RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 KSR2Q6VAB6 950 aa21.39■■□□□ 1.01
SDHB-203ENST00000466613 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
SDHB-203ENST00000466613 SUPT20HQ8NEM7 779 aa21.39■■□□□ 1.01
SDHB-203ENST00000466613 RTFDC1Q9BY42 306 aaPredicted RBP21.39■■□□□ 1.01
SDHB-203ENST00000466613 CWC25Q9NXE8 425 aaPredicted RBP21.39■■□□□ 1.01
SDHB-203ENST00000466613 MAP3K2Q9Y2U5 619 aa21.39■■□□□ 1.01
SDHB-203ENST00000466613 COL4A1P02462 1669 aa21.38■■□□□ 1.01
SDHB-203ENST00000466613 EIF6P56537 245 aaKnown RBP21.38■■□□□ 1.01
SDHB-203ENST00000466613 GPC2Q8N158 579 aa21.38■■□□□ 1.01
SDHB-203ENST00000466613 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
SDHB-203ENST00000466613 MYH3P11055 1940 aa21.37■■□□□ 1.01
SDHB-203ENST00000466613 DUOX1Q9NRD9 1551 aa21.37■■□□□ 1.01
SDHB-203ENST00000466613 PI4KAP2A4QPH2 592 aa21.37■■□□□ 1.01
SDHB-203ENST00000466613 PPIP5K2O43314 1243 aa21.37■■□□□ 1.01
SDHB-203ENST00000466613 PCCAP05165 728 aaPredicted RBP21.37■■□□□ 1.01
SDHB-203ENST00000466613 HSP90B1P14625 803 aaKnown RBP21.37■■□□□ 1.01
SDHB-203ENST00000466613 DPP8Q6V1X1 898 aaPredicted RBP21.37■■□□□ 1.01
SDHB-203ENST00000466613 MPNDQ8N594 471 aa21.37■■□□□ 1.01
SDHB-203ENST00000466613 PI4KAP1Q8N8J0 262 aa21.37■■□□□ 1.01
SDHB-203ENST00000466613 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
SDHB-203ENST00000466613 AOC3Q16853 763 aa21.36■■□□□ 1.01
SDHB-203ENST00000466613 G2E3Q7L622 706 aa21.36■■□□□ 1.01
SDHB-203ENST00000466613 NIM1KQ8IY84 436 aa21.36■■□□□ 1.01
SDHB-203ENST00000466613 CELF1Q92879 486 aaKnown RBP21.36■■□□□ 1.01
SDHB-203ENST00000466613 TAF1DQ9H5J8 278 aaPredicted RBP21.36■■□□□ 1.01
SDHB-203ENST00000466613 ADAMTSL1Q8N6G6 1762 aa21.36■■□□□ 1.01
SDHB-203ENST00000466613 EXOSC9Q06265 439 aaKnown RBP21.35■■□□□ 1.01
SDHB-203ENST00000466613 CHADLQ6NUI6 762 aa21.35■■□□□ 1.01
SDHB-203ENST00000466613 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
SDHB-203ENST00000466613 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
SDHB-203ENST00000466613 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
SDHB-203ENST00000466613 VAMP4O75379 141 aa21.34■■□□□ 1.01
SDHB-203ENST00000466613 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
SDHB-203ENST00000466613 POTEIP0CG38 1075 aa21.34■■□□□ 1.01
SDHB-203ENST00000466613 POTEJP0CG39 1038 aa21.34■■□□□ 1.01
SDHB-203ENST00000466613 NEXNQ0ZGT2 675 aa21.34■■□□□ 1.01
SDHB-203ENST00000466613 CDHR2Q9BYE9 1310 aa21.33■■□□□ 1.01
SDHB-203ENST00000466613 HTRA3P83110 453 aa21.33■■□□□ 1.01
SDHB-203ENST00000466613 FLIIQ13045 1269 aa21.33■■□□□ 1.01
SDHB-203ENST00000466613 DNAJC5GQ8N7S2 189 aa21.33■■□□□ 1.01
SDHB-203ENST00000466613 MYH16Q9H6N6 1097 aa21.33■■□□□ 1.01
SDHB-203ENST00000466613 GJA3Q9Y6H8 435 aa21.33■■□□□ 1.01
SDHB-203ENST00000466613 PDE8AO60658 829 aa21.32■■□□□ 1
SDHB-203ENST00000466613 EPHX2P34913 555 aa21.32■■□□□ 1
SDHB-203ENST00000466613 KIAA2012Q0VF49 1180 aa21.32■■□□□ 1
SDHB-203ENST00000466613 LDHDQ86WU2 507 aa21.32■■□□□ 1
SDHB-203ENST00000466613 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
SDHB-203ENST00000466613 RPS8P62241 208 aaKnown RBP21.31■■□□□ 1
SDHB-203ENST00000466613 CWF19L2Q2TBE0 894 aaKnown RBP21.31■■□□□ 1
SDHB-203ENST00000466613 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
SDHB-203ENST00000466613 NEURL1BA8MQ27 555 aa21.3■■□□□ 1
SDHB-203ENST00000466613 FKBP5Q13451 457 aaPredicted RBP21.3■■□□□ 1
SDHB-203ENST00000466613 PNMA8AQ86V59 439 aaPredicted RBP21.3■■□□□ 1
SDHB-203ENST00000466613 SEC31BQ9NQW1 1179 aa21.3■■□□□ 1
SDHB-203ENST00000466613 ZNRF3Q9ULT6 936 aa21.3■■□□□ 1
SDHB-203ENST00000466613 ZNF521Q96K83 1311 aa21.29■■□□□ 1
SDHB-203ENST00000466613 LMOD1P29536 600 aaPredicted RBP21.29■■□□□ 1
SDHB-203ENST00000466613 EAPPQ56P03 285 aaPredicted RBP21.29■■□□□ 1
SDHB-203ENST00000466613 NSFL1CQ9UNZ2 370 aaKnown RBP21.29■■□□□ 1
SDHB-203ENST00000466613 SPEF2Q9C093 1822 aa21.28■■□□□ 1
SDHB-203ENST00000466613 SCNN1DP51172 638 aa21.28■■□□□ 1
SDHB-203ENST00000466613 KLRG1Q96E93 195 aa21.28■■□□□ 1
SDHB-203ENST00000466613 CTSWP56202 376 aa21.27■■□□□ 1
SDHB-203ENST00000466613 GPSM2P81274 684 aa21.27■■□□□ 1
SDHB-203ENST00000466613 CXCL9Q07325 125 aa21.27■■□□□ 1
SDHB-203ENST00000466613 DNAAF4Q8WXU2 420 aa21.27■■□□□ 1
SDHB-203ENST00000466613 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
SDHB-203ENST00000466613 POLLQ9UGP5 575 aa21.26■□□□□ 0.99
SDHB-203ENST00000466613 CLEC11AQ9Y240 323 aa21.26■□□□□ 0.99
SDHB-203ENST00000466613 H7C1W4 665 aa21.25■□□□□ 0.99
SDHB-203ENST00000466613 GCKRQ14397 625 aa21.25■□□□□ 0.99
SDHB-203ENST00000466613 WASHC4Q2M389 1173 aa21.25■□□□□ 0.99
SDHB-203ENST00000466613 PASKQ96RG2 1323 aa21.25■□□□□ 0.99
SDHB-203ENST00000466613 C6orf229H3BNL8 230 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 EPS15P42566 896 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 CIAPIN1Q6FI81 312 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 UBE3BQ7Z3V4 1068 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 LINS1Q8NG48 757 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 TBC1D16Q8TBP0 767 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 EYA3Q99504 573 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
SDHB-203ENST00000466613 RTL9Q8NET4 1388 aa21.23■□□□□ 0.99
SDHB-203ENST00000466613 YDJCA8MPS7 323 aa21.23■□□□□ 0.99
SDHB-203ENST00000466613 ANKRD18AQ8IVF6 992 aa21.23■□□□□ 0.99
SDHB-203ENST00000466613 CDC5LQ99459 802 aaKnown RBP21.23■□□□□ 0.99
SDHB-203ENST00000466613 RIMBP2O15034 1052 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 RAD17O75943 681 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 ITGBL1O95965 494 aaPredicted RBP21.22■□□□□ 0.99
SDHB-203ENST00000466613 TNIP1Q15025 636 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
SDHB-203ENST00000466613 PLA2G12BQ9BX93 195 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 GREM2Q9H772 168 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 CREBZFQ9NS37 354 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 GPRC5DQ9NZD1 345 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 ANKIB1Q9P2G1 1089 aa21.22■□□□□ 0.99
SDHB-203ENST00000466613 GMPSP49915 693 aaPredicted RBP21.21■□□□□ 0.99
SDHB-203ENST00000466613 CASP7P55210 303 aa21.21■□□□□ 0.99
SDHB-203ENST00000466613 MAP1SQ66K74 1059 aaPredicted RBP21.21■□□□□ 0.99
SDHB-203ENST00000466613 JMYQ8N9B5 988 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1811 ms