RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 MAP7D1Q3KQU3 841 aa4.85□□□□□ -1.63
SCN3A-207ENST00000471697 TTC9Q92623 222 aa4.85□□□□□ -1.63
SCN3A-207ENST00000471697 CEP63Q96MT8 703 aa4.85□□□□□ -1.63
SCN3A-207ENST00000471697 DNAJB12Q9NXW2 375 aaKnown RBP4.85□□□□□ -1.63
SCN3A-207ENST00000471697 RBM47A0AV96 593 aaKnown RBP4.84□□□□□ -1.63
SCN3A-207ENST00000471697 F8W735 103 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-207ENST00000471697 BACH1O14867 736 aa4.84□□□□□ -1.63
SCN3A-207ENST00000471697 DEAF1O75398 565 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-207ENST00000471697 FBLN7Q53RD9 439 aa4.84□□□□□ -1.63
SCN3A-207ENST00000471697 C1orf53Q5VUE5 145 aa4.84□□□□□ -1.63
SCN3A-207ENST00000471697 CCER1Q8TC90 406 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-207ENST00000471697 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
SCN3A-207ENST00000471697 ANKIB1Q9P2G1 1089 aa4.84□□□□□ -1.63
SCN3A-207ENST00000471697 TBC1D2BQ9UPU7 963 aa4.84□□□□□ -1.63
SCN3A-207ENST00000471697 CADPSQ9ULU8 1353 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 EPHA4P54764 986 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 EIF4G2P78344 907 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCN3A-207ENST00000471697 TBC1D8BQ0IIM8 1120 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 PCSK7Q16549 785 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 SND1Q7KZF4 910 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCN3A-207ENST00000471697 WFDC8Q8IUA0 241 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 FAM9AQ8IZU1 332 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-207ENST00000471697 CWC22Q9HCG8 908 aaKnown RBP4.83□□□□□ -1.64
SCN3A-207ENST00000471697 USTQ9Y2C2 406 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 COG6Q9Y2V7 657 aa4.83□□□□□ -1.64
SCN3A-207ENST00000471697 PRR19A6NJB7 356 aa4.82□□□□□ -1.64
SCN3A-207ENST00000471697 HIRAP54198 1017 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-207ENST00000471697 POTEAQ6S8J7 498 aa4.82□□□□□ -1.64
SCN3A-207ENST00000471697 RHPN1Q8TCX5 695 aa4.82□□□□□ -1.64
SCN3A-207ENST00000471697 LPIN3Q9BQK8 851 aa4.82□□□□□ -1.64
SCN3A-207ENST00000471697 GDPD2Q9HCC8 539 aa4.82□□□□□ -1.64
SCN3A-207ENST00000471697 STOML1Q9UBI4 398 aa4.82□□□□□ -1.64
SCN3A-207ENST00000471697 ALX3O95076 343 aa4.81□□□□□ -1.64
SCN3A-207ENST00000471697 NFIAQ12857 509 aa4.81□□□□□ -1.64
SCN3A-207ENST00000471697 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
SCN3A-207ENST00000471697 CERS3Q8IU89 383 aa4.81□□□□□ -1.64
SCN3A-207ENST00000471697 SPATA32Q96LK8 384 aa4.81□□□□□ -1.64
SCN3A-207ENST00000471697 PCDHGA11Q9Y5H2 935 aa4.81□□□□□ -1.64
SCN3A-207ENST00000471697 SERTM1A2A2V5 107 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 SFI1A8K8P3 1242 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 SPOCD1Q6ZMY3 1216 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 CBLL1Q75N03 491 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 PLPP7Q8NBV4 271 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 ASIC4Q96FT7 647 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 HSH2DQ96JZ2 352 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 GSX2Q9BZM3 304 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 IGFLR1Q9H665 355 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 SRA1Q9HD15 236 aaKnown RBP4.8□□□□□ -1.64
SCN3A-207ENST00000471697 IVNS1ABPQ9Y6Y0 642 aa4.8□□□□□ -1.64
SCN3A-207ENST00000471697 TAF7LQ5H9L4 462 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 FAM35AQ86V20 835 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 SLC9A9Q8IVB4 645 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 DCAF11Q8TEB1 546 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 SUSD3Q96L08 255 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 DRC1Q96MC2 740 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 KIAA1522Q9P206 1035 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-207ENST00000471697 ZNF232Q9UNY5 417 aa4.79□□□□□ -1.64
SCN3A-207ENST00000471697 DHX15O43143 795 aaKnown RBP4.78□□□□□ -1.64
SCN3A-207ENST00000471697 MAP3K6O95382 1288 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 ITGB5P18084 799 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 ABL2P42684 1182 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 VAC14Q08AM6 782 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 PERM1Q5SV97 790 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 SH3PXD2AQ5TCZ1 1133 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 RNF43Q68DV7 783 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 ANKRD13AQ8IZ07 590 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 ABI1Q8IZP0 508 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 PBXIP1Q96AQ6 731 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 DBNDD2Q9BQY9 259 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 ZNF358Q9NW07 568 aa4.78□□□□□ -1.64
SCN3A-207ENST00000471697 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-207ENST00000471697 ARID4BQ4LE39 1312 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-207ENST00000471697 SMARCA5O60264 1052 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-207ENST00000471697 NCLP19338 710 aaKnown RBP4.77□□□□□ -1.65
SCN3A-207ENST00000471697 SRPK2P78362 688 aaKnown RBP4.77□□□□□ -1.65
SCN3A-207ENST00000471697 PLAURQ03405 335 aa4.77□□□□□ -1.65
SCN3A-207ENST00000471697 MAP4K3Q8IVH8 894 aa4.77□□□□□ -1.65
SCN3A-207ENST00000471697 ARMC10Q8N2F6 343 aa4.77□□□□□ -1.65
SCN3A-207ENST00000471697 ZNF280CQ8ND82 737 aa4.77□□□□□ -1.65
SCN3A-207ENST00000471697 TRPM4Q8TD43 1214 aa4.77□□□□□ -1.65
SCN3A-207ENST00000471697 C8orf37Q96NL8 207 aa4.77□□□□□ -1.65
SCN3A-207ENST00000471697 UBL7Q96S82 380 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-207ENST00000471697 CPB1P15086 417 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 JUNBP17275 347 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-207ENST00000471697 NFKB1P19838 968 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 CCINQ13939 588 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 UVSSAQ2YD98 709 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 BTLAQ7Z6A9 289 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 TXNDC2Q86VQ3 553 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 MRRFQ96E11 262 aaKnown RBP4.76□□□□□ -1.65
SCN3A-207ENST00000471697 CALR3Q96L12 384 aaKnown RBP4.76□□□□□ -1.65
SCN3A-207ENST00000471697 PNMA5Q96PV4 448 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 C7orf69Q9H7B7 122 aa4.76□□□□□ -1.65
SCN3A-207ENST00000471697 DBX1A6NMT0 343 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 GLB1P16278 677 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 ERCC3P19447 782 aa4.75□□□□□ -1.65
SCN3A-207ENST00000471697 PSMA6P60900 246 aaKnown RBP4.75□□□□□ -1.65
SCN3A-207ENST00000471697 HIF1AQ16665 826 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms