RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DCAF5Q96JK2 942 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 A0A1B0GUL7 405 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 PPP1R12AO14974 1030 aaPredicted RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 GNAI2P04899 355 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 SYNE4Q8N205 404 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 CCDC8Q9H0W5 538 aaPredicted RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 QTRT2Q9H974 415 aaKnown RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 MST1RQ04912 1400 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 DLC1Q96QB1 1528 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 KCNA4P22459 653 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 FOXD4L5Q5VV16 416 aaPredicted RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 FOXD4L4Q8WXT5 416 aaPredicted RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 OVOS2A0A0J9YW53 1432 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 OVOS2Q6IE36 1432 aa11.72□□□□□ -0.53
NUP50-214ENST00000469163 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
NUP50-214ENST00000469163 LRRC7Q96NW7 1537 aa11.71□□□□□ -0.53
NUP50-214ENST00000469163 ZNF445P59923 1031 aa11.71□□□□□ -0.53
NUP50-214ENST00000469163 FOXD4L6Q3SYB3 417 aaPredicted RBP11.71□□□□□ -0.53
NUP50-214ENST00000469163 FOXD4L3Q6VB84 417 aaPredicted RBP11.71□□□□□ -0.53
NUP50-214ENST00000469163 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
NUP50-214ENST00000469163 LCMT1Q9UIC8 334 aa11.71□□□□□ -0.53
NUP50-214ENST00000469163 CCDC189A1A4V9 331 aa11.71□□□□□ -0.54
NUP50-214ENST00000469163 HMMRO75330 724 aa11.71□□□□□ -0.54
NUP50-214ENST00000469163 TRIM37O94972 964 aa11.71□□□□□ -0.54
NUP50-214ENST00000469163 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.54
NUP50-214ENST00000469163 ARMCX6Q7L4S7 300 aa11.71□□□□□ -0.54
NUP50-214ENST00000469163 PIGBQ92521 554 aa11.71□□□□□ -0.54
NUP50-214ENST00000469163 ATP2B1P20020 1258 aa11.7□□□□□ -0.54
NUP50-214ENST00000469163 HELBQ8NG08 1087 aaPredicted RBP11.7□□□□□ -0.54
NUP50-214ENST00000469163 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
NUP50-214ENST00000469163 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
NUP50-214ENST00000469163 PPP1R42Q7Z4L9 355 aa11.7□□□□□ -0.54
NUP50-214ENST00000469163 PNMA6EA0A0J9YXQ4 647 aa11.7□□□□□ -0.54
NUP50-214ENST00000469163 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
NUP50-214ENST00000469163 SSFA2P28290 1259 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP50-214ENST00000469163 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 CWC15Q9P013 229 aaKnown RBP11.69□□□□□ -0.54
NUP50-214ENST00000469163 SYCE3A1L190 88 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 TEX35Q5T0J7 233 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
NUP50-214ENST00000469163 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 CASC1Q6TDU7 716 aa11.69□□□□□ -0.54
NUP50-214ENST00000469163 STARD3NLO95772 234 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUP50-214ENST00000469163 TNS3Q68CZ2 1445 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 ZNF446Q9NWS9 450 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 PCDH11XQ9BZA7 1347 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 PCDH11YQ9BZA8 1340 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 ANKARQ7Z5J8 1434 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 HCLS1P14317 486 aaPredicted RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 ZKSCAN8Q15776 578 aaPredicted RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 ALDH1L2Q3SY69 923 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 TTC19Q6DKK2 380 aaPredicted RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 BORCS6Q96GS4 357 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 POLR3GO15318 223 aaPredicted RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 REC8O95072 547 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
NUP50-214ENST00000469163 KNDC1Q76NI1 1749 aa11.68□□□□□ -0.54
NUP50-214ENST00000469163 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
NUP50-214ENST00000469163 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
NUP50-214ENST00000469163 AFF2P51816 1311 aa11.67□□□□□ -0.54
NUP50-214ENST00000469163 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
NUP50-214ENST00000469163 CTIFO43310 598 aaKnown RBP11.67□□□□□ -0.54
NUP50-214ENST00000469163 KDM4AO75164 1064 aa11.67□□□□□ -0.54
NUP50-214ENST00000469163 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
NUP50-214ENST00000469163 STRCQ7RTU9 1775 aa11.67□□□□□ -0.54
NUP50-214ENST00000469163 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 ZBTB1Q9Y2K1 713 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 XRN1Q8IZH2 1706 aaKnown RBP11.66□□□□□ -0.54
NUP50-214ENST00000469163 CCT4P50991 539 aaKnown RBP11.66□□□□□ -0.54
NUP50-214ENST00000469163 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 IRAK4Q9NWZ3 460 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
NUP50-214ENST00000469163 CDK12Q9NYV4 1490 aaPredicted RBP11.66□□□□□ -0.54
NUP50-214ENST00000469163 GNPATO15228 680 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 GNAI3P08754 354 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 ZSCAN26Q16670 478 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
NUP50-214ENST00000469163 ZBTB40Q9NUA8 1239 aa11.66□□□□□ -0.54
NUP50-214ENST00000469163 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUP50-214ENST00000469163 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
NUP50-214ENST00000469163 V9GYY5 206 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms