RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 SLX4Q8IY92 1834 aa18.33■□□□□ 0.52
ABCF3-211ENST00000475728 H7C1W4 665 aa18.32■□□□□ 0.52
ABCF3-211ENST00000475728 KIF3CO14782 793 aa18.32■□□□□ 0.52
ABCF3-211ENST00000475728 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
ABCF3-211ENST00000475728 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-211ENST00000475728 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
ABCF3-211ENST00000475728 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
ABCF3-211ENST00000475728 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
ABCF3-211ENST00000475728 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
ABCF3-211ENST00000475728 BCL2L13Q9BXK5 485 aa18.31■□□□□ 0.52
ABCF3-211ENST00000475728 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
ABCF3-211ENST00000475728 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
ABCF3-211ENST00000475728 PSMD1Q99460 953 aa18.3■□□□□ 0.52
ABCF3-211ENST00000475728 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 APLP1P51693 650 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
ABCF3-211ENST00000475728 CTSWP56202 376 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
ABCF3-211ENST00000475728 SP8Q8IXZ3 490 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
ABCF3-211ENST00000475728 PLA2G12BQ9BX93 195 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 LAMB2P55268 1798 aa18.29■□□□□ 0.52
ABCF3-211ENST00000475728 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
ABCF3-211ENST00000475728 SUPT20HQ8NEM7 779 aa18.28■□□□□ 0.52
ABCF3-211ENST00000475728 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
ABCF3-211ENST00000475728 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
ABCF3-211ENST00000475728 CACNA1SQ13698 1873 aa18.27■□□□□ 0.52
ABCF3-211ENST00000475728 GRM8O00222 908 aa18.27■□□□□ 0.52
ABCF3-211ENST00000475728 RPS8P62241 208 aaKnown RBP18.27■□□□□ 0.52
ABCF3-211ENST00000475728 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
ABCF3-211ENST00000475728 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
ABCF3-211ENST00000475728 CASP7P55210 303 aa18.26■□□□□ 0.51
ABCF3-211ENST00000475728 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
ABCF3-211ENST00000475728 TTLL11Q8NHH1 800 aa18.26■□□□□ 0.51
ABCF3-211ENST00000475728 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
ABCF3-211ENST00000475728 FER1L6Q2WGJ9 1857 aa18.26■□□□□ 0.51
ABCF3-211ENST00000475728 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
ABCF3-211ENST00000475728 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
ABCF3-211ENST00000475728 DPP8Q6V1X1 898 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-211ENST00000475728 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
ABCF3-211ENST00000475728 MPNDQ8N594 471 aa18.25■□□□□ 0.51
ABCF3-211ENST00000475728 ARHGAP45Q92619 1136 aa18.25■□□□□ 0.51
ABCF3-211ENST00000475728 CELF1Q92879 486 aaKnown RBP18.25■□□□□ 0.51
ABCF3-211ENST00000475728 NOB1Q9ULX3 412 aaKnown RBP18.25■□□□□ 0.51
ABCF3-211ENST00000475728 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
ABCF3-211ENST00000475728 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
ABCF3-211ENST00000475728 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
ABCF3-211ENST00000475728 PRELPP51888 382 aa18.24■□□□□ 0.51
ABCF3-211ENST00000475728 ZNF277Q9NRM2 450 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-211ENST00000475728 DPY19L2Q6NUT2 758 aa18.23■□□□□ 0.51
ABCF3-211ENST00000475728 JDP2Q8WYK2 163 aa18.23■□□□□ 0.51
ABCF3-211ENST00000475728 RTFDC1Q9BY42 306 aaPredicted RBP18.23■□□□□ 0.51
ABCF3-211ENST00000475728 SEC31BQ9NQW1 1179 aa18.23■□□□□ 0.51
ABCF3-211ENST00000475728 SBF1O95248 1867 aa18.22■□□□□ 0.51
ABCF3-211ENST00000475728 CSF1RP07333 972 aa18.22■□□□□ 0.51
ABCF3-211ENST00000475728 HTRA3P83110 453 aa18.22■□□□□ 0.51
ABCF3-211ENST00000475728 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-211ENST00000475728 GREM2Q9H772 168 aa18.22■□□□□ 0.51
ABCF3-211ENST00000475728 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
ABCF3-211ENST00000475728 GLTPD2A6NH11 291 aa18.21■□□□□ 0.51
ABCF3-211ENST00000475728 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
ABCF3-211ENST00000475728 HDAC5Q9UQL6 1122 aa18.21■□□□□ 0.51
ABCF3-211ENST00000475728 UTYO14607 1347 aa18.21■□□□□ 0.51
ABCF3-211ENST00000475728 LARGE2Q8N3Y3 721 aa18.2■□□□□ 0.5
ABCF3-211ENST00000475728 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
ABCF3-211ENST00000475728 ANKRD18BA2A2Z9 1011 aa18.19■□□□□ 0.5
ABCF3-211ENST00000475728 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
ABCF3-211ENST00000475728 ITGA6P23229 1130 aa18.19■□□□□ 0.5
ABCF3-211ENST00000475728 IFIT5Q13325 482 aaKnown RBP18.19■□□□□ 0.5
ABCF3-211ENST00000475728 EYA3Q99504 573 aa18.19■□□□□ 0.5
ABCF3-211ENST00000475728 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
ABCF3-211ENST00000475728 CHMP3Q9Y3E7 222 aa18.19■□□□□ 0.5
ABCF3-211ENST00000475728 FOXO4P98177 505 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 LMBR1LQ6UX01 489 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 NIM1KQ8IY84 436 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 PODXL2Q9NZ53 605 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
ABCF3-211ENST00000475728 BCAR3O75815 825 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 TOMM70O94826 608 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-211ENST00000475728 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
ABCF3-211ENST00000475728 GPSM2P81274 684 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 ATF7IPQ6VMQ6 1270 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-211ENST00000475728 LRRC37AA6NMS7 1700 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 TIAM2Q8IVF5 1701 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 XDHP47989 1333 aa18.17■□□□□ 0.5
ABCF3-211ENST00000475728 MYH3P11055 1940 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 DICER1Q9UPY3 1922 aaKnown RBP18.16■□□□□ 0.5
ABCF3-211ENST00000475728 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 FZD9O00144 591 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 AOC3Q16853 763 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 TAF7LQ5H9L4 462 aa18.16■□□□□ 0.5
ABCF3-211ENST00000475728 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms