RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 KDM5CP41229 1560 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 FAM196AQ6ZSG2 479 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 SMARCE1Q969G3 411 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 KRT23Q9C075 422 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 TNMDQ9H2S6 317 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 PTPRTO14522 1441 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 HMGN5P82970 282 aaKnown RBP14.3□□□□□ -0.12
IRF1-208ENST00000472045 DPP8Q6V1X1 898 aaPredicted RBP14.3□□□□□ -0.12
IRF1-208ENST00000472045 RNF214Q8ND24 703 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 ESR2Q92731 530 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 ZNF496Q96IT1 587 aaPredicted RBP14.3□□□□□ -0.12
IRF1-208ENST00000472045 HMG20BQ9P0W2 317 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 ITGA6P23229 1130 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 TRAF1Q13077 416 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 TRIM5Q9C035 493 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 NPC1L1Q9UHC9 1359 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 TTC22Q5TAA0 569 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 MSL1Q68DK7 614 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 BICC1Q9H694 974 aaKnown RBP14.29□□□□□ -0.12
IRF1-208ENST00000472045 PAG1Q9NWQ8 432 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 JAG2Q9Y219 1238 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
IRF1-208ENST00000472045 PHKG2P15735 406 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
IRF1-208ENST00000472045 CCDC144CPQ8IYA2 1237 aa14.29□□□□□ -0.12
IRF1-208ENST00000472045 IARSP41252 1262 aaKnown RBP14.28□□□□□ -0.12
IRF1-208ENST00000472045 TFCP2Q12800 502 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 GPR162Q16538 588 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 FERMT3Q86UX7 667 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 PER1O15534 1290 aaPredicted RBP14.28□□□□□ -0.12
IRF1-208ENST00000472045 NEK1Q96PY6 1258 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 DENND2AQ9ULE3 1009 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 WTAPQ15007 396 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 KRT27Q7Z3Y8 459 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 CARD10Q9BWT7 1032 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 CNNM2Q9H8M5 875 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 CCDC39Q9UFE4 941 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
IRF1-208ENST00000472045 MCM5P33992 734 aa14.27□□□□□ -0.12
IRF1-208ENST00000472045 METAP2P50579 478 aaKnown RBP eCLIP14.27□□□□□ -0.12
IRF1-208ENST00000472045 BMP2KLQ5H9B9 411 aa14.27□□□□□ -0.12
IRF1-208ENST00000472045 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.12
IRF1-208ENST00000472045 LIMCH1Q9UPQ0 1083 aa14.27□□□□□ -0.12
IRF1-208ENST00000472045 TRIM37O94972 964 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 GNAT2P19087 354 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 ALDH1B1P30837 517 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 TSPY26PQ9H489 355 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 SERPINC1P01008 464 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.13
IRF1-208ENST00000472045 GUCY1B3Q02153 619 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
IRF1-208ENST00000472045 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.13
IRF1-208ENST00000472045 MCMDC2Q4G0Z9 681 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 HIBADHP31937 336 aaKnown RBP14.27□□□□□ -0.13
IRF1-208ENST00000472045 PDE6BP35913 854 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 MAGEB6Q8N7X4 407 aa14.27□□□□□ -0.13
IRF1-208ENST00000472045 IFIT1BQ5T764 474 aaKnown RBP14.26□□□□□ -0.13
IRF1-208ENST00000472045 MIGA1Q8NAN2 632 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 TRAK2O60296 914 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 INSRP06213 1382 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 PDE1AP54750 535 aa14.26□□□□□ -0.13
IRF1-208ENST00000472045 CHL1O00533 1208 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 PPP1R12BO60237 982 aaPredicted RBP14.25□□□□□ -0.13
IRF1-208ENST00000472045 EYA2O00167 538 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 RDXP35241 583 aaKnown RBP14.25□□□□□ -0.13
IRF1-208ENST00000472045 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 NIM1KQ8IY84 436 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
IRF1-208ENST00000472045 G2E3Q7L622 706 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 ZNF408Q9H9D4 720 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 NFKBIBQ15653 356 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 TBC1D9Q6ZT07 1266 aa14.25□□□□□ -0.13
IRF1-208ENST00000472045 RNF113AO15541 343 aaKnown RBP14.24□□□□□ -0.13
IRF1-208ENST00000472045 NUCB1Q02818 461 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 RAB11FIP4Q86YS3 637 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 SAMM50Q9Y512 469 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 MAST3O60307 1309 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 ABCC3O15438 1527 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 GNAQP50148 359 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 PLS1Q14651 629 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 TTLL5Q6EMB2 1281 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 TTC6Q86TZ1 520 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 TTC41PQ6P2S7 1318 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 DNAI2Q9GZS0 605 aa14.24□□□□□ -0.13
IRF1-208ENST00000472045 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
IRF1-208ENST00000472045 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 CEP85Q6P2H3 762 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 UBA5Q9GZZ9 404 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms