RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 UBE3BQ7Z3V4 1068 aa29.52■■■□□ 2.32
SUMO3-205ENST00000466861 GRAPLQ8TC17 118 aaPredicted RBP29.52■■■□□ 2.32
SUMO3-205ENST00000466861 IPO8O15397 1037 aaKnown RBP29.51■■■□□ 2.31
SUMO3-205ENST00000466861 RTKN2Q8IZC4 609 aa29.51■■■□□ 2.31
SUMO3-205ENST00000466861 NOB1Q9ULX3 412 aaKnown RBP29.51■■■□□ 2.31
SUMO3-205ENST00000466861 GRM8O00222 908 aa29.5■■■□□ 2.31
SUMO3-205ENST00000466861 PPEF1O14829 653 aaPredicted RBP29.49■■■□□ 2.31
SUMO3-205ENST00000466861 CTSWP56202 376 aa29.49■■■□□ 2.31
SUMO3-205ENST00000466861 TMX4Q9H1E5 349 aaPredicted RBP29.49■■■□□ 2.31
SUMO3-205ENST00000466861 RTL9Q8NET4 1388 aa29.49■■■□□ 2.31
SUMO3-205ENST00000466861 NFKBIEO00221 500 aa29.48■■■□□ 2.31
SUMO3-205ENST00000466861 ATP6V0A2Q9Y487 856 aa29.48■■■□□ 2.31
SUMO3-205ENST00000466861 UTYO14607 1347 aa29.47■■■□□ 2.31
SUMO3-205ENST00000466861 CCT4P50991 539 aaKnown RBP29.47■■■□□ 2.31
SUMO3-205ENST00000466861 JARID2Q92833 1246 aaPredicted RBP29.47■■■□□ 2.31
SUMO3-205ENST00000466861 TAOK3Q9H2K8 898 aa29.47■■■□□ 2.31
SUMO3-205ENST00000466861 C9orf78Q9NZ63 289 aaPredicted RBP29.47■■■□□ 2.31
SUMO3-205ENST00000466861 SNED1Q8TER0 1413 aa29.46■■■□□ 2.31
SUMO3-205ENST00000466861 LMNB1P20700 586 aa29.46■■■□□ 2.31
SUMO3-205ENST00000466861 SP8Q8IXZ3 490 aa29.46■■■□□ 2.31
SUMO3-205ENST00000466861 TTLL11Q8NHH1 800 aa29.46■■■□□ 2.31
SUMO3-205ENST00000466861 ZNF219Q9P2Y4 722 aaPredicted RBP29.46■■■□□ 2.31
SUMO3-205ENST00000466861 ZC3H4Q9UPT8 1303 aaKnown RBP29.45■■■□□ 2.3
SUMO3-205ENST00000466861 CCDC88AQ3V6T2 1871 aa29.44■■■□□ 2.3
SUMO3-205ENST00000466861 DICER1Q9UPY3 1922 aaKnown RBP29.44■■■□□ 2.3
SUMO3-205ENST00000466861 CSF1RP07333 972 aa29.44■■■□□ 2.3
SUMO3-205ENST00000466861 FKBP4Q02790 459 aaKnown RBP eCLIP29.44■■■□□ 2.3
SUMO3-205ENST00000466861 PSMD1Q99460 953 aa29.44■■■□□ 2.3
SUMO3-205ENST00000466861 TAF1P21675 1872 aa29.44■■■□□ 2.3
SUMO3-205ENST00000466861 BCAR3O75815 825 aa29.43■■■□□ 2.3
SUMO3-205ENST00000466861 RPS8P62241 208 aaKnown RBP29.43■■■□□ 2.3
SUMO3-205ENST00000466861 C9orf131Q5VYM1 1079 aa29.43■■■□□ 2.3
SUMO3-205ENST00000466861 RASSF7Q02833 373 aa29.42■■■□□ 2.3
SUMO3-205ENST00000466861 LRRC37AA6NMS7 1700 aa29.42■■■□□ 2.3
SUMO3-205ENST00000466861 ATF7IPQ6VMQ6 1270 aa29.41■■■□□ 2.3
SUMO3-205ENST00000466861 CDC5LQ99459 802 aaKnown RBP29.41■■■□□ 2.3
SUMO3-205ENST00000466861 CELF1Q92879 486 aaKnown RBP29.4■■■□□ 2.3
SUMO3-205ENST00000466861 VPS33BQ9H267 617 aa29.4■■■□□ 2.3
SUMO3-205ENST00000466861 RNF181Q9P0P0 153 aa29.4■■■□□ 2.3
SUMO3-205ENST00000466861 ZKSCAN2Q63HK3 967 aa29.39■■■□□ 2.3
SUMO3-205ENST00000466861 FOXO4P98177 505 aa29.38■■■□□ 2.29
SUMO3-205ENST00000466861 INTS3Q68E01 1043 aaKnown RBP29.38■■■□□ 2.29
SUMO3-205ENST00000466861 SEC31BQ9NQW1 1179 aa29.38■■■□□ 2.29
SUMO3-205ENST00000466861 HDAC5Q9UQL6 1122 aa29.38■■■□□ 2.29
SUMO3-205ENST00000466861 TRIM27P14373 513 aa29.37■■■□□ 2.29
SUMO3-205ENST00000466861 OLFM4Q6UX06 510 aa29.37■■■□□ 2.29
SUMO3-205ENST00000466861 ANKRD18AQ8IVF6 992 aa29.37■■■□□ 2.29
SUMO3-205ENST00000466861 SUPT20HQ8NEM7 779 aa29.37■■■□□ 2.29
SUMO3-205ENST00000466861 RTFDC1Q9BY42 306 aaPredicted RBP29.37■■■□□ 2.29
SUMO3-205ENST00000466861 USP44Q9H0E7 712 aa29.37■■■□□ 2.29
SUMO3-205ENST00000466861 GREM2Q9H772 168 aa29.37■■■□□ 2.29
SUMO3-205ENST00000466861 NBPF7P0C2Y1 421 aaPredicted RBP29.36■■■□□ 2.29
SUMO3-205ENST00000466861 PRELPP51888 382 aa29.36■■■□□ 2.29
SUMO3-205ENST00000466861 FRAT1Q92837 279 aaPredicted RBP29.36■■■□□ 2.29
SUMO3-205ENST00000466861 MPNDQ8N594 471 aa29.35■■■□□ 2.29
SUMO3-205ENST00000466861 ITGA6P23229 1130 aa29.33■■■□□ 2.29
SUMO3-205ENST00000466861 DPP8Q6V1X1 898 aaPredicted RBP29.33■■■□□ 2.29
SUMO3-205ENST00000466861 CCDC85AQ96PX6 553 aaPredicted RBP29.33■■■□□ 2.29
SUMO3-205ENST00000466861 BSDC1Q9NW68 430 aaPredicted RBP29.33■■■□□ 2.29
SUMO3-205ENST00000466861 IARSP41252 1262 aaKnown RBP29.32■■■□□ 2.28
SUMO3-205ENST00000466861 RABL6Q3YEC7 729 aaPredicted RBP29.32■■■□□ 2.28
SUMO3-205ENST00000466861 LMBR1LQ6UX01 489 aa29.32■■■□□ 2.28
SUMO3-205ENST00000466861 SUCLG2Q96I99 432 aa29.32■■■□□ 2.28
SUMO3-205ENST00000466861 TIAM2Q8IVF5 1701 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 COL4A1P02462 1669 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 ANKRD18BA2A2Z9 1011 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 IGHMBP2P38935 993 aaKnown RBP29.31■■■□□ 2.28
SUMO3-205ENST00000466861 IFIT5Q13325 482 aaKnown RBP29.31■■■□□ 2.28
SUMO3-205ENST00000466861 FAM161AQ3B820 660 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 ZNF784Q8NCA9 323 aaPredicted RBP29.31■■■□□ 2.28
SUMO3-205ENST00000466861 KAZALD1Q96I82 304 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 PODXL2Q9NZ53 605 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 RCAN3Q9UKA8 241 aa29.31■■■□□ 2.28
SUMO3-205ENST00000466861 EPHA10Q5JZY3 1008 aa29.3■■■□□ 2.28
SUMO3-205ENST00000466861 ZNF277Q9NRM2 450 aaPredicted RBP29.3■■■□□ 2.28
SUMO3-205ENST00000466861 LTBP1Q14766 1721 aa29.28■■■□□ 2.28
SUMO3-205ENST00000466861 UBTFL1P0CB47 393 aaPredicted RBP29.28■■■□□ 2.28
SUMO3-205ENST00000466861 MS4A1P11836 297 aa29.28■■■□□ 2.28
SUMO3-205ENST00000466861 CCDC57Q2TAC2 916 aa29.28■■■□□ 2.28
SUMO3-205ENST00000466861 GNAI3P08754 354 aa29.27■■■□□ 2.28
SUMO3-205ENST00000466861 NSFL1CQ9UNZ2 370 aaKnown RBP29.27■■■□□ 2.28
SUMO3-205ENST00000466861 DZIP1LQ8IYY4 767 aaKnown RBP29.26■■■□□ 2.27
SUMO3-205ENST00000466861 JDP2Q8WYK2 163 aa29.26■■■□□ 2.27
SUMO3-205ENST00000466861 MPHOSPH8Q99549 860 aa29.26■■■□□ 2.27
SUMO3-205ENST00000466861 BICC1Q9H694 974 aaKnown RBP29.26■■■□□ 2.27
SUMO3-205ENST00000466861 CHMP3Q9Y3E7 222 aa29.26■■■□□ 2.27
SUMO3-205ENST00000466861 DUOX1Q9NRD9 1551 aa29.26■■■□□ 2.27
SUMO3-205ENST00000466861 XDHP47989 1333 aa29.25■■■□□ 2.27
SUMO3-205ENST00000466861 SPEF2Q9C093 1822 aa29.25■■■□□ 2.27
SUMO3-205ENST00000466861 FTSJ3Q8IY81 847 aaKnown RBP29.25■■■□□ 2.27
SUMO3-205ENST00000466861 KDM2BQ8NHM5 1336 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 GPSM2P81274 684 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 KIAA2012Q0VF49 1180 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 DPY19L2Q6NUT2 758 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 SLC51AQ86UW1 340 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 ANKRD44Q8N8A2 993 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 CLUAP1Q96AJ1 413 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 MINPP1Q9UNW1 487 aa29.24■■■□□ 2.27
SUMO3-205ENST00000466861 GLTPD2A6NH11 291 aa29.23■■■□□ 2.27
SUMO3-205ENST00000466861 LARGE2Q8N3Y3 721 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms