RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 SPINK5Q9NQ38 1064 aaPredicted RBP12.04□□□□□ -0.48
SEMA3C-208ENST00000475955 ZNF277Q9NRM2 450 aaPredicted RBP12.04□□□□□ -0.48
SEMA3C-208ENST00000475955 GSE1Q14687 1217 aa12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 TRMT112Q9UI30 125 aaKnown RBP12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 IL16Q14005 1332 aa12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 MYH3P11055 1940 aa12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
SEMA3C-208ENST00000475955 SCN4AP35499 1836 aa12.02□□□□□ -0.48
SEMA3C-208ENST00000475955 HSPA6P17066 643 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 G2E3Q7L622 706 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 FAM89AQ96GI7 184 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 RBM17Q96I25 401 aaKnown RBP12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 ABCC4O15439 1325 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
SEMA3C-208ENST00000475955 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 DDNO94850 711 aaPredicted RBP12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 TRIM28Q13263 835 aaKnown RBP12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 NFKBIBQ15653 356 aa12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 CCDC30Q5VVM6 783 aa12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 PSMD1Q99460 953 aa12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
SEMA3C-208ENST00000475955 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
SEMA3C-208ENST00000475955 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
SEMA3C-208ENST00000475955 RIC3Q7Z5B4 369 aa12□□□□□ -0.49
SEMA3C-208ENST00000475955 JARID2Q92833 1246 aaPredicted RBP12□□□□□ -0.49
SEMA3C-208ENST00000475955 MYD88Q99836 296 aa12□□□□□ -0.49
SEMA3C-208ENST00000475955 DUOX1Q9NRD9 1551 aa12□□□□□ -0.49
SEMA3C-208ENST00000475955 LTBP1Q14766 1721 aa12□□□□□ -0.49
SEMA3C-208ENST00000475955 SPEF2Q9C093 1822 aa12□□□□□ -0.49
SEMA3C-208ENST00000475955 VAMP4O75379 141 aa11.99□□□□□ -0.49
SEMA3C-208ENST00000475955 VEGFAP15692 232 aaPredicted RBP11.99□□□□□ -0.49
SEMA3C-208ENST00000475955 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
SEMA3C-208ENST00000475955 METTL22Q9BUU2 404 aaPredicted RBP11.99□□□□□ -0.49
SEMA3C-208ENST00000475955 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
SEMA3C-208ENST00000475955 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
SEMA3C-208ENST00000475955 FZD9O00144 591 aa11.98□□□□□ -0.49
SEMA3C-208ENST00000475955 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
SEMA3C-208ENST00000475955 EXOSC9Q06265 439 aaKnown RBP11.98□□□□□ -0.49
SEMA3C-208ENST00000475955 SF3B3Q15393 1217 aaKnown RBP11.98□□□□□ -0.49
SEMA3C-208ENST00000475955 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
SEMA3C-208ENST00000475955 MAP3K2Q9Y2U5 619 aa11.98□□□□□ -0.49
SEMA3C-208ENST00000475955 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 IRS4O14654 1257 aaPredicted RBP11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 RGS3P49796 1198 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 GRAPQ13588 217 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 SP8Q8IXZ3 490 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 C16orf71Q8IYS4 520 aaPredicted RBP11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 ZBTB38Q8NAP3 1195 aaPredicted RBP11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 GRAPLQ8TC17 118 aaPredicted RBP11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
SEMA3C-208ENST00000475955 BCAR3O75815 825 aa11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 BBOX1O75936 387 aa11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 RARSP54136 660 aaKnown RBP11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 HTRA3P83110 453 aa11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 FSTL1Q12841 308 aa11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 DDX46Q7L014 1031 aaKnown RBP11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 CCDC191Q8NCU4 936 aa11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 RTFDC1Q9BY42 306 aaPredicted RBP11.96□□□□□ -0.49
SEMA3C-208ENST00000475955 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 AOC3Q16853 763 aa11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 STK31Q9BXU1 1019 aa11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 SEC31BQ9NQW1 1179 aa11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 CWC25Q9NXE8 425 aaPredicted RBP11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 SCN9AQ15858 1988 aa11.95□□□□□ -0.5
SEMA3C-208ENST00000475955 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 FLIIQ13045 1269 aa11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 LARGE2Q8N3Y3 721 aa11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 MPNDQ8N594 471 aa11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 SMC1BQ8NDV3 1235 aa11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
SEMA3C-208ENST00000475955 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
SEMA3C-208ENST00000475955 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
SEMA3C-208ENST00000475955 APLP1P51693 650 aa11.93□□□□□ -0.5
SEMA3C-208ENST00000475955 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
SEMA3C-208ENST00000475955 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
SEMA3C-208ENST00000475955 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
SEMA3C-208ENST00000475955 POLR2AP24928 1970 aaKnown RBP11.92□□□□□ -0.5
SEMA3C-208ENST00000475955 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
SEMA3C-208ENST00000475955 PDE8AO60658 829 aa11.92□□□□□ -0.5
SEMA3C-208ENST00000475955 GPSM2P81274 684 aa11.92□□□□□ -0.5
SEMA3C-208ENST00000475955 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
SEMA3C-208ENST00000475955 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms