RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 CCDC191Q8NCU4 936 aa20.46■□□□□ 0.87
COL16A1-207ENST00000466829 SUPT20HQ8NEM7 779 aa20.46■□□□□ 0.87
COL16A1-207ENST00000466829 ANKRD36CQ5JPF3 1778 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 PI4KAP2A4QPH2 592 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 POTECB2RU33 542 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 NIM1KQ8IY84 436 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 PI4KAP1Q8N8J0 262 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 MYH16Q9H6N6 1097 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 GJA3Q9Y6H8 435 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
COL16A1-207ENST00000466829 FZD9O00144 591 aa20.44■□□□□ 0.86
COL16A1-207ENST00000466829 SF3B3Q15393 1217 aaKnown RBP20.44■□□□□ 0.86
COL16A1-207ENST00000466829 JARID2Q92833 1246 aaPredicted RBP20.44■□□□□ 0.86
COL16A1-207ENST00000466829 EXOSC9Q06265 439 aaKnown RBP20.43■□□□□ 0.86
COL16A1-207ENST00000466829 AOC3Q16853 763 aa20.43■□□□□ 0.86
COL16A1-207ENST00000466829 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
COL16A1-207ENST00000466829 PCCAP05165 728 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-207ENST00000466829 EAPPQ56P03 285 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-207ENST00000466829 L3MBTL3Q96JM7 780 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-207ENST00000466829 HACL1Q9UJ83 578 aa20.42■□□□□ 0.86
COL16A1-207ENST00000466829 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
COL16A1-207ENST00000466829 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
COL16A1-207ENST00000466829 G2E3Q7L622 706 aa20.41■□□□□ 0.86
COL16A1-207ENST00000466829 GPC2Q8N158 579 aa20.41■□□□□ 0.86
COL16A1-207ENST00000466829 CELF1Q92879 486 aaKnown RBP20.41■□□□□ 0.86
COL16A1-207ENST00000466829 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 VAMP4O75379 141 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 LMOD1P29536 600 aaPredicted RBP20.4■□□□□ 0.86
COL16A1-207ENST00000466829 HTRA3P83110 453 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 FLIIQ13045 1269 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 CCDC152Q4G0S7 254 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 CHADLQ6NUI6 762 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 CCDC85AQ96PX6 553 aaPredicted RBP20.4■□□□□ 0.86
COL16A1-207ENST00000466829 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 TAF1DQ9H5J8 278 aaPredicted RBP20.4■□□□□ 0.86
COL16A1-207ENST00000466829 NSFL1CQ9UNZ2 370 aaKnown RBP20.4■□□□□ 0.86
COL16A1-207ENST00000466829 CLEC11AQ9Y240 323 aa20.4■□□□□ 0.86
COL16A1-207ENST00000466829 WDR90Q96KV7 1748 aa20.39■□□□□ 0.86
COL16A1-207ENST00000466829 PDE8AO60658 829 aa20.39■□□□□ 0.85
COL16A1-207ENST00000466829 RPS8P62241 208 aaKnown RBP20.39■□□□□ 0.85
COL16A1-207ENST00000466829 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-207ENST00000466829 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-207ENST00000466829 EPHX2P34913 555 aa20.38■□□□□ 0.85
COL16A1-207ENST00000466829 CWF19L2Q2TBE0 894 aaKnown RBP20.38■□□□□ 0.85
COL16A1-207ENST00000466829 C6orf229H3BNL8 230 aa20.37■□□□□ 0.85
COL16A1-207ENST00000466829 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
COL16A1-207ENST00000466829 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
COL16A1-207ENST00000466829 POTEJP0CG39 1038 aa20.37■□□□□ 0.85
COL16A1-207ENST00000466829 LDHDQ86WU2 507 aa20.37■□□□□ 0.85
COL16A1-207ENST00000466829 ZNRF3Q9ULT6 936 aa20.37■□□□□ 0.85
COL16A1-207ENST00000466829 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
COL16A1-207ENST00000466829 SEC31BQ9NQW1 1179 aa20.36■□□□□ 0.85
COL16A1-207ENST00000466829 GTF3C3Q9Y5Q9 886 aa20.36■□□□□ 0.85
COL16A1-207ENST00000466829 NEURL1BA8MQ27 555 aa20.35■□□□□ 0.85
COL16A1-207ENST00000466829 SLFN5Q08AF3 891 aa20.35■□□□□ 0.85
COL16A1-207ENST00000466829 KIAA2012Q0VF49 1180 aa20.35■□□□□ 0.85
COL16A1-207ENST00000466829 WASHC4Q2M389 1173 aa20.35■□□□□ 0.85
COL16A1-207ENST00000466829 DNAAF4Q8WXU2 420 aa20.35■□□□□ 0.85
COL16A1-207ENST00000466829 ANKIB1Q9P2G1 1089 aa20.35■□□□□ 0.85
COL16A1-207ENST00000466829 E9PSI1 815 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 RIMBP2O15034 1052 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 GPSM2P81274 684 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 UBE3BQ7Z3V4 1068 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 ANKRD18AQ8IVF6 992 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 TRMT2AQ8IZ69 625 aaKnown RBP20.34■□□□□ 0.85
COL16A1-207ENST00000466829 CDCA7LQ96GN5 454 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 LAMB2P55268 1798 aa20.34■□□□□ 0.85
COL16A1-207ENST00000466829 CDHR2Q9BYE9 1310 aa20.33■□□□□ 0.85
COL16A1-207ENST00000466829 G3V3G9 751 aa20.33■□□□□ 0.85
COL16A1-207ENST00000466829 RAD17O75943 681 aa20.33■□□□□ 0.85
COL16A1-207ENST00000466829 CTSWP56202 376 aa20.33■□□□□ 0.85
COL16A1-207ENST00000466829 DCAF8Q5TAQ9 597 aa20.33■□□□□ 0.85
COL16A1-207ENST00000466829 EYA3Q99504 573 aa20.33■□□□□ 0.85
COL16A1-207ENST00000466829 COL4A5P29400 1685 aa20.32■□□□□ 0.84
COL16A1-207ENST00000466829 CXCL9Q07325 125 aa20.32■□□□□ 0.84
COL16A1-207ENST00000466829 TNIP1Q15025 636 aa20.32■□□□□ 0.84
COL16A1-207ENST00000466829 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
COL16A1-207ENST00000466829 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
COL16A1-207ENST00000466829 CDC5LQ99459 802 aaKnown RBP20.32■□□□□ 0.84
COL16A1-207ENST00000466829 BCL2L13Q9BXK5 485 aa20.32■□□□□ 0.84
COL16A1-207ENST00000466829 DDX60Q8IY21 1712 aaKnown RBP20.32■□□□□ 0.84
COL16A1-207ENST00000466829 EPS15P42566 896 aa20.31■□□□□ 0.84
COL16A1-207ENST00000466829 GCKRQ14397 625 aa20.31■□□□□ 0.84
COL16A1-207ENST00000466829 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
COL16A1-207ENST00000466829 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
COL16A1-207ENST00000466829 F6X3S4 739 aa20.3■□□□□ 0.84
COL16A1-207ENST00000466829 H7C1W4 665 aa20.3■□□□□ 0.84
COL16A1-207ENST00000466829 SCNN1DP51172 638 aa20.3■□□□□ 0.84
COL16A1-207ENST00000466829 KLRG1Q96E93 195 aa20.3■□□□□ 0.84
COL16A1-207ENST00000466829 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
COL16A1-207ENST00000466829 GGA1Q9UJY5 639 aa20.3■□□□□ 0.84
COL16A1-207ENST00000466829 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
COL16A1-207ENST00000466829 UFL1O94874 794 aa20.29■□□□□ 0.84
COL16A1-207ENST00000466829 GMPSP49915 693 aaPredicted RBP20.29■□□□□ 0.84
COL16A1-207ENST00000466829 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
COL16A1-207ENST00000466829 TBC1D16Q8TBP0 767 aa20.29■□□□□ 0.84
COL16A1-207ENST00000466829 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
COL16A1-207ENST00000466829 GREM2Q9H772 168 aa20.29■□□□□ 0.84
COL16A1-207ENST00000466829 DBNDD1Q9H9R9 158 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms