RNA–Protein interactions for RNA: ENST00000476683.1

SCN5A-212, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 3

Gene SCN5A, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-212ENST00000476683 BEND3Q5T5X7 828 aa20.65■□□□□ 0.9
SCN5A-212ENST00000476683 PSMD1Q99460 953 aa20.65■□□□□ 0.9
SCN5A-212ENST00000476683 GPBP1L1Q9HC44 474 aaPredicted RBP20.65■□□□□ 0.9
SCN5A-212ENST00000476683 SLC51AQ86UW1 340 aa20.64■□□□□ 0.89
SCN5A-212ENST00000476683 SP8Q8IXZ3 490 aa20.64■□□□□ 0.89
SCN5A-212ENST00000476683 ZNF526Q8TF50 670 aaPredicted RBP20.64■□□□□ 0.89
SCN5A-212ENST00000476683 CCDC88AQ3V6T2 1871 aa20.63■□□□□ 0.89
SCN5A-212ENST00000476683 CASP7P55210 303 aa20.63■□□□□ 0.89
SCN5A-212ENST00000476683 UBE3BQ7Z3V4 1068 aa20.63■□□□□ 0.89
SCN5A-212ENST00000476683 TMC4Q7Z404 712 aa20.63■□□□□ 0.89
SCN5A-212ENST00000476683 PTPRCP08575 1304 aa20.62■□□□□ 0.89
SCN5A-212ENST00000476683 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
SCN5A-212ENST00000476683 TMX4Q9H1E5 349 aaPredicted RBP20.62■□□□□ 0.89
SCN5A-212ENST00000476683 ZNF277Q9NRM2 450 aaPredicted RBP20.62■□□□□ 0.89
SCN5A-212ENST00000476683 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
SCN5A-212ENST00000476683 BCL2L13Q9BXK5 485 aa20.61■□□□□ 0.89
SCN5A-212ENST00000476683 DICER1Q9UPY3 1922 aaKnown RBP20.61■□□□□ 0.89
SCN5A-212ENST00000476683 ALDH1L1O75891 902 aa20.6■□□□□ 0.89
SCN5A-212ENST00000476683 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
SCN5A-212ENST00000476683 CTSWP56202 376 aa20.6■□□□□ 0.89
SCN5A-212ENST00000476683 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
SCN5A-212ENST00000476683 TTLL11Q8NHH1 800 aa20.6■□□□□ 0.89
SCN5A-212ENST00000476683 PLA2G12BQ9BX93 195 aa20.6■□□□□ 0.89
SCN5A-212ENST00000476683 SMC4Q9NTJ3 1288 aa20.6■□□□□ 0.89
SCN5A-212ENST00000476683 TAF1P21675 1872 aa20.6■□□□□ 0.89
SCN5A-212ENST00000476683 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
SCN5A-212ENST00000476683 GLTPD2A6NH11 291 aa20.59■□□□□ 0.89
SCN5A-212ENST00000476683 BRPF1P55201 1214 aaPredicted RBP20.59■□□□□ 0.89
SCN5A-212ENST00000476683 RTFDC1Q9BY42 306 aaPredicted RBP20.59■□□□□ 0.89
SCN5A-212ENST00000476683 SEC31BQ9NQW1 1179 aa20.59■□□□□ 0.89
SCN5A-212ENST00000476683 SLC4A10Q6U841 1118 aa20.58■□□□□ 0.89
SCN5A-212ENST00000476683 SRCIN1Q9C0H9 1055 aa20.58■□□□□ 0.89
SCN5A-212ENST00000476683 RTL9Q8NET4 1388 aa20.58■□□□□ 0.88
SCN5A-212ENST00000476683 COL4A1P02462 1669 aa20.58■□□□□ 0.88
SCN5A-212ENST00000476683 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 GRM8O00222 908 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 KIF3CO14782 793 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 RARSP54136 660 aaKnown RBP20.57■□□□□ 0.88
SCN5A-212ENST00000476683 TIAM2Q8IVF5 1701 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 MPNDQ8N594 471 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
SCN5A-212ENST00000476683 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 NMRK2Q9NPI5 230 aa20.57■□□□□ 0.88
SCN5A-212ENST00000476683 CSF1RP07333 972 aa20.56■□□□□ 0.88
SCN5A-212ENST00000476683 DPY19L2Q6NUT2 758 aa20.56■□□□□ 0.88
SCN5A-212ENST00000476683 DPP8Q6V1X1 898 aaPredicted RBP20.56■□□□□ 0.88
SCN5A-212ENST00000476683 SUPT20HQ8NEM7 779 aa20.55■□□□□ 0.88
SCN5A-212ENST00000476683 GREM2Q9H772 168 aa20.55■□□□□ 0.88
SCN5A-212ENST00000476683 LRRC37AA6NMS7 1700 aa20.55■□□□□ 0.88
SCN5A-212ENST00000476683 FZD9O00144 591 aa20.54■□□□□ 0.88
SCN5A-212ENST00000476683 FOXO4P98177 505 aa20.54■□□□□ 0.88
SCN5A-212ENST00000476683 C9orf78Q9NZ63 289 aaPredicted RBP20.54■□□□□ 0.88
SCN5A-212ENST00000476683 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
SCN5A-212ENST00000476683 LARGE2Q8N3Y3 721 aa20.53■□□□□ 0.88
SCN5A-212ENST00000476683 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
SCN5A-212ENST00000476683 CDC5LQ99459 802 aaKnown RBP20.53■□□□□ 0.88
SCN5A-212ENST00000476683 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
SCN5A-212ENST00000476683 NOB1Q9ULX3 412 aaKnown RBP20.53■□□□□ 0.88
SCN5A-212ENST00000476683 MYH3P11055 1940 aa20.53■□□□□ 0.88
SCN5A-212ENST00000476683 UTYO14607 1347 aa20.53■□□□□ 0.88
SCN5A-212ENST00000476683 C1QTNF8P60827 252 aa20.52■□□□□ 0.88
SCN5A-212ENST00000476683 GPSM2P81274 684 aa20.52■□□□□ 0.88
SCN5A-212ENST00000476683 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
SCN5A-212ENST00000476683 COL4A5P29400 1685 aa20.51■□□□□ 0.87
SCN5A-212ENST00000476683 PPIP5K2O43314 1243 aa20.51■□□□□ 0.87
SCN5A-212ENST00000476683 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
SCN5A-212ENST00000476683 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
SCN5A-212ENST00000476683 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
SCN5A-212ENST00000476683 VEGFAP15692 232 aaPredicted RBP20.5■□□□□ 0.87
SCN5A-212ENST00000476683 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
SCN5A-212ENST00000476683 AOC3Q16853 763 aa20.5■□□□□ 0.87
SCN5A-212ENST00000476683 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
SCN5A-212ENST00000476683 ARHGAP45Q92619 1136 aa20.5■□□□□ 0.87
SCN5A-212ENST00000476683 API5Q9BZZ5 524 aaKnown RBP20.5■□□□□ 0.87
SCN5A-212ENST00000476683 BSDC1Q9NW68 430 aaPredicted RBP20.5■□□□□ 0.87
SCN5A-212ENST00000476683 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
SCN5A-212ENST00000476683 POTECB2RU33 542 aa20.49■□□□□ 0.87
SCN5A-212ENST00000476683 NBPF7P0C2Y1 421 aaPredicted RBP20.49■□□□□ 0.87
SCN5A-212ENST00000476683 ITGA6P23229 1130 aa20.49■□□□□ 0.87
SCN5A-212ENST00000476683 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
SCN5A-212ENST00000476683 KAZALD1Q96I82 304 aa20.49■□□□□ 0.87
SCN5A-212ENST00000476683 POLLQ9UGP5 575 aa20.49■□□□□ 0.87
SCN5A-212ENST00000476683 KIF16BQ96L93 1317 aa20.49■□□□□ 0.87
SCN5A-212ENST00000476683 LTBP1Q14766 1721 aa20.48■□□□□ 0.87
SCN5A-212ENST00000476683 TOMM70O94826 608 aa20.48■□□□□ 0.87
SCN5A-212ENST00000476683 LMBR1LQ6UX01 489 aa20.48■□□□□ 0.87
SCN5A-212ENST00000476683 NIM1KQ8IY84 436 aa20.48■□□□□ 0.87
SCN5A-212ENST00000476683 TBC1D16Q8TBP0 767 aa20.48■□□□□ 0.87
SCN5A-212ENST00000476683 L3MBTL3Q96JM7 780 aaPredicted RBP20.48■□□□□ 0.87
SCN5A-212ENST00000476683 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
SCN5A-212ENST00000476683 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
SCN5A-212ENST00000476683 C6orf229H3BNL8 230 aa20.47■□□□□ 0.87
SCN5A-212ENST00000476683 CCT4P50991 539 aaKnown RBP20.47■□□□□ 0.87
SCN5A-212ENST00000476683 SUCLG2Q96I99 432 aa20.47■□□□□ 0.87
SCN5A-212ENST00000476683 ZNRF3Q9ULT6 936 aa20.47■□□□□ 0.87
SCN5A-212ENST00000476683 MINPP1Q9UNW1 487 aa20.47■□□□□ 0.87
SCN5A-212ENST00000476683 ANKRD18BA2A2Z9 1011 aa20.46■□□□□ 0.87
SCN5A-212ENST00000476683 BCAR3O75815 825 aa20.46■□□□□ 0.87
SCN5A-212ENST00000476683 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
SCN5A-212ENST00000476683 EIF6P56537 245 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms