RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TRIM37O94972 964 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 NTSR2O95665 410 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 IFIT2P09913 472 aaKnown RBP11.51□□□□□ -0.57
VPS52-216ENST00000471309 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
VPS52-216ENST00000471309 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
VPS52-216ENST00000471309 CCDC57Q2TAC2 916 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 AACSQ86V21 672 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 LRRC4BQ9NT99 713 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 RTL9Q8NET4 1388 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 ZNF609O15014 1411 aa11.51□□□□□ -0.57
VPS52-216ENST00000471309 EYA2O00167 538 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 IFIT5Q13325 482 aaKnown RBP11.5□□□□□ -0.57
VPS52-216ENST00000471309 TSHZ3Q63HK5 1081 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 CASC1Q6TDU7 716 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 ATG9AQ7Z3C6 839 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 EAF2Q96CJ1 260 aaPredicted RBP11.5□□□□□ -0.57
VPS52-216ENST00000471309 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 ECHDC1Q9NTX5 307 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 RIC1Q4ADV7 1423 aa11.5□□□□□ -0.57
VPS52-216ENST00000471309 ERC2O15083 957 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 ZPR1O75312 459 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 GLRX3O76003 335 aaKnown RBP11.49□□□□□ -0.57
VPS52-216ENST00000471309 TFCP2Q12800 502 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 SYNE4Q8N205 404 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.49□□□□□ -0.57
VPS52-216ENST00000471309 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
VPS52-216ENST00000471309 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
VPS52-216ENST00000471309 PLSCR1O15162 318 aa11.48□□□□□ -0.57
VPS52-216ENST00000471309 MFAP1P55081 439 aaKnown RBP11.48□□□□□ -0.57
VPS52-216ENST00000471309 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
VPS52-216ENST00000471309 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
VPS52-216ENST00000471309 GREM2Q9H772 168 aa11.48□□□□□ -0.57
VPS52-216ENST00000471309 ITGA6P23229 1130 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 SSFA2P28290 1259 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 TXNRD1Q16881 649 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 TBC1D9BQ66K14 1250 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 AMIGO3Q86WK7 504 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
VPS52-216ENST00000471309 NYXQ9GZU5 481 aa11.47□□□□□ -0.57
VPS52-216ENST00000471309 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
VPS52-216ENST00000471309 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
VPS52-216ENST00000471309 SPEF2Q9C093 1822 aa11.46□□□□□ -0.57
VPS52-216ENST00000471309 A0A1B0GUL6 1792 aa11.46□□□□□ -0.57
VPS52-216ENST00000471309 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
VPS52-216ENST00000471309 RFC4P35249 363 aa11.46□□□□□ -0.57
VPS52-216ENST00000471309 LRRC24Q50LG9 513 aa11.46□□□□□ -0.57
VPS52-216ENST00000471309 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
VPS52-216ENST00000471309 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
VPS52-216ENST00000471309 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.57
VPS52-216ENST00000471309 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.58
VPS52-216ENST00000471309 ABCC12Q96J65 1359 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
VPS52-216ENST00000471309 FAM177BA6PVY3 158 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 PHF14O94880 888 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
VPS52-216ENST00000471309 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
VPS52-216ENST00000471309 CCDC152Q4G0S7 254 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 SLC10A5Q5PT55 438 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 PROM2Q8N271 834 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 IPO9Q96P70 1041 aaKnown RBP11.45□□□□□ -0.58
VPS52-216ENST00000471309 CCDC85AQ96PX6 553 aaPredicted RBP11.45□□□□□ -0.58
VPS52-216ENST00000471309 SETDB2Q96T68 719 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
VPS52-216ENST00000471309 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
VPS52-216ENST00000471309 RFX7Q2KHR2 1363 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 APBA3O96018 575 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 ATP5JP18859 108 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 CHMLP26374 656 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 ERFEQ4G0M1 354 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 RILPL2Q969X0 211 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 AKAP2Q9Y2D5 859 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 RIPOR2Q9Y4F9 1068 aa11.44□□□□□ -0.58
VPS52-216ENST00000471309 A0A1B0GUL7 405 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 REC8O95072 547 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 SF3B3Q15393 1217 aaKnown RBP11.43□□□□□ -0.58
VPS52-216ENST00000471309 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 BICDL1Q6ZP65 573 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 NBPF5PQ86XG9 351 aaPredicted RBP11.43□□□□□ -0.58
VPS52-216ENST00000471309 VGLL2Q8N8G2 317 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 EVI5LQ96CN4 794 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 DBNDD2Q9BQY9 259 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 COL4A1P02462 1669 aa11.43□□□□□ -0.58
VPS52-216ENST00000471309 MROH5Q6ZUA9 1318 aa11.42□□□□□ -0.58
VPS52-216ENST00000471309 MAP4K4O95819 1239 aaPredicted RBP11.42□□□□□ -0.58
VPS52-216ENST00000471309 GYS1P13807 737 aa11.42□□□□□ -0.58
VPS52-216ENST00000471309 METTL24Q5JXM2 366 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms