RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
PDE6B-208ENST00000474251 DBF4Q9UBU7 674 aaPredicted RBP23.5■■□□□ 1.35
PDE6B-208ENST00000474251 DPP8Q6V1X1 898 aaPredicted RBP23.49■■□□□ 1.35
PDE6B-208ENST00000474251 DDX46Q7L014 1031 aaKnown RBP23.49■■□□□ 1.35
PDE6B-208ENST00000474251 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
PDE6B-208ENST00000474251 ISCA1Q9BUE6 129 aa23.49■■□□□ 1.35
PDE6B-208ENST00000474251 MBIPQ9NS73 344 aa23.49■■□□□ 1.35
PDE6B-208ENST00000474251 PSME4Q14997 1843 aa23.48■■□□□ 1.35
PDE6B-208ENST00000474251 DUSP27Q5VZP5 1158 aa23.48■■□□□ 1.35
PDE6B-208ENST00000474251 ANKRD13DQ6ZTN6 518 aa23.48■■□□□ 1.35
PDE6B-208ENST00000474251 MPNDQ8N594 471 aa23.48■■□□□ 1.35
PDE6B-208ENST00000474251 ZNRF3Q9ULT6 936 aa23.48■■□□□ 1.35
PDE6B-208ENST00000474251 SCN9AQ15858 1988 aa23.47■■□□□ 1.35
PDE6B-208ENST00000474251 RASSF10A6NK89 507 aa23.47■■□□□ 1.35
PDE6B-208ENST00000474251 ZNF853P0CG23 659 aa23.47■■□□□ 1.35
PDE6B-208ENST00000474251 CXCL9Q07325 125 aa23.47■■□□□ 1.35
PDE6B-208ENST00000474251 KIAA2012Q0VF49 1180 aa23.47■■□□□ 1.35
PDE6B-208ENST00000474251 USP50Q70EL3 339 aaPredicted RBP23.47■■□□□ 1.35
PDE6B-208ENST00000474251 FOXN1O15353 648 aa23.46■■□□□ 1.35
PDE6B-208ENST00000474251 SPEF2Q9C093 1822 aa23.46■■□□□ 1.35
PDE6B-208ENST00000474251 HYPKQ9NX55 129 aa23.46■■□□□ 1.35
PDE6B-208ENST00000474251 GPRC5DQ9NZD1 345 aa23.46■■□□□ 1.35
PDE6B-208ENST00000474251 ATP5J2-PTCD1G3V325 749 aa23.45■■□□□ 1.34
PDE6B-208ENST00000474251 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
PDE6B-208ENST00000474251 CACNA1FO60840 1977 aa23.44■■□□□ 1.34
PDE6B-208ENST00000474251 FMR1Q06787 632 aaKnown RBP eCLIP23.44■■□□□ 1.34
PDE6B-208ENST00000474251 DEFB115Q30KQ5 88 aa23.44■■□□□ 1.34
PDE6B-208ENST00000474251 FAM89AQ96GI7 184 aa23.44■■□□□ 1.34
PDE6B-208ENST00000474251 ADARB2Q9NS39 739 aaKnown RBP23.44■■□□□ 1.34
PDE6B-208ENST00000474251 CDHR2Q9BYE9 1310 aa23.43■■□□□ 1.34
PDE6B-208ENST00000474251 SF3B3Q15393 1217 aaKnown RBP23.43■■□□□ 1.34
PDE6B-208ENST00000474251 CIAPIN1Q6FI81 312 aa23.43■■□□□ 1.34
PDE6B-208ENST00000474251 IFT57Q9NWB7 429 aa23.43■■□□□ 1.34
PDE6B-208ENST00000474251 APAF1O14727 1248 aa23.42■■□□□ 1.34
PDE6B-208ENST00000474251 CAPN15O75808 1086 aa23.42■■□□□ 1.34
PDE6B-208ENST00000474251 GMPSP49915 693 aaPredicted RBP23.42■■□□□ 1.34
PDE6B-208ENST00000474251 ABT1Q9ULW3 272 aaKnown RBP23.42■■□□□ 1.34
PDE6B-208ENST00000474251 YDJCA8MPS7 323 aa23.41■■□□□ 1.34
PDE6B-208ENST00000474251 TRIM28Q13263 835 aaKnown RBP23.41■■□□□ 1.34
PDE6B-208ENST00000474251 CELF1Q92879 486 aaKnown RBP23.41■■□□□ 1.34
PDE6B-208ENST00000474251 WDR33Q9C0J8 1336 aaKnown RBP23.4■■□□□ 1.34
PDE6B-208ENST00000474251 TRAF5O00463 557 aa23.4■■□□□ 1.34
PDE6B-208ENST00000474251 RAD17O75943 681 aa23.4■■□□□ 1.34
PDE6B-208ENST00000474251 WBP1LQ9NX94 342 aa23.4■■□□□ 1.34
PDE6B-208ENST00000474251 GNAI1P63096 354 aa23.39■■□□□ 1.33
PDE6B-208ENST00000474251 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
PDE6B-208ENST00000474251 AIDAQ96BJ3 306 aa23.39■■□□□ 1.33
PDE6B-208ENST00000474251 PHAXQ9H814 394 aaKnown RBP23.39■■□□□ 1.33
PDE6B-208ENST00000474251 PRDM10Q9NQV6 1147 aa23.39■■□□□ 1.33
PDE6B-208ENST00000474251 IRS4O14654 1257 aaPredicted RBP23.38■■□□□ 1.33
PDE6B-208ENST00000474251 CTCFP49711 727 aaPredicted RBP23.38■■□□□ 1.33
PDE6B-208ENST00000474251 CALD1Q05682 793 aaKnown RBP23.38■■□□□ 1.33
PDE6B-208ENST00000474251 GOLGA2Q08379 1002 aa23.38■■□□□ 1.33
PDE6B-208ENST00000474251 TNIP1Q15025 636 aa23.38■■□□□ 1.33
PDE6B-208ENST00000474251 CST9Q5W186 159 aa23.38■■□□□ 1.33
PDE6B-208ENST00000474251 RIC3Q7Z5B4 369 aa23.37■■□□□ 1.33
PDE6B-208ENST00000474251 BCL2L13Q9BXK5 485 aa23.37■■□□□ 1.33
PDE6B-208ENST00000474251 ELL2O00472 640 aaPredicted RBP23.36■■□□□ 1.33
PDE6B-208ENST00000474251 TRPM4Q8TD43 1214 aa23.36■■□□□ 1.33
PDE6B-208ENST00000474251 SHTN1A0MZ66 631 aa23.35■■□□□ 1.33
PDE6B-208ENST00000474251 GPSM2P81274 684 aa23.35■■□□□ 1.33
PDE6B-208ENST00000474251 WASHC4Q2M389 1173 aa23.35■■□□□ 1.33
PDE6B-208ENST00000474251 ZBTB38Q8NAP3 1195 aaPredicted RBP23.35■■□□□ 1.33
PDE6B-208ENST00000474251 POLLQ9UGP5 575 aa23.35■■□□□ 1.33
PDE6B-208ENST00000474251 PGAP2Q9UHJ9 254 aa23.35■■□□□ 1.33
PDE6B-208ENST00000474251 NSFL1CQ9UNZ2 370 aaKnown RBP23.35■■□□□ 1.33
PDE6B-208ENST00000474251 TLL2Q9Y6L7 1015 aa23.35■■□□□ 1.33
PDE6B-208ENST00000474251 ZNF646O15015 1829 aaPredicted RBP23.35■■□□□ 1.33
PDE6B-208ENST00000474251 HIRAP54198 1017 aaPredicted RBP23.34■■□□□ 1.33
PDE6B-208ENST00000474251 C8orf58Q8NAV2 365 aa23.34■■□□□ 1.33
PDE6B-208ENST00000474251 CAPNS2Q96L46 248 aa23.34■■□□□ 1.33
PDE6B-208ENST00000474251 DBNDD1Q9H9R9 158 aa23.34■■□□□ 1.33
PDE6B-208ENST00000474251 MAP2K1Q02750 393 aaPredicted RBP23.33■■□□□ 1.33
PDE6B-208ENST00000474251 MYD88Q99836 296 aa23.33■■□□□ 1.33
PDE6B-208ENST00000474251 GLIS2Q9BZE0 524 aaPredicted RBP23.33■■□□□ 1.33
PDE6B-208ENST00000474251 CNOT7Q9UIV1 285 aaKnown RBP23.33■■□□□ 1.33
PDE6B-208ENST00000474251 PSMD14O00487 310 aa23.32■■□□□ 1.32
PDE6B-208ENST00000474251 HSPA8P11142 646 aaKnown RBP23.32■■□□□ 1.32
PDE6B-208ENST00000474251 ECE1P42892 770 aa23.32■■□□□ 1.32
PDE6B-208ENST00000474251 LBX1P52954 281 aa23.32■■□□□ 1.32
PDE6B-208ENST00000474251 RPS8P62241 208 aaKnown RBP23.32■■□□□ 1.32
PDE6B-208ENST00000474251 CYP4F22Q6NT55 531 aa23.32■■□□□ 1.32
PDE6B-208ENST00000474251 MICALL2Q8IY33 904 aa23.32■■□□□ 1.32
PDE6B-208ENST00000474251 ZC3H15Q8WU90 426 aaKnown RBP23.32■■□□□ 1.32
PDE6B-208ENST00000474251 CASP8AP2Q9UKL3 1982 aa23.31■■□□□ 1.32
PDE6B-208ENST00000474251 C6orf229H3BNL8 230 aa23.31■■□□□ 1.32
PDE6B-208ENST00000474251 RIMBP2O15034 1052 aa23.31■■□□□ 1.32
PDE6B-208ENST00000474251 PCCAP05165 728 aaPredicted RBP23.31■■□□□ 1.32
PDE6B-208ENST00000474251 PAXIP1Q6ZW49 1069 aaPredicted RBP23.31■■□□□ 1.32
PDE6B-208ENST00000474251 CCDC191Q8NCU4 936 aa23.31■■□□□ 1.32
PDE6B-208ENST00000474251 SEC31BQ9NQW1 1179 aa23.31■■□□□ 1.32
PDE6B-208ENST00000474251 ZBTB12Q9Y330 459 aaPredicted RBP23.31■■□□□ 1.32
PDE6B-208ENST00000474251 RTL9Q8NET4 1388 aa23.3■■□□□ 1.32
PDE6B-208ENST00000474251 ECE2O60344 883 aa23.3■■□□□ 1.32
PDE6B-208ENST00000474251 CELF2O95319 508 aaKnown RBP23.3■■□□□ 1.32
PDE6B-208ENST00000474251 CCDC30Q5VVM6 783 aa23.3■■□□□ 1.32
PDE6B-208ENST00000474251 TBC1D16Q8TBP0 767 aa23.3■■□□□ 1.32
PDE6B-208ENST00000474251 DPF2Q92785 391 aa23.3■■□□□ 1.32
PDE6B-208ENST00000474251 GPR101Q96P66 508 aaPredicted RBP23.3■■□□□ 1.32
PDE6B-208ENST00000474251 EYA3Q99504 573 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms