RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 CALD1Q05682 793 aaKnown RBP27.06■■□□□ 1.92
CSPG5-204ENST00000465441 LAMB2P55268 1798 aa27.05■■□□□ 1.92
CSPG5-204ENST00000465441 TMEM88BA6NKF7 163 aa27.05■■□□□ 1.92
CSPG5-204ENST00000465441 PHAXQ9H814 394 aaKnown RBP27.05■■□□□ 1.92
CSPG5-204ENST00000465441 TRIM28Q13263 835 aaKnown RBP27.04■■□□□ 1.92
CSPG5-204ENST00000465441 ZNRF3Q9ULT6 936 aa27.04■■□□□ 1.92
CSPG5-204ENST00000465441 ADAMTSL1Q8N6G6 1762 aa27.04■■□□□ 1.92
CSPG5-204ENST00000465441 CXCL9Q07325 125 aa27.03■■□□□ 1.92
CSPG5-204ENST00000465441 SF3B3Q15393 1217 aaKnown RBP27.03■■□□□ 1.92
CSPG5-204ENST00000465441 CCDC184Q52MB2 194 aa27.03■■□□□ 1.92
CSPG5-204ENST00000465441 RTL5Q5HYW3 569 aaPredicted RBP27.03■■□□□ 1.92
CSPG5-204ENST00000465441 RIC3Q7Z5B4 369 aa27.03■■□□□ 1.92
CSPG5-204ENST00000465441 C8orf58Q8NAV2 365 aa27.03■■□□□ 1.92
CSPG5-204ENST00000465441 LTBP1Q14766 1721 aa27.02■■□□□ 1.92
CSPG5-204ENST00000465441 CNTNAP1P78357 1384 aa27.01■■□□□ 1.91
CSPG5-204ENST00000465441 KIAA2012Q0VF49 1180 aa27.01■■□□□ 1.91
CSPG5-204ENST00000465441 TMC4Q7Z404 712 aa27.01■■□□□ 1.91
CSPG5-204ENST00000465441 CELF1Q92879 486 aaKnown RBP27.01■■□□□ 1.91
CSPG5-204ENST00000465441 TAF1P21675 1872 aa27.01■■□□□ 1.91
CSPG5-204ENST00000465441 USP50Q70EL3 339 aaPredicted RBP27■■□□□ 1.91
CSPG5-204ENST00000465441 PCNTO95613 3336 aa27■■□□□ 1.91
CSPG5-204ENST00000465441 IRS4O14654 1257 aaPredicted RBP26.99■■□□□ 1.91
CSPG5-204ENST00000465441 GOLGA2Q08379 1002 aa26.99■■□□□ 1.91
CSPG5-204ENST00000465441 CIAPIN1Q6FI81 312 aa26.98■■□□□ 1.91
CSPG5-204ENST00000465441 GPRC5DQ9NZD1 345 aa26.98■■□□□ 1.91
CSPG5-204ENST00000465441 VEGFBP49765 207 aa26.97■■□□□ 1.91
CSPG5-204ENST00000465441 MYD88Q99836 296 aa26.97■■□□□ 1.91
CSPG5-204ENST00000465441 DDX60Q8IY21 1712 aaKnown RBP26.96■■□□□ 1.91
CSPG5-204ENST00000465441 RAD17O75943 681 aa26.96■■□□□ 1.91
CSPG5-204ENST00000465441 FMR1Q06787 632 aaKnown RBP eCLIP26.96■■□□□ 1.91
CSPG5-204ENST00000465441 ZBTB38Q8NAP3 1195 aaPredicted RBP26.96■■□□□ 1.91
CSPG5-204ENST00000465441 ADARB2Q9NS39 739 aaKnown RBP26.96■■□□□ 1.91
CSPG5-204ENST00000465441 NSFL1CQ9UNZ2 370 aaKnown RBP26.96■■□□□ 1.91
CSPG5-204ENST00000465441 GMPSP49915 693 aaPredicted RBP26.95■■□□□ 1.9
CSPG5-204ENST00000465441 DEFB115Q30KQ5 88 aa26.95■■□□□ 1.9
CSPG5-204ENST00000465441 CCDC30Q5VVM6 783 aa26.95■■□□□ 1.9
CSPG5-204ENST00000465441 TSPYL6Q8N831 410 aa26.95■■□□□ 1.9
CSPG5-204ENST00000465441 YDJCA8MPS7 323 aa26.94■■□□□ 1.9
CSPG5-204ENST00000465441 TNIP1Q15025 636 aa26.94■■□□□ 1.9
CSPG5-204ENST00000465441 RPS8P62241 208 aaKnown RBP26.93■■□□□ 1.9
CSPG5-204ENST00000465441 WASHC4Q2M389 1173 aa26.93■■□□□ 1.9
CSPG5-204ENST00000465441 CCDC191Q8NCU4 936 aa26.93■■□□□ 1.9
CSPG5-204ENST00000465441 CHMP4AQ9BY43 222 aa26.93■■□□□ 1.9
CSPG5-204ENST00000465441 RASSF10A6NK89 507 aa26.92■■□□□ 1.9
CSPG5-204ENST00000465441 GPSM2P81274 684 aa26.92■■□□□ 1.9
CSPG5-204ENST00000465441 TNS4Q8IZW8 715 aa26.92■■□□□ 1.9
CSPG5-204ENST00000465441 JARID2Q92833 1246 aaPredicted RBP26.92■■□□□ 1.9
CSPG5-204ENST00000465441 METTL22Q9BUU2 404 aaPredicted RBP26.92■■□□□ 1.9
CSPG5-204ENST00000465441 BCL2L13Q9BXK5 485 aa26.92■■□□□ 1.9
CSPG5-204ENST00000465441 POLLQ9UGP5 575 aa26.92■■□□□ 1.9
CSPG5-204ENST00000465441 C6orf229H3BNL8 230 aa26.91■■□□□ 1.9
CSPG5-204ENST00000465441 RIMBP2O15034 1052 aa26.91■■□□□ 1.9
CSPG5-204ENST00000465441 TSR2Q969E8 191 aaKnown RBP26.91■■□□□ 1.9
CSPG5-204ENST00000465441 SEC31BQ9NQW1 1179 aa26.91■■□□□ 1.9
CSPG5-204ENST00000465441 DDX58O95786 925 aaKnown RBP26.9■■□□□ 1.9
CSPG5-204ENST00000465441 PCCAP05165 728 aaPredicted RBP26.9■■□□□ 1.9
CSPG5-204ENST00000465441 CCDC27Q2M243 656 aa26.9■■□□□ 1.9
CSPG5-204ENST00000465441 ABT1Q9ULW3 272 aaKnown RBP26.9■■□□□ 1.9
CSPG5-204ENST00000465441 TRAF5O00463 557 aa26.89■■□□□ 1.9
CSPG5-204ENST00000465441 HSP90B1P14625 803 aaKnown RBP26.89■■□□□ 1.9
CSPG5-204ENST00000465441 WWC1Q8IX03 1113 aa26.89■■□□□ 1.9
CSPG5-204ENST00000465441 CWC25Q9NXE8 425 aaPredicted RBP26.89■■□□□ 1.9
CSPG5-204ENST00000465441 CNOT7Q9UIV1 285 aaKnown RBP26.89■■□□□ 1.9
CSPG5-204ENST00000465441 COL4A1P02462 1669 aa26.89■■□□□ 1.89
CSPG5-204ENST00000465441 DUOX1Q9NRD9 1551 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 FOXN1O15353 648 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 PDE8AO60658 829 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 HIRAP54198 1017 aaPredicted RBP26.88■■□□□ 1.89
CSPG5-204ENST00000465441 CST9Q5W186 159 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 DBNDD1Q9H9R9 158 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 PGAP2Q9UHJ9 254 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 MAP3K2Q9Y2U5 619 aa26.88■■□□□ 1.89
CSPG5-204ENST00000465441 ZBTB12Q9Y330 459 aaPredicted RBP26.87■■□□□ 1.89
CSPG5-204ENST00000465441 CDHR2Q9BYE9 1310 aa26.87■■□□□ 1.89
CSPG5-204ENST00000465441 WDR33Q9C0J8 1336 aaKnown RBP26.87■■□□□ 1.89
CSPG5-204ENST00000465441 SHTN1A0MZ66 631 aa26.86■■□□□ 1.89
CSPG5-204ENST00000465441 LRRC37AA6NMS7 1700 aa26.86■■□□□ 1.89
CSPG5-204ENST00000465441 KSR2Q6VAB6 950 aa26.86■■□□□ 1.89
CSPG5-204ENST00000465441 TBC1D16Q8TBP0 767 aa26.86■■□□□ 1.89
CSPG5-204ENST00000465441 EYA3Q99504 573 aa26.86■■□□□ 1.89
CSPG5-204ENST00000465441 PI4KAP2A4QPH2 592 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 PSMD14O00487 310 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 DOK7Q18PE1 504 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 CCDC152Q4G0S7 254 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 PI4KAP1Q8N8J0 262 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 GPR101Q96P66 508 aaPredicted RBP26.85■■□□□ 1.89
CSPG5-204ENST00000465441 CCDC85AQ96PX6 553 aaPredicted RBP26.85■■□□□ 1.89
CSPG5-204ENST00000465441 KCNQ5Q9NR82 932 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 WBP1LQ9NX94 342 aa26.85■■□□□ 1.89
CSPG5-204ENST00000465441 H7C1D1 291 aa26.84■■□□□ 1.89
CSPG5-204ENST00000465441 TRPM4Q8TD43 1214 aa26.84■■□□□ 1.89
CSPG5-204ENST00000465441 PODXL2Q9NZ53 605 aa26.84■■□□□ 1.89
CSPG5-204ENST00000465441 IGKV5-2P06315 115 aa26.83■■□□□ 1.89
CSPG5-204ENST00000465441 ZEB1P37275 1124 aaPredicted RBP26.83■■□□□ 1.89
CSPG5-204ENST00000465441 TWISTNBQ3B726 338 aaPredicted RBP26.83■■□□□ 1.89
CSPG5-204ENST00000465441 ZC3H15Q8WU90 426 aaKnown RBP26.83■■□□□ 1.89
CSPG5-204ENST00000465441 DPF2Q92785 391 aa26.83■■□□□ 1.89
CSPG5-204ENST00000465441 STK31Q9BXU1 1019 aa26.83■■□□□ 1.89
CSPG5-204ENST00000465441 GLIS2Q9BZE0 524 aaPredicted RBP26.83■■□□□ 1.89
CSPG5-204ENST00000465441 ZC3H12CQ9C0D7 883 aaKnown RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms