RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 VPS33BQ9H267 617 aa19.45■□□□□ 0.7
VARS-223ENST00000474643 CREBZFQ9NS37 354 aa19.45■□□□□ 0.7
VARS-223ENST00000474643 SNED1Q8TER0 1413 aa19.44■□□□□ 0.7
VARS-223ENST00000474643 JMYQ8N9B5 988 aa19.44■□□□□ 0.7
VARS-223ENST00000474643 MYD88Q99836 296 aa19.44■□□□□ 0.7
VARS-223ENST00000474643 ISCA1Q9BUE6 129 aa19.44■□□□□ 0.7
VARS-223ENST00000474643 IRS4O14654 1257 aaPredicted RBP19.43■□□□□ 0.7
VARS-223ENST00000474643 CCDC27Q2M243 656 aa19.43■□□□□ 0.7
VARS-223ENST00000474643 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
VARS-223ENST00000474643 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
VARS-223ENST00000474643 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
VARS-223ENST00000474643 LAMB2P55268 1798 aa19.42■□□□□ 0.7
VARS-223ENST00000474643 WWC1Q8IX03 1113 aa19.42■□□□□ 0.7
VARS-223ENST00000474643 BCL2L13Q9BXK5 485 aa19.42■□□□□ 0.7
VARS-223ENST00000474643 PHAXQ9H814 394 aaKnown RBP19.42■□□□□ 0.7
VARS-223ENST00000474643 ZNRF3Q9ULT6 936 aa19.42■□□□□ 0.7
VARS-223ENST00000474643 MAP1SQ66K74 1059 aaPredicted RBP19.41■□□□□ 0.7
VARS-223ENST00000474643 MIER1Q8N108 512 aa19.41■□□□□ 0.7
VARS-223ENST00000474643 C8orf58Q8NAV2 365 aa19.41■□□□□ 0.7
VARS-223ENST00000474643 TSR2Q969E8 191 aaKnown RBP19.41■□□□□ 0.7
VARS-223ENST00000474643 TMEM88BA6NKF7 163 aa19.4■□□□□ 0.7
VARS-223ENST00000474643 C6orf229H3BNL8 230 aa19.4■□□□□ 0.7
VARS-223ENST00000474643 NEXNQ0ZGT2 675 aa19.4■□□□□ 0.7
VARS-223ENST00000474643 CNTROBQ8N137 903 aa19.4■□□□□ 0.7
VARS-223ENST00000474643 CWC25Q9NXE8 425 aaPredicted RBP19.4■□□□□ 0.7
VARS-223ENST00000474643 NSFL1CQ9UNZ2 370 aaKnown RBP19.4■□□□□ 0.7
VARS-223ENST00000474643 G3V3G9 751 aa19.39■□□□□ 0.69
VARS-223ENST00000474643 TRIM28Q13263 835 aaKnown RBP19.39■□□□□ 0.69
VARS-223ENST00000474643 TNIP1Q15025 636 aa19.39■□□□□ 0.69
VARS-223ENST00000474643 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
VARS-223ENST00000474643 DCAF8Q5TAQ9 597 aa19.39■□□□□ 0.69
VARS-223ENST00000474643 CIAPIN1Q6FI81 312 aa19.39■□□□□ 0.69
VARS-223ENST00000474643 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.69
VARS-223ENST00000474643 CCDC191Q8NCU4 936 aa19.39■□□□□ 0.69
VARS-223ENST00000474643 RTFDC1Q9BY42 306 aaPredicted RBP19.39■□□□□ 0.69
VARS-223ENST00000474643 COL4A5P29400 1685 aa19.39■□□□□ 0.69
VARS-223ENST00000474643 PCNTO95613 3336 aa19.38■□□□□ 0.69
VARS-223ENST00000474643 EPS15P42566 896 aa19.38■□□□□ 0.69
VARS-223ENST00000474643 SCNN1DP51172 638 aa19.38■□□□□ 0.69
VARS-223ENST00000474643 KIAA2012Q0VF49 1180 aa19.38■□□□□ 0.69
VARS-223ENST00000474643 SF3B3Q15393 1217 aaKnown RBP19.38■□□□□ 0.69
VARS-223ENST00000474643 WASHC4Q2M389 1173 aa19.38■□□□□ 0.69
VARS-223ENST00000474643 CCDC152Q4G0S7 254 aa19.38■□□□□ 0.69
VARS-223ENST00000474643 USP50Q70EL3 339 aaPredicted RBP19.38■□□□□ 0.69
VARS-223ENST00000474643 ABT1Q9ULW3 272 aaKnown RBP19.38■□□□□ 0.69
VARS-223ENST00000474643 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
VARS-223ENST00000474643 PASKQ96RG2 1323 aa19.37■□□□□ 0.69
VARS-223ENST00000474643 RAD17O75943 681 aa19.37■□□□□ 0.69
VARS-223ENST00000474643 HSPA1AP0DMV8 641 aaKnown RBP19.37■□□□□ 0.69
VARS-223ENST00000474643 HSPA1BP0DMV9 641 aaKnown RBP19.37■□□□□ 0.69
VARS-223ENST00000474643 CELF1Q92879 486 aaKnown RBP19.37■□□□□ 0.69
VARS-223ENST00000474643 EYA3Q99504 573 aa19.37■□□□□ 0.69
VARS-223ENST00000474643 ADARB2Q9NS39 739 aaKnown RBP19.37■□□□□ 0.69
VARS-223ENST00000474643 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
VARS-223ENST00000474643 GMPSP49915 693 aaPredicted RBP19.36■□□□□ 0.69
VARS-223ENST00000474643 CXCL9Q07325 125 aa19.36■□□□□ 0.69
VARS-223ENST00000474643 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
VARS-223ENST00000474643 PAXIP1Q6ZW49 1069 aaPredicted RBP19.36■□□□□ 0.69
VARS-223ENST00000474643 WDR63Q8IWG1 891 aa19.36■□□□□ 0.69
VARS-223ENST00000474643 METTL22Q9BUU2 404 aaPredicted RBP19.36■□□□□ 0.69
VARS-223ENST00000474643 ANKIB1Q9P2G1 1089 aa19.36■□□□□ 0.69
VARS-223ENST00000474643 IL16Q14005 1332 aa19.35■□□□□ 0.69
VARS-223ENST00000474643 RIMBP2O15034 1052 aa19.35■□□□□ 0.69
VARS-223ENST00000474643 RPS8P62241 208 aaKnown RBP19.35■□□□□ 0.69
VARS-223ENST00000474643 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
VARS-223ENST00000474643 AIDAQ96BJ3 306 aa19.35■□□□□ 0.69
VARS-223ENST00000474643 GPRC5DQ9NZD1 345 aa19.35■□□□□ 0.69
VARS-223ENST00000474643 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
VARS-223ENST00000474643 PDE8AO60658 829 aa19.34■□□□□ 0.69
VARS-223ENST00000474643 ITGBL1O95965 494 aaPredicted RBP19.34■□□□□ 0.69
VARS-223ENST00000474643 PCCAP05165 728 aaPredicted RBP19.34■□□□□ 0.69
VARS-223ENST00000474643 CCDC85AQ96PX6 553 aaPredicted RBP19.34■□□□□ 0.69
VARS-223ENST00000474643 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
VARS-223ENST00000474643 PI4KAP2A4QPH2 592 aa19.33■□□□□ 0.68
VARS-223ENST00000474643 H7C1D1 291 aa19.33■□□□□ 0.68
VARS-223ENST00000474643 KSR2Q6VAB6 950 aa19.33■□□□□ 0.68
VARS-223ENST00000474643 PI4KAP1Q8N8J0 262 aa19.33■□□□□ 0.68
VARS-223ENST00000474643 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
VARS-223ENST00000474643 TAF1P21675 1872 aa19.33■□□□□ 0.68
VARS-223ENST00000474643 UFL1O94874 794 aa19.32■□□□□ 0.68
VARS-223ENST00000474643 GPSM2P81274 684 aa19.32■□□□□ 0.68
VARS-223ENST00000474643 ZC3H12CQ9C0D7 883 aaKnown RBP19.32■□□□□ 0.68
VARS-223ENST00000474643 DBNDD1Q9H9R9 158 aa19.32■□□□□ 0.68
VARS-223ENST00000474643 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
VARS-223ENST00000474643 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
VARS-223ENST00000474643 ANKRD18AQ8IVF6 992 aa19.31■□□□□ 0.68
VARS-223ENST00000474643 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
VARS-223ENST00000474643 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
VARS-223ENST00000474643 SEC31BQ9NQW1 1179 aa19.31■□□□□ 0.68
VARS-223ENST00000474643 GGA1Q9UJY5 639 aa19.31■□□□□ 0.68
VARS-223ENST00000474643 LRRC37AA6NMS7 1700 aa19.31■□□□□ 0.68
VARS-223ENST00000474643 GRM1Q13255 1194 aa19.3■□□□□ 0.68
VARS-223ENST00000474643 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
VARS-223ENST00000474643 DOK7Q18PE1 504 aa19.3■□□□□ 0.68
VARS-223ENST00000474643 DEFB115Q30KQ5 88 aa19.3■□□□□ 0.68
VARS-223ENST00000474643 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
VARS-223ENST00000474643 FANCIQ9NVI1 1328 aa19.29■□□□□ 0.68
VARS-223ENST00000474643 ECE2O60344 883 aa19.29■□□□□ 0.68
VARS-223ENST00000474643 VEGFBP49765 207 aa19.29■□□□□ 0.68
VARS-223ENST00000474643 CTSWP56202 376 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms