN4-205ENST00000477174 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 SBF1O95248 1867 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-205ENST00000477174 CASP7P55210 303 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 CTSWP56202 376 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 SLC4A10Q6U841 1118 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 MPNDQ8N594 471 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
ACTN4-205ENST00000477174 SRCIN1Q9C0H9 1055 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
ACTN4-205ENST00000477174 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
ACTN4-205ENST00000477174 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
ACTN4-205ENST00000477174 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
ACTN4-205ENST00000477174 SEC31BQ9NQW1 1179 aa17.03■□□□□ 0.32
ACTN4-205ENST00000477174 KIF3CO14782 793 aa17.02■□□□□ 0.32
ACTN4-205ENST00000477174 CSF1RP07333 972 aa17.02■□□□□ 0.32
ACTN4-205ENST00000477174 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.32
ACTN4-205ENST00000477174 NMRK2Q9NPI5 230 aa17.02■□□□□ 0.32
ACTN4-205ENST00000477174 FZD9O00144 591 aa17.01■□□□□ 0.31
ACTN4-205ENST00000477174 GRM8O00222 908 aa17.01■□□□□ 0.31
ACTN4-205ENST00000477174 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
ACTN4-205ENST00000477174 ANKRD18AQ8IVF6 992 aa17.01■□□□□ 0.31
ACTN4-205ENST00000477174 CDC5LQ99459 802 aaKnown RBP17.01■□□□□ 0.31
ACTN4-205ENST00000477174 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
ACTN4-205ENST00000477174 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
ACTN4-205ENST00000477174 RTL9Q8NET4 1388 aa17.01■□□□□ 0.31
ACTN4-205ENST00000477174 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
ACTN4-205ENST00000477174 C1QTNF8P60827 252 aa17■□□□□ 0.31
ACTN4-205ENST00000477174 SLC51AQ86UW1 340 aa17■□□□□ 0.31
ACTN4-205ENST00000477174 LARGE2Q8N3Y3 721 aa17■□□□□ 0.31
ACTN4-205ENST00000477174 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
ACTN4-205ENST00000477174 GREM2Q9H772 168 aa17■□□□□ 0.31
ACTN4-205ENST00000477174 NSFL1CQ9UNZ2 370 aaKnown RBP17■□□□□ 0.31
ACTN4-205ENST00000477174 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
ACTN4-205ENST00000477174 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
ACTN4-205ENST00000477174 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
ACTN4-205ENST00000477174 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
ACTN4-205ENST00000477174 TOMM70O94826 608 aa16.98■□□□□ 0.31
ACTN4-205ENST00000477174 BSDC1Q9NW68 430 aaPredicted RBP16.98■□□□□ 0.31
ACTN4-205ENST00000477174 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
ACTN4-205ENST00000477174 UTYO14607 1347 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
ACTN4-205ENST00000477174 GPSM2P81274 684 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 FOXO4P98177 505 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 C16orf71Q8IYS4 520 aaPredicted RBP16.97■□□□□ 0.31
ACTN4-205ENST00000477174 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 API5Q9BZZ5 524 aaKnown RBP16.97■□□□□ 0.31
ACTN4-205ENST00000477174 LAMB2P55268 1798 aa16.97■□□□□ 0.31
ACTN4-205ENST00000477174 ITGA6P23229 1130 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
ACTN4-205ENST00000477174 AOC3Q16853 763 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 GPC2Q8N158 579 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 L3MBTL3Q96JM7 780 aaPredicted RBP16.96■□□□□ 0.31
ACTN4-205ENST00000477174 ANKIB1Q9P2G1 1089 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 ZNRF3Q9ULT6 936 aa16.96■□□□□ 0.31
ACTN4-205ENST00000477174 POTECB2RU33 542 aa16.95■□□□□ 0.3
ACTN4-205ENST00000477174 C6orf229H3BNL8 230 aa16.95■□□□□ 0.3
ACTN4-205ENST00000477174 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
ACTN4-205ENST00000477174 IGHMBP2P38935 993 aaKnown RBP16.95■□□□□ 0.3
ACTN4-205ENST00000477174 CCT4P50991 539 aaKnown RBP16.95■□□□□ 0.3
ACTN4-205ENST00000477174 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
ACTN4-205ENST00000477174 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
ACTN4-205ENST00000477174 EYA3Q99504 573 aa16.95■□□□□ 0.3
ACTN4-205ENST00000477174 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
ACTN4-205ENST00000477174 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 NBPF7P0C2Y1 421 aaPredicted RBP16.94■□□□□ 0.3
ACTN4-205ENST00000477174 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
ACTN4-205ENST00000477174 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 USP44Q9H0E7 712 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 GGA1Q9UJY5 639 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 MINPP1Q9UNW1 487 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 DICER1Q9UPY3 1922 aaKnown RBP16.94■□□□□ 0.3
ACTN4-205ENST00000477174 XDHP47989 1333 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 ZNF541Q9H0D2 1346 aa16.94■□□□□ 0.3
ACTN4-205ENST00000477174 IQCA1LA6NCM1 817 aa16.93■□□□□ 0.3
ACTN4-205ENST00000477174 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms