RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 DPEP1P16444 411 aa16.74■□□□□ 0.27
ATPAF2-203ENST00000465337 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
ATPAF2-203ENST00000465337 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
ATPAF2-203ENST00000465337 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
ATPAF2-203ENST00000465337 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 FOXO4P98177 505 aa16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 MTX1Q13505 466 aa16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 CCDC57Q2TAC2 916 aa16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 SYNE4Q8N205 404 aa16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
ATPAF2-203ENST00000465337 ANKRD18BA2A2Z9 1011 aa16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 KCNA3P22001 575 aa16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 GRAPQ13588 217 aa16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 RPAP2Q8IXW5 612 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 MEIS3Q99687 375 aa16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
ATPAF2-203ENST00000465337 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
ATPAF2-203ENST00000465337 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
ATPAF2-203ENST00000465337 SUCLG2Q96I99 432 aa16.71■□□□□ 0.27
ATPAF2-203ENST00000465337 ZBTB40Q9NUA8 1239 aa16.71■□□□□ 0.27
ATPAF2-203ENST00000465337 CHRNA5P30532 468 aa16.7■□□□□ 0.26
ATPAF2-203ENST00000465337 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-203ENST00000465337 ANKRD18AQ8IVF6 992 aa16.7■□□□□ 0.26
ATPAF2-203ENST00000465337 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-203ENST00000465337 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
ATPAF2-203ENST00000465337 HMMRO75330 724 aa16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 ITGA6P23229 1130 aa16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
ATPAF2-203ENST00000465337 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 C20orf194Q5TEA3 1177 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
ATPAF2-203ENST00000465337 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 VPS33BQ9H267 617 aa16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 GREM2Q9H772 168 aa16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 ATP6V0A2Q9Y487 856 aa16.67■□□□□ 0.26
ATPAF2-203ENST00000465337 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
ATPAF2-203ENST00000465337 C7orf43Q8WVR3 580 aa16.66■□□□□ 0.26
ATPAF2-203ENST00000465337 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
ATPAF2-203ENST00000465337 PPEF1O14829 653 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-203ENST00000465337 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
ATPAF2-203ENST00000465337 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
ATPAF2-203ENST00000465337 LDHAL6AQ6ZMR3 332 aa16.65■□□□□ 0.26
ATPAF2-203ENST00000465337 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
ATPAF2-203ENST00000465337 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
ATPAF2-203ENST00000465337 CIAO1O76071 339 aa16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 GPR162Q16538 588 aa16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 SUPT20HQ8NEM7 779 aa16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
ATPAF2-203ENST00000465337 NEFLP07196 543 aa16.63■□□□□ 0.25
ATPAF2-203ENST00000465337 ERICH6BQ5W0A0 696 aa16.63■□□□□ 0.25
ATPAF2-203ENST00000465337 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
ATPAF2-203ENST00000465337 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
ATPAF2-203ENST00000465337 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
ATPAF2-203ENST00000465337 MROH5Q6ZUA9 1318 aa16.63■□□□□ 0.25
ATPAF2-203ENST00000465337 POLA2Q14181 598 aa16.62■□□□□ 0.25
ATPAF2-203ENST00000465337 CEP85Q6P2H3 762 aa16.62■□□□□ 0.25
ATPAF2-203ENST00000465337 PSMD1Q99460 953 aa16.62■□□□□ 0.25
ATPAF2-203ENST00000465337 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
ATPAF2-203ENST00000465337 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
ATPAF2-203ENST00000465337 EYA2O00167 538 aa16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 IL15P40933 162 aaPredicted RBP16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 MPNDQ8N594 471 aa16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 CCDC85AQ96PX6 553 aaPredicted RBP16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 CRBNQ96SW2 442 aa16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 LEMD3Q9Y2U8 911 aa16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
ATPAF2-203ENST00000465337 LAMB2P55268 1798 aa16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 C21orf2O43822 256 aa16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 EYA3Q99504 573 aa16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 RTFDC1Q9BY42 306 aaPredicted RBP16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 MINPP1Q9UNW1 487 aa16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 XDHP47989 1333 aa16.6■□□□□ 0.25
ATPAF2-203ENST00000465337 ANKRD31Q8N7Z5 1873 aa16.59■□□□□ 0.25
ATPAF2-203ENST00000465337 ATP2B4P23634 1241 aa16.59■□□□□ 0.25
ATPAF2-203ENST00000465337 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
ATPAF2-203ENST00000465337 ANKIB1Q9P2G1 1089 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms