RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 HMOX1P09601 288 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 XPCQ01831 940 aaPredicted RBP7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 CALD1Q05682 793 aaKnown RBP7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 NFE2L2Q16236 605 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 SULT6B1Q6IMI4 303 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 TRIM67Q6ZTA4 783 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 BRINP3Q76B58 766 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 DZIP3Q86Y13 1208 aaKnown RBP7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 MYH16Q9H6N6 1097 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 RRP7AQ9Y3A4 280 aaKnown RBP7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 ARID5BQ14865 1188 aa7.89□□□□□ -1.15
SMNDC1-204ENST00000471297 ARHGEF25Q86VW2 580 aa7.89□□□□□ -1.15
SMNDC1-204ENST00000471297 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
SMNDC1-204ENST00000471297 PCDHB9Q9Y5E1 797 aa7.89□□□□□ -1.15
SMNDC1-204ENST00000471297 SLIT3O75094 1523 aa7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 SOS2Q07890 1332 aaPredicted RBP7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 SPATA31A3Q5VYP0 1347 aa7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 IGSF1Q8N6C5 1336 aa7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 CT47B1P0C2W7 299 aaPredicted RBP7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 TRMT44Q8IYL2 757 aaKnown RBP7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 CYP4X1Q8N118 509 aa7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 MPNDQ8N594 471 aa7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 SNIP1Q8TAD8 396 aaKnown RBP7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 TRPM3Q9HCF6 1732 aaPredicted RBP7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 NFAT5O94916 1531 aa7.88□□□□□ -1.15
SMNDC1-204ENST00000471297 TNS3Q68CZ2 1445 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 XIRP1Q702N8 1843 aaKnown RBP7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PEAK1Q9H792 1746 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 TTC24A2A3L6 582 aaPredicted RBP7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PRR20EP86478 221 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PRR20CP86479 221 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PRR20DP86480 221 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PRR20BP86481 221 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PRR20AP86496 221 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 SEMA3FQ13275 785 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PHACTR3Q96KR7 559 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 CDK15Q96Q40 435 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PDZRN3Q9UPQ7 1066 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 PXDNQ92626 1479 aa7.87□□□□□ -1.15
SMNDC1-204ENST00000471297 MARF1Q9Y4F3 1742 aaKnown RBP7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 KDRP35968 1356 aa7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 HTATSF1O43719 755 aaKnown RBP7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 ALDH1A1P00352 501 aa7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 RRP1P56182 461 aaKnown RBP7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 HDGFL1Q5TGJ6 251 aa7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 VASH1Q7L8A9 365 aaPredicted RBP7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 GAS2L2Q8NHY3 880 aa7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 DDX17Q92841 729 aaKnown RBP7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 TOR4AQ9NXH8 423 aa7.86□□□□□ -1.15
SMNDC1-204ENST00000471297 ZBTB7CA1YPR0 619 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 SOX11P35716 441 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 GRM5P41594 1212 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 GNAI1P63096 354 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 AEBP1Q8IUX7 1158 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 ZNF592Q92610 1267 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 LTV1Q96GA3 475 aaPredicted RBP7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 ALG2Q9H553 416 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 CEP126Q9P2H0 1117 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 CDV3Q9UKY7 258 aaKnown RBP7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 TLL2Q9Y6L7 1015 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 ALS2Q96Q42 1657 aa7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 PHRF1Q9P1Y6 1649 aaKnown RBP7.85□□□□□ -1.15
SMNDC1-204ENST00000471297 RGPD1P0DJD0 1748 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 J3QL48 77 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 GFRA3O60609 400 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 ZC3H6P61129 1189 aaKnown RBP7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 ANKRD24Q8TF21 1146 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 KCTD15Q96SI1 283 aaPredicted RBP7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 IFT57Q9NWB7 429 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 PPP4R2Q9NY27 417 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 MAP4K5Q9Y4K4 846 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 LTBP4Q8N2S1 1624 aa7.84□□□□□ -1.15
SMNDC1-204ENST00000471297 CPDO75976 1380 aa7.84□□□□□ -1.16
SMNDC1-204ENST00000471297 TOM1O60784 492 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 GIGYF1O75420 1035 aaPredicted RBP7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 ZNF853P0CG23 659 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 MTHFSDQ2M296 383 aaKnown RBP7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 AMOTQ4VCS5 1084 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 RTF1Q92541 710 aaKnown RBP7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 LRRC59Q96AG4 307 aaKnown RBP7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 WASF2Q9Y6W5 498 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 MED1Q15648 1581 aaPredicted RBP7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 ABCC6O95255 1503 aa7.83□□□□□ -1.16
SMNDC1-204ENST00000471297 FANCIQ9NVI1 1328 aa7.82□□□□□ -1.16
SMNDC1-204ENST00000471297 IRX6P78412 446 aaPredicted RBP7.82□□□□□ -1.16
SMNDC1-204ENST00000471297 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
SMNDC1-204ENST00000471297 PLEKHO1Q53GL0 409 aaPredicted RBP7.82□□□□□ -1.16
SMNDC1-204ENST00000471297 CALR3Q96L12 384 aaKnown RBP7.82□□□□□ -1.16
SMNDC1-204ENST00000471297 GNAT3A8MTJ3 354 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 ADH1CP00326 375 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 SMPD1P17405 629 aa7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 RARSP54136 660 aaKnown RBP7.81□□□□□ -1.16
SMNDC1-204ENST00000471297 EXOSC9Q06265 439 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms