RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SUPT20HQ8NEM7 779 aa28.1■■■□□ 2.09
TTC28-204ENST00000468807 MYD88Q99836 296 aa28.1■■■□□ 2.09
TTC28-204ENST00000468807 CHMP4AQ9BY43 222 aa28.1■■■□□ 2.09
TTC28-204ENST00000468807 IRS4O14654 1257 aaPredicted RBP28.08■■■□□ 2.09
TTC28-204ENST00000468807 LMOD1P29536 600 aaPredicted RBP28.08■■■□□ 2.09
TTC28-204ENST00000468807 WWC1Q8IX03 1113 aa28.08■■■□□ 2.09
TTC28-204ENST00000468807 DDX58O95786 925 aaKnown RBP28.07■■■□□ 2.08
TTC28-204ENST00000468807 TRIM28Q13263 835 aaKnown RBP28.07■■■□□ 2.08
TTC28-204ENST00000468807 CCDC27Q2M243 656 aa28.07■■■□□ 2.08
TTC28-204ENST00000468807 PNMA8AQ86V59 439 aaPredicted RBP28.07■■■□□ 2.08
TTC28-204ENST00000468807 SALL2Q9Y467 1007 aaPredicted RBP28.07■■■□□ 2.08
TTC28-204ENST00000468807 JMYQ8N9B5 988 aa28.05■■■□□ 2.08
TTC28-204ENST00000468807 RTFDC1Q9BY42 306 aaPredicted RBP28.05■■■□□ 2.08
TTC28-204ENST00000468807 VPS33BQ9H267 617 aa28.05■■■□□ 2.08
TTC28-204ENST00000468807 SF3B3Q15393 1217 aaKnown RBP28.04■■■□□ 2.08
TTC28-204ENST00000468807 TMC4Q7Z404 712 aa28.04■■■□□ 2.08
TTC28-204ENST00000468807 ZBTB38Q8NAP3 1195 aaPredicted RBP28.04■■■□□ 2.08
TTC28-204ENST00000468807 CELF1Q92879 486 aaKnown RBP28.04■■■□□ 2.08
TTC28-204ENST00000468807 STK31Q9BXU1 1019 aa28.04■■■□□ 2.08
TTC28-204ENST00000468807 CREBZFQ9NS37 354 aa28.03■■■□□ 2.08
TTC28-204ENST00000468807 ZNRF3Q9ULT6 936 aa28.03■■■□□ 2.08
TTC28-204ENST00000468807 TWISTNBQ3B726 338 aaPredicted RBP28.02■■■□□ 2.08
TTC28-204ENST00000468807 MAP1SQ66K74 1059 aaPredicted RBP28.02■■■□□ 2.08
TTC28-204ENST00000468807 CWC25Q9NXE8 425 aaPredicted RBP28.02■■■□□ 2.08
TTC28-204ENST00000468807 LTBP1Q14766 1721 aa28.01■■■□□ 2.07
TTC28-204ENST00000468807 EPS15P42566 896 aa28.01■■■□□ 2.07
TTC28-204ENST00000468807 SCNN1DP51172 638 aa28.01■■■□□ 2.07
TTC28-204ENST00000468807 CCDC191Q8NCU4 936 aa28.01■■■□□ 2.07
TTC28-204ENST00000468807 JARID2Q92833 1246 aaPredicted RBP28.01■■■□□ 2.07
TTC28-204ENST00000468807 METTL22Q9BUU2 404 aaPredicted RBP28.01■■■□□ 2.07
TTC28-204ENST00000468807 MAP3K2Q9Y2U5 619 aa28.01■■■□□ 2.07
TTC28-204ENST00000468807 ADAMTSL1Q8N6G6 1762 aa28.01■■■□□ 2.07
TTC28-204ENST00000468807 PASKQ96RG2 1323 aa28■■■□□ 2.07
TTC28-204ENST00000468807 HSP90B1P14625 803 aaKnown RBP28■■■□□ 2.07
TTC28-204ENST00000468807 KIAA2012Q0VF49 1180 aa28■■■□□ 2.07
TTC28-204ENST00000468807 MKRN1Q9UHC7 482 aaKnown RBP28■■■□□ 2.07
TTC28-204ENST00000468807 NSFL1CQ9UNZ2 370 aaKnown RBP28■■■□□ 2.07
TTC28-204ENST00000468807 LRRC37AA6NMS7 1700 aa28■■■□□ 2.07
TTC28-204ENST00000468807 IL16Q14005 1332 aa27.99■■■□□ 2.07
TTC28-204ENST00000468807 CXCL9Q07325 125 aa27.99■■■□□ 2.07
TTC28-204ENST00000468807 PI4KAP2A4QPH2 592 aa27.98■■■□□ 2.07
TTC28-204ENST00000468807 CNTROBQ8N137 903 aa27.98■■■□□ 2.07
TTC28-204ENST00000468807 PI4KAP1Q8N8J0 262 aa27.98■■■□□ 2.07
TTC28-204ENST00000468807 CCDC85AQ96PX6 553 aaPredicted RBP27.98■■■□□ 2.07
TTC28-204ENST00000468807 COL4A1P02462 1669 aa27.97■■■□□ 2.07
TTC28-204ENST00000468807 RAD17O75943 681 aa27.97■■■□□ 2.07
TTC28-204ENST00000468807 ITGBL1O95965 494 aaPredicted RBP27.97■■■□□ 2.07
TTC28-204ENST00000468807 PCCAP05165 728 aaPredicted RBP27.97■■■□□ 2.07
TTC28-204ENST00000468807 KSR2Q6VAB6 950 aa27.97■■■□□ 2.07
TTC28-204ENST00000468807 DUOX1Q9NRD9 1551 aa27.97■■■□□ 2.07
TTC28-204ENST00000468807 C6orf229H3BNL8 230 aa27.96■■■□□ 2.07
TTC28-204ENST00000468807 RPS8P62241 208 aaKnown RBP27.96■■■□□ 2.07
TTC28-204ENST00000468807 CIAPIN1Q6FI81 312 aa27.96■■■□□ 2.07
TTC28-204ENST00000468807 FANCIQ9NVI1 1328 aa27.95■■■□□ 2.07
TTC28-204ENST00000468807 TMEM88BA6NKF7 163 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 PDE8AO60658 829 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 SLC4A2P04920 1241 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 GPSM2P81274 684 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 NEXNQ0ZGT2 675 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 WASHC4Q2M389 1173 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 CCDC152Q4G0S7 254 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 FAM9BQ8IZU0 186 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 SEC31BQ9NQW1 1179 aa27.95■■■□□ 2.06
TTC28-204ENST00000468807 RIMBP2O15034 1052 aa27.94■■■□□ 2.06
TTC28-204ENST00000468807 GMPSP49915 693 aaPredicted RBP27.94■■■□□ 2.06
TTC28-204ENST00000468807 TNIP1Q15025 636 aa27.94■■■□□ 2.06
TTC28-204ENST00000468807 NCBP3Q53F19 620 aaKnown RBP27.94■■■□□ 2.06
TTC28-204ENST00000468807 G2E3Q7L622 706 aa27.94■■■□□ 2.06
TTC28-204ENST00000468807 BCL2L13Q9BXK5 485 aa27.94■■■□□ 2.06
TTC28-204ENST00000468807 GPRC5DQ9NZD1 345 aa27.94■■■□□ 2.06
TTC28-204ENST00000468807 IFFO2Q5TF58 517 aa27.93■■■□□ 2.06
TTC28-204ENST00000468807 USP50Q70EL3 339 aaPredicted RBP27.93■■■□□ 2.06
TTC28-204ENST00000468807 ADARB2Q9NS39 739 aaKnown RBP27.92■■■□□ 2.06
TTC28-204ENST00000468807 POLLQ9UGP5 575 aa27.92■■■□□ 2.06
TTC28-204ENST00000468807 YDJCA8MPS7 323 aa27.91■■■□□ 2.06
TTC28-204ENST00000468807 IGKV5-2P06315 115 aa27.91■■■□□ 2.06
TTC28-204ENST00000468807 CWF19L2Q2TBE0 894 aaKnown RBP27.91■■■□□ 2.06
TTC28-204ENST00000468807 WDR63Q8IWG1 891 aa27.91■■■□□ 2.06
TTC28-204ENST00000468807 GPR101Q96P66 508 aaPredicted RBP27.91■■■□□ 2.06
TTC28-204ENST00000468807 EYA3Q99504 573 aa27.91■■■□□ 2.06
TTC28-204ENST00000468807 DBNDD1Q9H9R9 158 aa27.91■■■□□ 2.06
TTC28-204ENST00000468807 HSPA1AP0DMV8 641 aaKnown RBP27.9■■■□□ 2.06
TTC28-204ENST00000468807 HSPA1BP0DMV9 641 aaKnown RBP27.9■■■□□ 2.06
TTC28-204ENST00000468807 ANKIB1Q9P2G1 1089 aa27.9■■■□□ 2.06
TTC28-204ENST00000468807 TBC1D16Q8TBP0 767 aa27.89■■■□□ 2.06
TTC28-204ENST00000468807 CNTNAP1P78357 1384 aa27.88■■■□□ 2.05
TTC28-204ENST00000468807 FLIIQ13045 1269 aa27.88■■■□□ 2.05
TTC28-204ENST00000468807 FKBP5Q13451 457 aaPredicted RBP27.88■■■□□ 2.05
TTC28-204ENST00000468807 CDHR2Q9BYE9 1310 aa27.88■■■□□ 2.05
TTC28-204ENST00000468807 NEURL1BA8MQ27 555 aa27.87■■■□□ 2.05
TTC28-204ENST00000468807 UFL1O94874 794 aa27.87■■■□□ 2.05
TTC28-204ENST00000468807 EXOSC9Q06265 439 aaKnown RBP27.87■■■□□ 2.05
TTC28-204ENST00000468807 DOK7Q18PE1 504 aa27.87■■■□□ 2.05
TTC28-204ENST00000468807 ANKRD18AQ8IVF6 992 aa27.87■■■□□ 2.05
TTC28-204ENST00000468807 ABT1Q9ULW3 272 aaKnown RBP27.87■■■□□ 2.05
TTC28-204ENST00000468807 G3V3G9 751 aa27.86■■■□□ 2.05
TTC28-204ENST00000468807 CTSWP56202 376 aa27.86■■■□□ 2.05
TTC28-204ENST00000468807 DCAF8Q5TAQ9 597 aa27.86■■■□□ 2.05
TTC28-204ENST00000468807 ZC3H12CQ9C0D7 883 aaKnown RBP27.86■■■□□ 2.05
TTC28-204ENST00000468807 ZBTB12Q9Y330 459 aaPredicted RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms