RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 BBOX1O75936 387 aa12.13□□□□□ -0.47
USP30-205ENST00000470117 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
USP30-205ENST00000470117 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
USP30-205ENST00000470117 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
USP30-205ENST00000470117 MPNDQ8N594 471 aa12.13□□□□□ -0.47
USP30-205ENST00000470117 FAM89AQ96GI7 184 aa12.13□□□□□ -0.47
USP30-205ENST00000470117 ISCA1Q9BUE6 129 aa12.13□□□□□ -0.47
USP30-205ENST00000470117 LRRC37AA6NMS7 1700 aa12.13□□□□□ -0.47
USP30-205ENST00000470117 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 SCNN1DP51172 638 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 SP8Q8IXZ3 490 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 CNTROBQ8N137 903 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 TAF1P21675 1872 aa12.12□□□□□ -0.47
USP30-205ENST00000470117 DUOX1Q9NRD9 1551 aa12.11□□□□□ -0.47
USP30-205ENST00000470117 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
USP30-205ENST00000470117 EPS15P42566 896 aa12.11□□□□□ -0.47
USP30-205ENST00000470117 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
USP30-205ENST00000470117 RTFDC1Q9BY42 306 aaPredicted RBP12.11□□□□□ -0.47
USP30-205ENST00000470117 VPS33BQ9H267 617 aa12.11□□□□□ -0.47
USP30-205ENST00000470117 ZNRF3Q9ULT6 936 aa12.11□□□□□ -0.47
USP30-205ENST00000470117 IRS4O14654 1257 aaPredicted RBP12.1□□□□□ -0.47
USP30-205ENST00000470117 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
USP30-205ENST00000470117 COL13A1Q5TAT6 717 aaPredicted RBP12.1□□□□□ -0.47
USP30-205ENST00000470117 MYD88Q99836 296 aa12.1□□□□□ -0.47
USP30-205ENST00000470117 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
USP30-205ENST00000470117 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
USP30-205ENST00000470117 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
USP30-205ENST00000470117 CXCL9Q07325 125 aa12.09□□□□□ -0.47
USP30-205ENST00000470117 SF3B3Q15393 1217 aaKnown RBP12.09□□□□□ -0.47
USP30-205ENST00000470117 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
USP30-205ENST00000470117 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
USP30-205ENST00000470117 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
USP30-205ENST00000470117 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
USP30-205ENST00000470117 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
USP30-205ENST00000470117 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
USP30-205ENST00000470117 ABT1Q9ULW3 272 aaKnown RBP12.09□□□□□ -0.47
USP30-205ENST00000470117 COL4A1P02462 1669 aa12.09□□□□□ -0.47
USP30-205ENST00000470117 RAD17O75943 681 aa12.08□□□□□ -0.48
USP30-205ENST00000470117 HSP90B1P14625 803 aaKnown RBP12.08□□□□□ -0.48
USP30-205ENST00000470117 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
USP30-205ENST00000470117 TNIP1Q15025 636 aa12.08□□□□□ -0.48
USP30-205ENST00000470117 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
USP30-205ENST00000470117 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
USP30-205ENST00000470117 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
USP30-205ENST00000470117 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
USP30-205ENST00000470117 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
USP30-205ENST00000470117 ADARB2Q9NS39 739 aaKnown RBP12.08□□□□□ -0.48
USP30-205ENST00000470117 NSFL1CQ9UNZ2 370 aaKnown RBP12.08□□□□□ -0.48
USP30-205ENST00000470117 C6orf229H3BNL8 230 aa12.07□□□□□ -0.48
USP30-205ENST00000470117 VEGFBP49765 207 aa12.07□□□□□ -0.48
USP30-205ENST00000470117 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
USP30-205ENST00000470117 ZBTB38Q8NAP3 1195 aaPredicted RBP12.07□□□□□ -0.48
USP30-205ENST00000470117 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
USP30-205ENST00000470117 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
USP30-205ENST00000470117 CWC25Q9NXE8 425 aaPredicted RBP12.07□□□□□ -0.48
USP30-205ENST00000470117 CDHR2Q9BYE9 1310 aa12.07□□□□□ -0.48
USP30-205ENST00000470117 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 KCNA4P22459 653 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
USP30-205ENST00000470117 GPSM2P81274 684 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 WASHC4Q2M389 1173 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 CCDC191Q8NCU4 936 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 EYA3Q99504 573 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 DBNDD1Q9H9R9 158 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
USP30-205ENST00000470117 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 YDJCA8MPS7 323 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 TRAF5O00463 557 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
USP30-205ENST00000470117 CAPN15O75808 1086 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
USP30-205ENST00000470117 RPS8P62241 208 aaKnown RBP12.05□□□□□ -0.48
USP30-205ENST00000470117 FMR1Q06787 632 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP30-205ENST00000470117 GRM1Q13255 1194 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 DEFB115Q30KQ5 88 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
USP30-205ENST00000470117 CCDC85AQ96PX6 553 aaPredicted RBP12.05□□□□□ -0.48
USP30-205ENST00000470117 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
USP30-205ENST00000470117 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 TRPM7Q96QT4 1865 aa12.05□□□□□ -0.48
USP30-205ENST00000470117 FOXN1O15353 648 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 ANP32CO43423 234 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 ECE2O60344 883 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 PDE8AO60658 829 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 TWISTNBQ3B726 338 aaPredicted RBP12.04□□□□□ -0.48
USP30-205ENST00000470117 WWC1Q8IX03 1113 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 TRPM4Q8TD43 1214 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 GPR101Q96P66 508 aaPredicted RBP12.04□□□□□ -0.48
USP30-205ENST00000470117 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
USP30-205ENST00000470117 SHTN1A0MZ66 631 aa12.03□□□□□ -0.48
USP30-205ENST00000470117 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms