RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLDN4-204ENST00000466411 EVX2Q03828 476 aa9.07□□□□□ -0.96
CLDN4-204ENST00000466411 PKN2Q16513 984 aaKnown RBP9.07□□□□□ -0.96
CLDN4-204ENST00000466411 STYK1Q6J9G0 422 aa9.07□□□□□ -0.96
CLDN4-204ENST00000466411 PRR5LQ6MZQ0 368 aa9.07□□□□□ -0.96
CLDN4-204ENST00000466411 FBXO22Q8NEZ5 403 aa9.07□□□□□ -0.96
CLDN4-204ENST00000466411 TMEM106CQ9BVX2 250 aa9.07□□□□□ -0.96
CLDN4-204ENST00000466411 BCORQ6W2J9 1755 aa9.07□□□□□ -0.96
CLDN4-204ENST00000466411 TEFQ10587 303 aa9.06□□□□□ -0.96
CLDN4-204ENST00000466411 NFE2L2Q16236 605 aa9.06□□□□□ -0.96
CLDN4-204ENST00000466411 OLFM4Q6UX06 510 aa9.06□□□□□ -0.96
CLDN4-204ENST00000466411 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
CLDN4-204ENST00000466411 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
CLDN4-204ENST00000466411 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
CLDN4-204ENST00000466411 UBR2Q8IWV8 1755 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 CEMIPQ8WUJ3 1361 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 POTEFA5A3E0 1075 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 HAX1O00165 279 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 CYP19A1P11511 503 aaPredicted RBP9.05□□□□□ -0.96
CLDN4-204ENST00000466411 CABP4P57796 275 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 KIF23Q02241 960 aaPredicted RBP9.05□□□□□ -0.96
CLDN4-204ENST00000466411 MTHFSDQ2M296 383 aaKnown RBP9.05□□□□□ -0.96
CLDN4-204ENST00000466411 BICDL1Q6ZP65 573 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 SYNE4Q8N205 404 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 BABAM1Q9NWV8 329 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
CLDN4-204ENST00000466411 COL15A1P39059 1388 aa9.04□□□□□ -0.96
CLDN4-204ENST00000466411 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
CLDN4-204ENST00000466411 IARSP41252 1262 aaKnown RBP9.04□□□□□ -0.96
CLDN4-204ENST00000466411 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
CLDN4-204ENST00000466411 TBC1D9BQ66K14 1250 aa9.04□□□□□ -0.96
CLDN4-204ENST00000466411 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
CLDN4-204ENST00000466411 MASTLQ96GX5 879 aa9.04□□□□□ -0.96
CLDN4-204ENST00000466411 CHMP4AQ9BY43 222 aa9.04□□□□□ -0.96
CLDN4-204ENST00000466411 GLIS2Q9BZE0 524 aaPredicted RBP9.04□□□□□ -0.96
CLDN4-204ENST00000466411 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
CLDN4-204ENST00000466411 POLR2AP24928 1970 aaKnown RBP9.03□□□□□ -0.96
CLDN4-204ENST00000466411 PPP1R37O75864 691 aa9.03□□□□□ -0.96
CLDN4-204ENST00000466411 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
CLDN4-204ENST00000466411 SLC52A2Q9HAB3 445 aa9.03□□□□□ -0.96
CLDN4-204ENST00000466411 PAPPA2Q9BXP8 1791 aa9.03□□□□□ -0.96
CLDN4-204ENST00000466411 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
CLDN4-204ENST00000466411 KDM3BQ7LBC6 1761 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 KLRG2A4D1S0 409 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-204ENST00000466411 RNMTO43148 476 aaKnown RBP9.02□□□□□ -0.97
CLDN4-204ENST00000466411 TIE1P35590 1138 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 TMPOP42166 694 aaKnown RBP9.02□□□□□ -0.97
CLDN4-204ENST00000466411 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-204ENST00000466411 HUNKP57058 714 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 FBXO46Q6PJ61 603 aaPredicted RBP9.02□□□□□ -0.97
CLDN4-204ENST00000466411 DLK2Q6UY11 383 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 TTC5Q8N0Z6 440 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 PHACTR3Q96KR7 559 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 VCANP13611 3396 aa9.02□□□□□ -0.97
CLDN4-204ENST00000466411 TTLL13PA6NNM8 815 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 RIPK4P57078 832 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 RGMBQ6NW40 437 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 RTKN2Q8IZC4 609 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-204ENST00000466411 MS4A4AQ96JQ5 239 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 COL25A1Q9BXS0 654 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-204ENST00000466411 TEX13AQ9BXU3 409 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-204ENST00000466411 BMP2KQ9NSY1 1161 aaPredicted RBP9.01□□□□□ -0.97
CLDN4-204ENST00000466411 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 LAMB4A4D0S4 1761 aa9.01□□□□□ -0.97
CLDN4-204ENST00000466411 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
CLDN4-204ENST00000466411 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
CLDN4-204ENST00000466411 TAF7Q15545 349 aaPredicted RBP9□□□□□ -0.97
CLDN4-204ENST00000466411 PSMD1Q99460 953 aa9□□□□□ -0.97
CLDN4-204ENST00000466411 ADARB2Q9NS39 739 aaKnown RBP9□□□□□ -0.97
CLDN4-204ENST00000466411 GPRC5DQ9NZD1 345 aa9□□□□□ -0.97
CLDN4-204ENST00000466411 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
CLDN4-204ENST00000466411 FAM9BQ8IZU0 186 aa8.99□□□□□ -0.97
CLDN4-204ENST00000466411 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
CLDN4-204ENST00000466411 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
CLDN4-204ENST00000466411 PRO3102Q9H379 93 aa8.99□□□□□ -0.97
CLDN4-204ENST00000466411 IL16Q14005 1332 aa8.99□□□□□ -0.97
CLDN4-204ENST00000466411 BTBD11A6QL63 1104 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 APAF1O14727 1248 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 SLC10A3P09131 477 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 EIF6P56537 245 aaKnown RBP8.98□□□□□ -0.97
CLDN4-204ENST00000466411 GNAI1P63096 354 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 ZNF790Q6PG37 636 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 CCDC146Q8IYE0 955 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 JDP2Q8WYK2 163 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 FMNL2Q96PY5 1086 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 ZNF408Q9H9D4 720 aa8.98□□□□□ -0.97
CLDN4-204ENST00000466411 RBM27Q9P2N5 1060 aaKnown RBP8.98□□□□□ -0.97
CLDN4-204ENST00000466411 H0YGN5 161 aa8.97□□□□□ -0.97
CLDN4-204ENST00000466411 NPR1P16066 1061 aa8.97□□□□□ -0.97
CLDN4-204ENST00000466411 EN2P19622 333 aaPredicted RBP8.97□□□□□ -0.97
CLDN4-204ENST00000466411 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
CLDN4-204ENST00000466411 WDR63Q8IWG1 891 aa8.97□□□□□ -0.97
CLDN4-204ENST00000466411 IL17REQ8NFR9 667 aa8.97□□□□□ -0.97
CLDN4-204ENST00000466411 IFT57Q9NWB7 429 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms