RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 UTP14AQ9BVJ6 771 aaKnown RBP15.1■□□□□ 0.01
MRPL55-227ENST00000475832 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
MRPL55-227ENST00000475832 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
MRPL55-227ENST00000475832 CASP7P55210 303 aa15.09■□□□□ 0.01
MRPL55-227ENST00000475832 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
MRPL55-227ENST00000475832 JARID2Q92833 1246 aaPredicted RBP15.09■□□□□ 0.01
MRPL55-227ENST00000475832 NOP58Q9Y2X3 529 aaKnown RBP15.09■□□□□ 0.01
MRPL55-227ENST00000475832 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0.01
MRPL55-227ENST00000475832 TOMM70O94826 608 aa15.08■□□□□ 0
MRPL55-227ENST00000475832 LMBR1LQ6UX01 489 aa15.08■□□□□ 0
MRPL55-227ENST00000475832 FAM89AQ96GI7 184 aa15.08■□□□□ 0
MRPL55-227ENST00000475832 KAZALD1Q96I82 304 aa15.08■□□□□ 0
MRPL55-227ENST00000475832 PLA2G12BQ9BX93 195 aa15.08■□□□□ 0
MRPL55-227ENST00000475832 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
MRPL55-227ENST00000475832 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
MRPL55-227ENST00000475832 CCDC57Q2TAC2 916 aa15.07■□□□□ 0
MRPL55-227ENST00000475832 FAM161AQ3B820 660 aa15.07■□□□□ 0
MRPL55-227ENST00000475832 USPL1Q5W0Q7 1092 aa15.07■□□□□ 0
MRPL55-227ENST00000475832 SKAP1Q86WV1 359 aa15.07■□□□□ 0
MRPL55-227ENST00000475832 KLRG1Q96E93 195 aa15.07■□□□□ 0
MRPL55-227ENST00000475832 NYXQ9GZU5 481 aa15.07■□□□□ 0
MRPL55-227ENST00000475832 SRP68Q9UHB9 627 aaKnown RBP15.07■□□□□ 0
MRPL55-227ENST00000475832 PDE8AO60658 829 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 MMP10P09238 476 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 PDE4AP27815 886 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
MRPL55-227ENST00000475832 FOXO4P98177 505 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 TAF7LQ5H9L4 462 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 CLASRPQ8N2M8 674 aaKnown RBP15.06■□□□□ 0
MRPL55-227ENST00000475832 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 SETDB2Q96T68 719 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 BCL11AQ9H165 835 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 COPRSQ9NQ92 184 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 CD2APQ9Y5K6 639 aa15.06■□□□□ 0
MRPL55-227ENST00000475832 SUSD4Q5VX71 490 aa15.05■□□□□ -0
MRPL55-227ENST00000475832 JMYQ8N9B5 988 aa15.05■□□□□ -0
MRPL55-227ENST00000475832 GPATCH3Q96I76 525 aa15.05■□□□□ -0
MRPL55-227ENST00000475832 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
MRPL55-227ENST00000475832 NPHP1O15259 732 aa15.04■□□□□ -0
MRPL55-227ENST00000475832 SMARCA5O60264 1052 aaPredicted RBP15.04■□□□□ -0
MRPL55-227ENST00000475832 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
MRPL55-227ENST00000475832 TM4SF1P30408 202 aa15.04■□□□□ -0
MRPL55-227ENST00000475832 IFIT5Q13325 482 aaKnown RBP15.04■□□□□ -0
MRPL55-227ENST00000475832 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
MRPL55-227ENST00000475832 FBXO3Q9UK99 471 aa15.04■□□□□ -0
MRPL55-227ENST00000475832 WWC3Q9ULE0 1092 aa15.04■□□□□ -0
MRPL55-227ENST00000475832 FAM177BA6PVY3 158 aa15.03■□□□□ -0
MRPL55-227ENST00000475832 CTSWP56202 376 aa15.03■□□□□ -0
MRPL55-227ENST00000475832 PA2G4Q9UQ80 394 aaKnown RBP15.03■□□□□ -0
MRPL55-227ENST00000475832 ANKRD36CQ5JPF3 1778 aa15.03■□□□□ -0
MRPL55-227ENST00000475832 ANKRD18BA2A2Z9 1011 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 NTSR2O95665 410 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 CSF1RP07333 972 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 IFIT2P09913 472 aaKnown RBP15.02■□□□□ -0
MRPL55-227ENST00000475832 PTPN12Q05209 780 aaKnown RBP15.02■□□□□ -0
MRPL55-227ENST00000475832 DDR1Q08345 913 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 BMP2KLQ5H9B9 411 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 TPTE2Q6XPS3 522 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 BICDL1Q6ZP65 573 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 NBPF5PQ86XG9 351 aaPredicted RBP15.02■□□□□ -0
MRPL55-227ENST00000475832 SIL1Q9H173 461 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 PCDH10Q9P2E7 1040 aa15.02■□□□□ -0
MRPL55-227ENST00000475832 KIF13BQ9NQT8 1826 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 SCN7AQ01118 1682 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 POLRMTO00411 1230 aaKnown RBP15.01□□□□□ -0.01
MRPL55-227ENST00000475832 CIAO1O76071 339 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 MX1P20591 662 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 IL15P40933 162 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-227ENST00000475832 RFX5P48382 616 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-227ENST00000475832 HTRA3P83110 453 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 CCDC152Q4G0S7 254 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 IL1RAPL2Q9NP60 686 aa15.01□□□□□ -0.01
MRPL55-227ENST00000475832 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 AOX1Q06278 1338 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 NFIXQ14938 502 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
MRPL55-227ENST00000475832 TTLL11Q8NHH1 800 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 BACH2Q9BYV9 841 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 OSBPL3Q9H4L5 887 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 TSHZ2Q9NRE2 1034 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 PARP3Q9Y6F1 533 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 NUP98P52948 1817 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 BCORQ6W2J9 1755 aa15□□□□□ -0.01
MRPL55-227ENST00000475832 CARMIL3Q8ND23 1372 aa14.99□□□□□ -0.01
MRPL55-227ENST00000475832 EYA2O00167 538 aa14.99□□□□□ -0.01
MRPL55-227ENST00000475832 ERC2O15083 957 aa14.99□□□□□ -0.01
MRPL55-227ENST00000475832 TTC22Q5TAA0 569 aa14.99□□□□□ -0.01
MRPL55-227ENST00000475832 CASC1Q6TDU7 716 aa14.99□□□□□ -0.01
MRPL55-227ENST00000475832 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
MRPL55-227ENST00000475832 HCLS1P14317 486 aaPredicted RBP14.98□□□□□ -0.01
MRPL55-227ENST00000475832 ITGA6P23229 1130 aa14.98□□□□□ -0.01
MRPL55-227ENST00000475832 PDE1AP54750 535 aa14.98□□□□□ -0.01
MRPL55-227ENST00000475832 AACSQ86V21 672 aa14.98□□□□□ -0.01
MRPL55-227ENST00000475832 KLHDC4Q8TBB5 520 aa14.98□□□□□ -0.01
MRPL55-227ENST00000475832 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
MRPL55-227ENST00000475832 NRXN2Q9P2S2 1712 aa14.97□□□□□ -0.01
MRPL55-227ENST00000475832 TTC41PQ6P2S7 1318 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms