RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 MTFR1LQ9H019 292 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 C10orf71Q711Q0 1435 aa10.4□□□□□ -0.75
CNN3-205ENST00000474409 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
CNN3-205ENST00000474409 HCLS1P14317 486 aaPredicted RBP10.39□□□□□ -0.75
CNN3-205ENST00000474409 POLD1P28340 1107 aa10.39□□□□□ -0.75
CNN3-205ENST00000474409 B4GALNT3Q6L9W6 998 aa10.39□□□□□ -0.75
CNN3-205ENST00000474409 SYNE4Q8N205 404 aa10.39□□□□□ -0.75
CNN3-205ENST00000474409 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
CNN3-205ENST00000474409 KAZALD1Q96I82 304 aa10.39□□□□□ -0.75
CNN3-205ENST00000474409 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
CNN3-205ENST00000474409 FOXO4P98177 505 aa10.38□□□□□ -0.75
CNN3-205ENST00000474409 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
CNN3-205ENST00000474409 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
CNN3-205ENST00000474409 EPHA10Q5JZY3 1008 aa10.38□□□□□ -0.75
CNN3-205ENST00000474409 LMBR1LQ6UX01 489 aa10.38□□□□□ -0.75
CNN3-205ENST00000474409 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
CNN3-205ENST00000474409 RWDD1Q9H446 243 aaPredicted RBP10.38□□□□□ -0.75
CNN3-205ENST00000474409 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
CNN3-205ENST00000474409 MYO5AQ9Y4I1 1855 aaKnown RBP10.38□□□□□ -0.75
CNN3-205ENST00000474409 ATP8B2P98198 1209 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 MTX1Q13505 466 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 HDAC1Q13547 482 aaPredicted RBP10.37□□□□□ -0.75
CNN3-205ENST00000474409 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 FER1L6Q2WGJ9 1857 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 CCDC152Q4G0S7 254 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 TAF7LQ5H9L4 462 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 NLRP3Q96P20 1036 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
CNN3-205ENST00000474409 RTL9Q8NET4 1388 aa10.37□□□□□ -0.75
CNN3-205ENST00000474409 ANKRD18BA2A2Z9 1011 aa10.36□□□□□ -0.75
CNN3-205ENST00000474409 SOCS7O14512 581 aa10.36□□□□□ -0.75
CNN3-205ENST00000474409 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
CNN3-205ENST00000474409 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
CNN3-205ENST00000474409 SSH3Q8TE77 659 aa10.36□□□□□ -0.75
CNN3-205ENST00000474409 RPGRQ92834 1020 aaKnown RBP10.36□□□□□ -0.75
CNN3-205ENST00000474409 GREM2Q9H772 168 aa10.36□□□□□ -0.75
CNN3-205ENST00000474409 PSME4Q14997 1843 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
CNN3-205ENST00000474409 ITGA6P23229 1130 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
CNN3-205ENST00000474409 POLA2Q14181 598 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 CENPQQ7L2Z9 268 aaPredicted RBP10.35□□□□□ -0.75
CNN3-205ENST00000474409 SIRT2Q8IXJ6 389 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 TTLL11Q8NHH1 800 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 AKAP11Q9UKA4 1901 aa10.35□□□□□ -0.75
CNN3-205ENST00000474409 IGHDP01880 384 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 CSF1RP07333 972 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 PDE6BP35913 854 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 SF3B3Q15393 1217 aaKnown RBP10.34□□□□□ -0.75
CNN3-205ENST00000474409 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 KLHDC4Q8TBB5 520 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 GCC1Q96CN9 775 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 CDC5LQ99459 802 aaKnown RBP10.34□□□□□ -0.75
CNN3-205ENST00000474409 BRIP1Q9BX63 1249 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 SIL1Q9H173 461 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
CNN3-205ENST00000474409 EXOC6BQ9Y2D4 811 aa10.34□□□□□ -0.75
CNN3-205ENST00000474409 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 APBB1O00213 710 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 SURF6O75683 361 aaKnown RBP10.33□□□□□ -0.76
CNN3-205ENST00000474409 IGHMBP2P38935 993 aaKnown RBP10.33□□□□□ -0.76
CNN3-205ENST00000474409 RFX5P48382 616 aaPredicted RBP10.33□□□□□ -0.76
CNN3-205ENST00000474409 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.76
CNN3-205ENST00000474409 HSP90AB4PQ58FF6 505 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 DDX46Q7L014 1031 aaKnown RBP10.33□□□□□ -0.76
CNN3-205ENST00000474409 ZNF594Q96JF6 807 aaPredicted RBP10.33□□□□□ -0.76
CNN3-205ENST00000474409 MPHOSPH8Q99549 860 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 COPRSQ9NQ92 184 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 PA2G4Q9UQ80 394 aaKnown RBP10.33□□□□□ -0.76
CNN3-205ENST00000474409 SBF1O95248 1867 aa10.33□□□□□ -0.76
CNN3-205ENST00000474409 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
CNN3-205ENST00000474409 CRY2Q49AN0 593 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 ERC1Q8IUD2 1116 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 ANKRD18AQ8IVF6 992 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 RBM17Q96I25 401 aaKnown RBP10.32□□□□□ -0.76
CNN3-205ENST00000474409 BCL11AQ9H165 835 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 CNNM1Q9NRU3 951 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 ZNF609O15014 1411 aa10.32□□□□□ -0.76
CNN3-205ENST00000474409 MAST2Q6P0Q8 1798 aa10.31□□□□□ -0.76
CNN3-205ENST00000474409 TIAM2Q8IVF5 1701 aa10.31□□□□□ -0.76
CNN3-205ENST00000474409 GRAPQ13588 217 aa10.31□□□□□ -0.76
CNN3-205ENST00000474409 C2CD5Q86YS7 1000 aa10.31□□□□□ -0.76
CNN3-205ENST00000474409 SMC5Q8IY18 1101 aa10.31□□□□□ -0.76
CNN3-205ENST00000474409 GRAPLQ8TC17 118 aaPredicted RBP10.31□□□□□ -0.76
CNN3-205ENST00000474409 PPP1R1BQ9UD71 204 aaPredicted RBP10.31□□□□□ -0.76
CNN3-205ENST00000474409 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
CNN3-205ENST00000474409 H0YIN7 160 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 EYA2O00167 538 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 RAB11FIP3O75154 756 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 CIAO1O76071 339 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 NPR1P16066 1061 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 IL15P40933 162 aaPredicted RBP10.3□□□□□ -0.76
CNN3-205ENST00000474409 PTGER2P43116 358 aa10.3□□□□□ -0.76
CNN3-205ENST00000474409 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms