RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
CCM2-208ENST00000476594 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
CCM2-208ENST00000476594 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
CCM2-208ENST00000476594 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
CCM2-208ENST00000476594 E9PSI1 815 aa13.03□□□□□ -0.32
CCM2-208ENST00000476594 PDE8AO60658 829 aa13.03□□□□□ -0.32
CCM2-208ENST00000476594 HSPA6P17066 643 aa13.03□□□□□ -0.32
CCM2-208ENST00000476594 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
CCM2-208ENST00000476594 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
CCM2-208ENST00000476594 MPNDQ8N594 471 aa13.03□□□□□ -0.32
CCM2-208ENST00000476594 LAMB2P55268 1798 aa13.02□□□□□ -0.32
CCM2-208ENST00000476594 PPIP5K2O43314 1243 aa13.02□□□□□ -0.33
CCM2-208ENST00000476594 VAMP4O75379 141 aa13.02□□□□□ -0.33
CCM2-208ENST00000476594 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
CCM2-208ENST00000476594 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.33
CCM2-208ENST00000476594 CDHR2Q9BYE9 1310 aa13.02□□□□□ -0.33
CCM2-208ENST00000476594 WDR90Q96KV7 1748 aa13.02□□□□□ -0.33
CCM2-208ENST00000476594 APLP1P51693 650 aa13.01□□□□□ -0.33
CCM2-208ENST00000476594 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
CCM2-208ENST00000476594 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
CCM2-208ENST00000476594 SNED1Q8TER0 1413 aa13□□□□□ -0.33
CCM2-208ENST00000476594 FZD9O00144 591 aa13□□□□□ -0.33
CCM2-208ENST00000476594 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
CCM2-208ENST00000476594 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
CCM2-208ENST00000476594 GPC2Q8N158 579 aa13□□□□□ -0.33
CCM2-208ENST00000476594 LINS1Q8NG48 757 aa13□□□□□ -0.33
CCM2-208ENST00000476594 ZNF428Q96B54 188 aa13□□□□□ -0.33
CCM2-208ENST00000476594 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
CCM2-208ENST00000476594 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
CCM2-208ENST00000476594 EYA3Q99504 573 aa13□□□□□ -0.33
CCM2-208ENST00000476594 RTFDC1Q9BY42 306 aaPredicted RBP13□□□□□ -0.33
CCM2-208ENST00000476594 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
CCM2-208ENST00000476594 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
CCM2-208ENST00000476594 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
CCM2-208ENST00000476594 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
CCM2-208ENST00000476594 IGKV5-2P06315 115 aa12.98□□□□□ -0.33
CCM2-208ENST00000476594 CTSWP56202 376 aa12.98□□□□□ -0.33
CCM2-208ENST00000476594 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
CCM2-208ENST00000476594 G2E3Q7L622 706 aa12.98□□□□□ -0.33
CCM2-208ENST00000476594 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
CCM2-208ENST00000476594 ANKRD18AQ8IVF6 992 aa12.98□□□□□ -0.33
CCM2-208ENST00000476594 NSFL1CQ9UNZ2 370 aaKnown RBP12.98□□□□□ -0.33
CCM2-208ENST00000476594 SCN4AP35499 1836 aa12.97□□□□□ -0.33
CCM2-208ENST00000476594 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
CCM2-208ENST00000476594 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
CCM2-208ENST00000476594 GCKRQ14397 625 aa12.97□□□□□ -0.33
CCM2-208ENST00000476594 AOC3Q16853 763 aa12.97□□□□□ -0.33
CCM2-208ENST00000476594 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
CCM2-208ENST00000476594 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
CCM2-208ENST00000476594 CELF1Q92879 486 aaKnown RBP12.97□□□□□ -0.33
CCM2-208ENST00000476594 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
CCM2-208ENST00000476594 GJA3Q9Y6H8 435 aa12.97□□□□□ -0.33
CCM2-208ENST00000476594 G3V3G9 751 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
CCM2-208ENST00000476594 TNIP1Q15025 636 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 WASHC4Q2M389 1173 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 LDHDQ86WU2 507 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
CCM2-208ENST00000476594 LRRC37AA6NMS7 1700 aa12.96□□□□□ -0.34
CCM2-208ENST00000476594 PTPRCP08575 1304 aa12.95□□□□□ -0.34
CCM2-208ENST00000476594 H7C1W4 665 aa12.95□□□□□ -0.34
CCM2-208ENST00000476594 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
CCM2-208ENST00000476594 IGHMBP2P38935 993 aaKnown RBP12.95□□□□□ -0.34
CCM2-208ENST00000476594 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
CCM2-208ENST00000476594 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
CCM2-208ENST00000476594 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
CCM2-208ENST00000476594 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
CCM2-208ENST00000476594 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 XDHP47989 1333 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 POTECB2RU33 542 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 EPHX2P34913 555 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 EAPPQ56P03 285 aaPredicted RBP12.94□□□□□ -0.34
CCM2-208ENST00000476594 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
CCM2-208ENST00000476594 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
CCM2-208ENST00000476594 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 SEC31BQ9NQW1 1179 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
CCM2-208ENST00000476594 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 MYH3P11055 1940 aa12.94□□□□□ -0.34
CCM2-208ENST00000476594 UFL1O94874 794 aa12.93□□□□□ -0.34
CCM2-208ENST00000476594 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
CCM2-208ENST00000476594 SLC4A10Q6U841 1118 aa12.93□□□□□ -0.34
CCM2-208ENST00000476594 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
CCM2-208ENST00000476594 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
CCM2-208ENST00000476594 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
CCM2-208ENST00000476594 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
CCM2-208ENST00000476594 BSDC1Q9NW68 430 aaPredicted RBP12.93□□□□□ -0.34
CCM2-208ENST00000476594 F6X3S4 739 aa12.92□□□□□ -0.34
CCM2-208ENST00000476594 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
CCM2-208ENST00000476594 GPSM2P81274 684 aa12.92□□□□□ -0.34
CCM2-208ENST00000476594 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms