RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
ITSN1-227ENST00000475422 ABT1Q9ULW3 272 aaKnown RBP20.49■□□□□ 0.87
ITSN1-227ENST00000475422 LTBP1Q14766 1721 aa20.49■□□□□ 0.87
ITSN1-227ENST00000475422 ATP5J2-PTCD1G3V325 749 aa20.48■□□□□ 0.87
ITSN1-227ENST00000475422 DEFB115Q30KQ5 88 aa20.48■□□□□ 0.87
ITSN1-227ENST00000475422 AIDAQ96BJ3 306 aa20.48■□□□□ 0.87
ITSN1-227ENST00000475422 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
ITSN1-227ENST00000475422 CXCL9Q07325 125 aa20.47■□□□□ 0.87
ITSN1-227ENST00000475422 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
ITSN1-227ENST00000475422 FAM89AQ96GI7 184 aa20.47■□□□□ 0.87
ITSN1-227ENST00000475422 CALD1Q05682 793 aaKnown RBP20.46■□□□□ 0.87
ITSN1-227ENST00000475422 KIAA2012Q0VF49 1180 aa20.46■□□□□ 0.87
ITSN1-227ENST00000475422 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
ITSN1-227ENST00000475422 ISCA1Q9BUE6 129 aa20.46■□□□□ 0.87
ITSN1-227ENST00000475422 ADARB2Q9NS39 739 aaKnown RBP20.46■□□□□ 0.87
ITSN1-227ENST00000475422 GPRC5DQ9NZD1 345 aa20.46■□□□□ 0.87
ITSN1-227ENST00000475422 TAF1P21675 1872 aa20.45■□□□□ 0.86
ITSN1-227ENST00000475422 RASSF10A6NK89 507 aa20.45■□□□□ 0.86
ITSN1-227ENST00000475422 APAF1O14727 1248 aa20.45■□□□□ 0.86
ITSN1-227ENST00000475422 FOXN1O15353 648 aa20.45■□□□□ 0.86
ITSN1-227ENST00000475422 RTL5Q5HYW3 569 aaPredicted RBP20.45■□□□□ 0.86
ITSN1-227ENST00000475422 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
ITSN1-227ENST00000475422 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
ITSN1-227ENST00000475422 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
ITSN1-227ENST00000475422 RAD17O75943 681 aa20.44■□□□□ 0.86
ITSN1-227ENST00000475422 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
ITSN1-227ENST00000475422 GOLGA2Q08379 1002 aa20.44■□□□□ 0.86
ITSN1-227ENST00000475422 TNIP1Q15025 636 aa20.44■□□□□ 0.86
ITSN1-227ENST00000475422 ELL2O00472 640 aaPredicted RBP20.43■□□□□ 0.86
ITSN1-227ENST00000475422 GNAI1P63096 354 aa20.43■□□□□ 0.86
ITSN1-227ENST00000475422 PAXIP1Q6ZW49 1069 aaPredicted RBP20.43■□□□□ 0.86
ITSN1-227ENST00000475422 IFT57Q9NWB7 429 aa20.43■□□□□ 0.86
ITSN1-227ENST00000475422 TRAF5O00463 557 aa20.42■□□□□ 0.86
ITSN1-227ENST00000475422 IRS4O14654 1257 aaPredicted RBP20.42■□□□□ 0.86
ITSN1-227ENST00000475422 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
ITSN1-227ENST00000475422 CTCFP49711 727 aaPredicted RBP20.42■□□□□ 0.86
ITSN1-227ENST00000475422 FMR1Q06787 632 aaKnown RBP eCLIP20.42■□□□□ 0.86
ITSN1-227ENST00000475422 SF3B3Q15393 1217 aaKnown RBP20.42■□□□□ 0.86
ITSN1-227ENST00000475422 NSFL1CQ9UNZ2 370 aaKnown RBP20.42■□□□□ 0.86
ITSN1-227ENST00000475422 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
ITSN1-227ENST00000475422 WASHC4Q2M389 1173 aa20.41■□□□□ 0.86
ITSN1-227ENST00000475422 CELF1Q92879 486 aaKnown RBP20.41■□□□□ 0.86
ITSN1-227ENST00000475422 CDHR2Q9BYE9 1310 aa20.41■□□□□ 0.86
ITSN1-227ENST00000475422 C6orf229H3BNL8 230 aa20.4■□□□□ 0.86
ITSN1-227ENST00000475422 GRM1Q13255 1194 aa20.4■□□□□ 0.86
ITSN1-227ENST00000475422 TRIM28Q13263 835 aaKnown RBP20.4■□□□□ 0.86
ITSN1-227ENST00000475422 PHAXQ9H814 394 aaKnown RBP20.4■□□□□ 0.86
ITSN1-227ENST00000475422 WBP1LQ9NX94 342 aa20.4■□□□□ 0.86
ITSN1-227ENST00000475422 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.86
ITSN1-227ENST00000475422 HSP90B1P14625 803 aaKnown RBP20.39■□□□□ 0.85
ITSN1-227ENST00000475422 PRDM10Q9NQV6 1147 aa20.39■□□□□ 0.85
ITSN1-227ENST00000475422 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.85
ITSN1-227ENST00000475422 DUOX1Q9NRD9 1551 aa20.38■□□□□ 0.85
ITSN1-227ENST00000475422 YDJCA8MPS7 323 aa20.38■□□□□ 0.85
ITSN1-227ENST00000475422 RIMBP2O15034 1052 aa20.38■□□□□ 0.85
ITSN1-227ENST00000475422 ECE1P42892 770 aa20.38■□□□□ 0.85
ITSN1-227ENST00000475422 MAP2K1Q02750 393 aaPredicted RBP20.38■□□□□ 0.85
ITSN1-227ENST00000475422 MYD88Q99836 296 aa20.38■□□□□ 0.85
ITSN1-227ENST00000475422 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
ITSN1-227ENST00000475422 CNOT7Q9UIV1 285 aaKnown RBP20.38■□□□□ 0.85
ITSN1-227ENST00000475422 H7C1D1 291 aa20.37■□□□□ 0.85
ITSN1-227ENST00000475422 RPS8P62241 208 aaKnown RBP20.37■□□□□ 0.85
ITSN1-227ENST00000475422 GPSM2P81274 684 aa20.37■□□□□ 0.85
ITSN1-227ENST00000475422 CST9Q5W186 159 aa20.37■□□□□ 0.85
ITSN1-227ENST00000475422 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
ITSN1-227ENST00000475422 CAPNS2Q96L46 248 aa20.37■□□□□ 0.85
ITSN1-227ENST00000475422 EYA3Q99504 573 aa20.37■□□□□ 0.85
ITSN1-227ENST00000475422 DBNDD1Q9H9R9 158 aa20.37■□□□□ 0.85
ITSN1-227ENST00000475422 CELF2O95319 508 aaKnown RBP20.36■□□□□ 0.85
ITSN1-227ENST00000475422 LBX1P52954 281 aa20.36■□□□□ 0.85
ITSN1-227ENST00000475422 CYP4F22Q6NT55 531 aa20.36■□□□□ 0.85
ITSN1-227ENST00000475422 C8orf58Q8NAV2 365 aa20.36■□□□□ 0.85
ITSN1-227ENST00000475422 GLIS2Q9BZE0 524 aaPredicted RBP20.36■□□□□ 0.85
ITSN1-227ENST00000475422 DDX58O95786 925 aaKnown RBP20.35■□□□□ 0.85
ITSN1-227ENST00000475422 CCDC30Q5VVM6 783 aa20.35■□□□□ 0.85
ITSN1-227ENST00000475422 MICALL2Q8IY33 904 aa20.35■□□□□ 0.85
ITSN1-227ENST00000475422 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
ITSN1-227ENST00000475422 ZC3H15Q8WU90 426 aaKnown RBP20.35■□□□□ 0.85
ITSN1-227ENST00000475422 BEGAINQ9BUH8 593 aa20.35■□□□□ 0.85
ITSN1-227ENST00000475422 POLLQ9UGP5 575 aa20.35■□□□□ 0.85
ITSN1-227ENST00000475422 ZBTB12Q9Y330 459 aaPredicted RBP20.35■□□□□ 0.85
ITSN1-227ENST00000475422 TLL2Q9Y6L7 1015 aa20.35■□□□□ 0.85
ITSN1-227ENST00000475422 G3V3G9 751 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 PSMD14O00487 310 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 HIRAP54198 1017 aaPredicted RBP20.34■□□□□ 0.85
ITSN1-227ENST00000475422 DOK7Q18PE1 504 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 DCAF8Q5TAQ9 597 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 TRPM4Q8TD43 1214 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 GPR101Q96P66 508 aaPredicted RBP20.34■□□□□ 0.85
ITSN1-227ENST00000475422 ZNF408Q9H9D4 720 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
ITSN1-227ENST00000475422 PGAP2Q9UHJ9 254 aa20.34■□□□□ 0.85
ITSN1-227ENST00000475422 SHTN1A0MZ66 631 aa20.33■□□□□ 0.85
ITSN1-227ENST00000475422 CCDC152Q4G0S7 254 aa20.33■□□□□ 0.85
ITSN1-227ENST00000475422 CDC37L1Q7L3B6 337 aa20.33■□□□□ 0.85
ITSN1-227ENST00000475422 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
ITSN1-227ENST00000475422 ZC3H12CQ9C0D7 883 aaKnown RBP20.33■□□□□ 0.85
ITSN1-227ENST00000475422 SEC31BQ9NQW1 1179 aa20.33■□□□□ 0.85
ITSN1-227ENST00000475422 ANKIB1Q9P2G1 1089 aa20.33■□□□□ 0.85
ITSN1-227ENST00000475422 ECE2O60344 883 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms