RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 GRAPQ13588 217 aa32.96■■■□□ 2.87
SMC4-206ENST00000465903 GRAPLQ8TC17 118 aaPredicted RBP32.96■■■□□ 2.87
SMC4-206ENST00000465903 BBOX1O75936 387 aa32.95■■■□□ 2.87
SMC4-206ENST00000465903 HSP90B1P14625 803 aaKnown RBP32.95■■■□□ 2.87
SMC4-206ENST00000465903 CC2D2BQ6DHV5 1058 aa32.95■■■□□ 2.87
SMC4-206ENST00000465903 RTKN2Q8IZC4 609 aa32.95■■■□□ 2.87
SMC4-206ENST00000465903 FKBP4Q02790 459 aaKnown RBP eCLIP32.94■■■□□ 2.86
SMC4-206ENST00000465903 UBE3BQ7Z3V4 1068 aa32.94■■■□□ 2.86
SMC4-206ENST00000465903 SMC4Q9NTJ3 1288 aa32.94■■■□□ 2.86
SMC4-206ENST00000465903 ATP6V0A2Q9Y487 856 aa32.94■■■□□ 2.86
SMC4-206ENST00000465903 PTPRCP08575 1304 aa32.94■■■□□ 2.86
SMC4-206ENST00000465903 CELF1Q92879 486 aaKnown RBP32.93■■■□□ 2.86
SMC4-206ENST00000465903 TIAM2Q8IVF5 1701 aa32.93■■■□□ 2.86
SMC4-206ENST00000465903 RARSP54136 660 aaKnown RBP32.92■■■□□ 2.86
SMC4-206ENST00000465903 SLC4A10Q6U841 1118 aa32.92■■■□□ 2.86
SMC4-206ENST00000465903 BRPF1P55201 1214 aaPredicted RBP32.91■■■□□ 2.86
SMC4-206ENST00000465903 SP8Q8IXZ3 490 aa32.91■■■□□ 2.86
SMC4-206ENST00000465903 SEC31BQ9NQW1 1179 aa32.91■■■□□ 2.86
SMC4-206ENST00000465903 PLA2G12BQ9BX93 195 aa32.9■■■□□ 2.86
SMC4-206ENST00000465903 LRRC37AA6NMS7 1700 aa32.89■■■□□ 2.86
SMC4-206ENST00000465903 ALDH1L1O75891 902 aa32.89■■■□□ 2.86
SMC4-206ENST00000465903 TTLL11Q8NHH1 800 aa32.89■■■□□ 2.86
SMC4-206ENST00000465903 CCDC85AQ96PX6 553 aaPredicted RBP32.89■■■□□ 2.86
SMC4-206ENST00000465903 PSMD1Q99460 953 aa32.89■■■□□ 2.86
SMC4-206ENST00000465903 CTSWP56202 376 aa32.88■■■□□ 2.85
SMC4-206ENST00000465903 CCDC152Q4G0S7 254 aa32.88■■■□□ 2.85
SMC4-206ENST00000465903 ZNF526Q8TF50 670 aaPredicted RBP32.88■■■□□ 2.85
SMC4-206ENST00000465903 SRCIN1Q9C0H9 1055 aa32.88■■■□□ 2.85
SMC4-206ENST00000465903 GRIPAP1Q4V328 841 aa32.87■■■□□ 2.85
SMC4-206ENST00000465903 ZNF277Q9NRM2 450 aaPredicted RBP32.87■■■□□ 2.85
SMC4-206ENST00000465903 NOB1Q9ULX3 412 aaKnown RBP32.87■■■□□ 2.85
SMC4-206ENST00000465903 ZC3H4Q9UPT8 1303 aaKnown RBP32.86■■■□□ 2.85
SMC4-206ENST00000465903 RPS8P62241 208 aaKnown RBP32.86■■■□□ 2.85
SMC4-206ENST00000465903 TMC4Q7Z404 712 aa32.86■■■□□ 2.85
SMC4-206ENST00000465903 GRM8O00222 908 aa32.83■■■□□ 2.85
SMC4-206ENST00000465903 TMX4Q9H1E5 349 aaPredicted RBP32.83■■■□□ 2.85
SMC4-206ENST00000465903 GREM2Q9H772 168 aa32.83■■■□□ 2.85
SMC4-206ENST00000465903 GPBP1L1Q9HC44 474 aaPredicted RBP32.83■■■□□ 2.85
SMC4-206ENST00000465903 CSF1RP07333 972 aa32.82■■■□□ 2.84
SMC4-206ENST00000465903 IARSP41252 1262 aaKnown RBP32.82■■■□□ 2.84
SMC4-206ENST00000465903 SPEF2Q9C093 1822 aa32.81■■■□□ 2.84
SMC4-206ENST00000465903 MPNDQ8N594 471 aa32.81■■■□□ 2.84
SMC4-206ENST00000465903 RTFDC1Q9BY42 306 aaPredicted RBP32.81■■■□□ 2.84
SMC4-206ENST00000465903 RTL9Q8NET4 1388 aa32.81■■■□□ 2.84
SMC4-206ENST00000465903 FOXO4P98177 505 aa32.8■■■□□ 2.84
SMC4-206ENST00000465903 C9orf78Q9NZ63 289 aaPredicted RBP32.8■■■□□ 2.84
SMC4-206ENST00000465903 COL4A5P29400 1685 aa32.79■■■□□ 2.84
SMC4-206ENST00000465903 BCAR3O75815 825 aa32.79■■■□□ 2.84
SMC4-206ENST00000465903 UTYO14607 1347 aa32.78■■■□□ 2.84
SMC4-206ENST00000465903 LTBP1Q14766 1721 aa32.78■■■□□ 2.84
SMC4-206ENST00000465903 EPHA10Q5JZY3 1008 aa32.78■■■□□ 2.84
SMC4-206ENST00000465903 DUOX1Q9NRD9 1551 aa32.78■■■□□ 2.84
SMC4-206ENST00000465903 GLTPD2A6NH11 291 aa32.77■■■□□ 2.84
SMC4-206ENST00000465903 NBPF7P0C2Y1 421 aaPredicted RBP32.77■■■□□ 2.84
SMC4-206ENST00000465903 DPP8Q6V1X1 898 aaPredicted RBP32.77■■■□□ 2.84
SMC4-206ENST00000465903 ANKRD18AQ8IVF6 992 aa32.76■■■□□ 2.83
SMC4-206ENST00000465903 ARHGAP45Q92619 1136 aa32.76■■■□□ 2.83
SMC4-206ENST00000465903 API5Q9BZZ5 524 aaKnown RBP32.76■■■□□ 2.83
SMC4-206ENST00000465903 GPSM2P81274 684 aa32.75■■■□□ 2.83
SMC4-206ENST00000465903 KAZALD1Q96I82 304 aa32.75■■■□□ 2.83
SMC4-206ENST00000465903 CDC5LQ99459 802 aaKnown RBP32.75■■■□□ 2.83
SMC4-206ENST00000465903 NMRK2Q9NPI5 230 aa32.75■■■□□ 2.83
SMC4-206ENST00000465903 FAM161AQ3B820 660 aa32.74■■■□□ 2.83
SMC4-206ENST00000465903 SUPT20HQ8NEM7 779 aa32.74■■■□□ 2.83
SMC4-206ENST00000465903 SUCLG2Q96I99 432 aa32.74■■■□□ 2.83
SMC4-206ENST00000465903 USP44Q9H0E7 712 aa32.74■■■□□ 2.83
SMC4-206ENST00000465903 NSFL1CQ9UNZ2 370 aaKnown RBP32.74■■■□□ 2.83
SMC4-206ENST00000465903 KDM2BQ8NHM5 1336 aa32.74■■■□□ 2.83
SMC4-206ENST00000465903 KIF16BQ96L93 1317 aa32.74■■■□□ 2.83
SMC4-206ENST00000465903 KIF3CO14782 793 aa32.73■■■□□ 2.83
SMC4-206ENST00000465903 ITGA6P23229 1130 aa32.73■■■□□ 2.83
SMC4-206ENST00000465903 VPS33BQ9H267 617 aa32.73■■■□□ 2.83
SMC4-206ENST00000465903 FZD9O00144 591 aa32.72■■■□□ 2.83
SMC4-206ENST00000465903 AOC3Q16853 763 aa32.71■■■□□ 2.83
SMC4-206ENST00000465903 LMBR1LQ6UX01 489 aa32.71■■■□□ 2.83
SMC4-206ENST00000465903 LARGE2Q8N3Y3 721 aa32.71■■■□□ 2.83
SMC4-206ENST00000465903 PPIP5K2O43314 1243 aa32.7■■■□□ 2.83
SMC4-206ENST00000465903 CCT4P50991 539 aaKnown RBP32.7■■■□□ 2.83
SMC4-206ENST00000465903 DPY19L2Q6NUT2 758 aa32.7■■■□□ 2.83
SMC4-206ENST00000465903 BSDC1Q9NW68 430 aaPredicted RBP32.7■■■□□ 2.83
SMC4-206ENST00000465903 PODXL2Q9NZ53 605 aa32.7■■■□□ 2.83
SMC4-206ENST00000465903 POLLQ9UGP5 575 aa32.7■■■□□ 2.83
SMC4-206ENST00000465903 TNNQ9UQP3 1299 aa32.7■■■□□ 2.83
SMC4-206ENST00000465903 WDR90Q96KV7 1748 aa32.7■■■□□ 2.83
SMC4-206ENST00000465903 JDP2Q8WYK2 163 aa32.69■■■□□ 2.82
SMC4-206ENST00000465903 RRAGCQ9HB90 399 aa32.69■■■□□ 2.82
SMC4-206ENST00000465903 DDNO94850 711 aaPredicted RBP32.68■■■□□ 2.82
SMC4-206ENST00000465903 KIAA2012Q0VF49 1180 aa32.68■■■□□ 2.82
SMC4-206ENST00000465903 ZNF541Q9H0D2 1346 aa32.68■■■□□ 2.82
SMC4-206ENST00000465903 POTECB2RU33 542 aa32.67■■■□□ 2.82
SMC4-206ENST00000465903 TBC1D16Q8TBP0 767 aa32.67■■■□□ 2.82
SMC4-206ENST00000465903 MINPP1Q9UNW1 487 aa32.67■■■□□ 2.82
SMC4-206ENST00000465903 ANKRD18BA2A2Z9 1011 aa32.66■■■□□ 2.82
SMC4-206ENST00000465903 IPO8O15397 1037 aaKnown RBP32.66■■■□□ 2.82
SMC4-206ENST00000465903 FRAT1Q92837 279 aaPredicted RBP32.66■■■□□ 2.82
SMC4-206ENST00000465903 C6orf229H3BNL8 230 aa32.65■■■□□ 2.82
SMC4-206ENST00000465903 TRIM27P14373 513 aa32.65■■■□□ 2.82
SMC4-206ENST00000465903 IGHMBP2P38935 993 aaKnown RBP32.65■■■□□ 2.82
SMC4-206ENST00000465903 INTS3Q68E01 1043 aaKnown RBP32.65■■■□□ 2.82
SMC4-206ENST00000465903 ATF7IPQ6VMQ6 1270 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms