RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 BPHLQ86WA6 291 aaPredicted RBP10.57□□□□□ -0.72
LDHB-206ENST00000470985 NGDNQ8NEJ9 315 aaKnown RBP10.57□□□□□ -0.72
LDHB-206ENST00000470985 KDM2BQ8NHM5 1336 aa10.57□□□□□ -0.72
LDHB-206ENST00000470985 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
LDHB-206ENST00000470985 CNTNAP1P78357 1384 aa10.56□□□□□ -0.72
LDHB-206ENST00000470985 LILRB3O75022 631 aa10.56□□□□□ -0.72
LDHB-206ENST00000470985 ARID5BQ14865 1188 aa10.56□□□□□ -0.72
LDHB-206ENST00000470985 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
LDHB-206ENST00000470985 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
LDHB-206ENST00000470985 PKD1L3Q7Z443 1732 aa10.55□□□□□ -0.72
LDHB-206ENST00000470985 ZBTB7CA1YPR0 619 aa10.55□□□□□ -0.72
LDHB-206ENST00000470985 SLC27A3Q5K4L6 730 aa10.55□□□□□ -0.72
LDHB-206ENST00000470985 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
LDHB-206ENST00000470985 MPNDQ8N594 471 aa10.55□□□□□ -0.72
LDHB-206ENST00000470985 QPCTQ16769 361 aa10.54□□□□□ -0.72
LDHB-206ENST00000470985 RPGRIP1LQ68CZ1 1315 aa10.54□□□□□ -0.72
LDHB-206ENST00000470985 DLL1O00548 723 aa10.53□□□□□ -0.72
LDHB-206ENST00000470985 PRAM1Q96QH2 718 aa10.53□□□□□ -0.72
LDHB-206ENST00000470985 CDCA7Q9BWT1 371 aaPredicted RBP10.53□□□□□ -0.72
LDHB-206ENST00000470985 MAP10Q9P2G4 905 aa10.53□□□□□ -0.72
LDHB-206ENST00000470985 BCS1LQ9Y276 419 aa10.53□□□□□ -0.72
LDHB-206ENST00000470985 PIK3C2AO00443 1686 aa10.53□□□□□ -0.72
LDHB-206ENST00000470985 EXOC5O00471 708 aa10.52□□□□□ -0.73
LDHB-206ENST00000470985 VEGFBP49765 207 aa10.52□□□□□ -0.73
LDHB-206ENST00000470985 SMIM5Q71RC9 77 aa10.52□□□□□ -0.73
LDHB-206ENST00000470985 TRIM47Q96LD4 638 aa10.52□□□□□ -0.73
LDHB-206ENST00000470985 QRICH2Q9H0J4 1663 aa10.52□□□□□ -0.73
LDHB-206ENST00000470985 F12P00748 615 aaPredicted RBP10.51□□□□□ -0.73
LDHB-206ENST00000470985 SKIV2LQ15477 1246 aaKnown RBP10.51□□□□□ -0.73
LDHB-206ENST00000470985 TREML4Q6UXN2 200 aa10.51□□□□□ -0.73
LDHB-206ENST00000470985 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
LDHB-206ENST00000470985 KDM4CQ9H3R0 1056 aa10.51□□□□□ -0.73
LDHB-206ENST00000470985 ABCC6O95255 1503 aa10.51□□□□□ -0.73
LDHB-206ENST00000470985 WDR17Q8IZU2 1322 aa10.51□□□□□ -0.73
LDHB-206ENST00000470985 KIAA1551Q9HCM1 1747 aa10.5□□□□□ -0.73
LDHB-206ENST00000470985 PER1O15534 1290 aaPredicted RBP10.5□□□□□ -0.73
LDHB-206ENST00000470985 NNTQ13423 1086 aa10.5□□□□□ -0.73
LDHB-206ENST00000470985 TLL2Q9Y6L7 1015 aa10.5□□□□□ -0.73
LDHB-206ENST00000470985 GCP02774 474 aa10.49□□□□□ -0.73
LDHB-206ENST00000470985 SCARF1Q14162 830 aa10.49□□□□□ -0.73
LDHB-206ENST00000470985 RTL5Q5HYW3 569 aaPredicted RBP10.49□□□□□ -0.73
LDHB-206ENST00000470985 RNF181Q9P0P0 153 aa10.49□□□□□ -0.73
LDHB-206ENST00000470985 CUL9Q8IWT3 2517 aa10.48□□□□□ -0.73
LDHB-206ENST00000470985 WFS1O76024 890 aa10.48□□□□□ -0.73
LDHB-206ENST00000470985 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
LDHB-206ENST00000470985 FOXJ1Q92949 421 aa10.48□□□□□ -0.73
LDHB-206ENST00000470985 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
LDHB-206ENST00000470985 PIK3C2GO75747 1445 aa10.48□□□□□ -0.73
LDHB-206ENST00000470985 COL18A1P39060 1754 aa10.47□□□□□ -0.73
LDHB-206ENST00000470985 ADH1CP00326 375 aa10.47□□□□□ -0.73
LDHB-206ENST00000470985 SOX10P56693 466 aa10.47□□□□□ -0.73
LDHB-206ENST00000470985 NR5A1Q13285 461 aa10.47□□□□□ -0.73
LDHB-206ENST00000470985 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.73
LDHB-206ENST00000470985 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
LDHB-206ENST00000470985 UPP2O95045 317 aa10.46□□□□□ -0.73
LDHB-206ENST00000470985 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.73
LDHB-206ENST00000470985 WDR4P57081 412 aaKnown RBP10.46□□□□□ -0.73
LDHB-206ENST00000470985 SH3D19Q5HYK7 790 aa10.46□□□□□ -0.73
LDHB-206ENST00000470985 AMIGO3Q86WK7 504 aa10.46□□□□□ -0.73
LDHB-206ENST00000470985 ABTB2Q8N961 1025 aa10.46□□□□□ -0.73
LDHB-206ENST00000470985 CARD10Q9BWT7 1032 aa10.46□□□□□ -0.73
LDHB-206ENST00000470985 VIRMAQ69YN4 1812 aaKnown RBP10.46□□□□□ -0.74
LDHB-206ENST00000470985 N4BP2Q86UW6 1770 aaPredicted RBP10.45□□□□□ -0.74
LDHB-206ENST00000470985 USP54Q70EL1 1684 aa10.45□□□□□ -0.74
LDHB-206ENST00000470985 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
LDHB-206ENST00000470985 FAM50AQ14320 339 aaKnown RBP10.45□□□□□ -0.74
LDHB-206ENST00000470985 HABP4Q5JVS0 413 aaKnown RBP10.45□□□□□ -0.74
LDHB-206ENST00000470985 CDK15Q96Q40 435 aa10.45□□□□□ -0.74
LDHB-206ENST00000470985 CCNL1Q9UK58 526 aaPredicted RBP10.45□□□□□ -0.74
LDHB-206ENST00000470985 LY75O60449 1722 aa10.44□□□□□ -0.74
LDHB-206ENST00000470985 EIF3AQ14152 1382 aaKnown RBP10.44□□□□□ -0.74
LDHB-206ENST00000470985 A0A0C4DFX4 3053 aa10.44□□□□□ -0.74
LDHB-206ENST00000470985 MAGEB6P1A0A0J9YX57 407 aa10.44□□□□□ -0.74
LDHB-206ENST00000470985 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
LDHB-206ENST00000470985 SZT2Q5T011 3432 aa10.43□□□□□ -0.74
LDHB-206ENST00000470985 SPATA31E1Q6ZUB1 1445 aa10.43□□□□□ -0.74
LDHB-206ENST00000470985 NSD2O96028 1365 aa10.43□□□□□ -0.74
LDHB-206ENST00000470985 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
LDHB-206ENST00000470985 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
LDHB-206ENST00000470985 POGKQ9P215 609 aa10.43□□□□□ -0.74
LDHB-206ENST00000470985 WASLO00401 505 aaPredicted RBP10.42□□□□□ -0.74
LDHB-206ENST00000470985 BMP1P13497 986 aa10.42□□□□□ -0.74
LDHB-206ENST00000470985 VASH1Q7L8A9 365 aaPredicted RBP10.42□□□□□ -0.74
LDHB-206ENST00000470985 TOGARAM1Q9Y4F4 1720 aa10.41□□□□□ -0.74
LDHB-206ENST00000470985 TERTO14746 1132 aaKnown RBP10.41□□□□□ -0.74
LDHB-206ENST00000470985 CSB-PGBD3P0DP91 1061 aa10.41□□□□□ -0.74
LDHB-206ENST00000470985 DPEP1P16444 411 aa10.41□□□□□ -0.74
LDHB-206ENST00000470985 KAT6BQ8WYB5 2073 aa10.41□□□□□ -0.74
LDHB-206ENST00000470985 POLR3AO14802 1390 aaPredicted RBP10.4□□□□□ -0.74
LDHB-206ENST00000470985 AP1G2O75843 785 aa10.4□□□□□ -0.74
LDHB-206ENST00000470985 ZIC2O95409 532 aaPredicted RBP10.4□□□□□ -0.74
LDHB-206ENST00000470985 FXR1P51114 621 aaKnown RBP eCLIP10.4□□□□□ -0.74
LDHB-206ENST00000470985 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
LDHB-206ENST00000470985 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
LDHB-206ENST00000470985 SYTL4Q96C24 671 aaPredicted RBP10.4□□□□□ -0.74
LDHB-206ENST00000470985 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 ACEP12821 1306 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 PASKQ96RG2 1323 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 SLIT3O75094 1523 aa10.39□□□□□ -0.75
LDHB-206ENST00000470985 ITSN1Q15811 1721 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms