RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 RASSF7Q02833 373 aa16.92■□□□□ 0.3
RTN1-205ENST00000474911 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
RTN1-205ENST00000474911 MAP3K2Q9Y2U5 619 aa16.92■□□□□ 0.3
RTN1-205ENST00000474911 LTBP3Q9NS15 1303 aa16.92■□□□□ 0.3
RTN1-205ENST00000474911 LAMB2P55268 1798 aa16.92■□□□□ 0.3
RTN1-205ENST00000474911 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
RTN1-205ENST00000474911 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
RTN1-205ENST00000474911 ZBTB40Q9NUA8 1239 aa16.91■□□□□ 0.3
RTN1-205ENST00000474911 TIAM2Q8IVF5 1701 aa16.91■□□□□ 0.3
RTN1-205ENST00000474911 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
RTN1-205ENST00000474911 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
RTN1-205ENST00000474911 ISCA1Q9BUE6 129 aa16.9■□□□□ 0.3
RTN1-205ENST00000474911 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
RTN1-205ENST00000474911 PRELPP51888 382 aa16.89■□□□□ 0.29
RTN1-205ENST00000474911 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
RTN1-205ENST00000474911 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
RTN1-205ENST00000474911 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
RTN1-205ENST00000474911 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
RTN1-205ENST00000474911 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
RTN1-205ENST00000474911 BEND3Q5T5X7 828 aa16.88■□□□□ 0.29
RTN1-205ENST00000474911 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
RTN1-205ENST00000474911 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
RTN1-205ENST00000474911 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
RTN1-205ENST00000474911 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
RTN1-205ENST00000474911 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
RTN1-205ENST00000474911 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
RTN1-205ENST00000474911 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
RTN1-205ENST00000474911 ALDH1L1O75891 902 aa16.87■□□□□ 0.29
RTN1-205ENST00000474911 C1QTNF8P60827 252 aa16.87■□□□□ 0.29
RTN1-205ENST00000474911 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
RTN1-205ENST00000474911 METTL22Q9BUU2 404 aaPredicted RBP16.87■□□□□ 0.29
RTN1-205ENST00000474911 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
RTN1-205ENST00000474911 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 GNAI3P08754 354 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 MEIS3Q99687 375 aa16.86■□□□□ 0.29
RTN1-205ENST00000474911 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
RTN1-205ENST00000474911 KIF3CO14782 793 aa16.85■□□□□ 0.29
RTN1-205ENST00000474911 GRIPAP1Q4V328 841 aa16.85■□□□□ 0.29
RTN1-205ENST00000474911 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
RTN1-205ENST00000474911 FKBP4Q02790 459 aaKnown RBP eCLIP16.84■□□□□ 0.29
RTN1-205ENST00000474911 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
RTN1-205ENST00000474911 MYD88Q99836 296 aa16.84■□□□□ 0.29
RTN1-205ENST00000474911 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.28
RTN1-205ENST00000474911 CCDC191Q8NCU4 936 aa16.83■□□□□ 0.28
RTN1-205ENST00000474911 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
RTN1-205ENST00000474911 GLTPD2A6NH11 291 aa16.82■□□□□ 0.28
RTN1-205ENST00000474911 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
RTN1-205ENST00000474911 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
RTN1-205ENST00000474911 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
RTN1-205ENST00000474911 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
RTN1-205ENST00000474911 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
RTN1-205ENST00000474911 ZBTB38Q8NAP3 1195 aaPredicted RBP16.82■□□□□ 0.28
RTN1-205ENST00000474911 FAM89AQ96GI7 184 aa16.82■□□□□ 0.28
RTN1-205ENST00000474911 PSMD1Q99460 953 aa16.82■□□□□ 0.28
RTN1-205ENST00000474911 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
RTN1-205ENST00000474911 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
RTN1-205ENST00000474911 GNAI2P04899 355 aa16.81■□□□□ 0.28
RTN1-205ENST00000474911 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
RTN1-205ENST00000474911 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
RTN1-205ENST00000474911 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
RTN1-205ENST00000474911 NMRK2Q9NPI5 230 aa16.81■□□□□ 0.28
RTN1-205ENST00000474911 TAF1P21675 1872 aa16.81■□□□□ 0.28
RTN1-205ENST00000474911 WDR90Q96KV7 1748 aa16.8■□□□□ 0.28
RTN1-205ENST00000474911 BBOX1O75936 387 aa16.8■□□□□ 0.28
RTN1-205ENST00000474911 HSP90B1P14625 803 aaKnown RBP16.8■□□□□ 0.28
RTN1-205ENST00000474911 HDAC1Q13547 482 aaPredicted RBP16.8■□□□□ 0.28
RTN1-205ENST00000474911 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
RTN1-205ENST00000474911 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
RTN1-205ENST00000474911 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
RTN1-205ENST00000474911 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
RTN1-205ENST00000474911 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
RTN1-205ENST00000474911 PCCAP05165 728 aaPredicted RBP16.79■□□□□ 0.28
RTN1-205ENST00000474911 GCKRQ14397 625 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
RTN1-205ENST00000474911 CWC25Q9NXE8 425 aaPredicted RBP16.79■□□□□ 0.28
RTN1-205ENST00000474911 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 UTYO14607 1347 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 MYH3P11055 1940 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 GRM8O00222 908 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 TOMM70O94826 608 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 GRAPQ13588 217 aa16.79■□□□□ 0.28
RTN1-205ENST00000474911 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
RTN1-205ENST00000474911 TMX4Q9H1E5 349 aaPredicted RBP16.79■□□□□ 0.28
RTN1-205ENST00000474911 IGHDP01880 384 aa16.78■□□□□ 0.28
RTN1-205ENST00000474911 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
RTN1-205ENST00000474911 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
RTN1-205ENST00000474911 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
RTN1-205ENST00000474911 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
RTN1-205ENST00000474911 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
RTN1-205ENST00000474911 ZNF277Q9NRM2 450 aaPredicted RBP16.78■□□□□ 0.28
RTN1-205ENST00000474911 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.27
RTN1-205ENST00000474911 SP8Q8IXZ3 490 aa16.77■□□□□ 0.27
RTN1-205ENST00000474911 RRAGCQ9HB90 399 aa16.77■□□□□ 0.27
RTN1-205ENST00000474911 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.27
RTN1-205ENST00000474911 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms