RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 BCL2L13Q9BXK5 485 aa17.85■□□□□ 0.45
RPP40-203ENST00000464646 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
RPP40-203ENST00000464646 EPS15P42566 896 aa17.84■□□□□ 0.45
RPP40-203ENST00000464646 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
RPP40-203ENST00000464646 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
RPP40-203ENST00000464646 COL4A5P29400 1685 aa17.83■□□□□ 0.45
RPP40-203ENST00000464646 SNED1Q8TER0 1413 aa17.83■□□□□ 0.45
RPP40-203ENST00000464646 C6orf229H3BNL8 230 aa17.83■□□□□ 0.44
RPP40-203ENST00000464646 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
RPP40-203ENST00000464646 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
RPP40-203ENST00000464646 CCDC30Q5VVM6 783 aa17.83■□□□□ 0.44
RPP40-203ENST00000464646 ZNRF3Q9ULT6 936 aa17.83■□□□□ 0.44
RPP40-203ENST00000464646 ABT1Q9ULW3 272 aaKnown RBP17.83■□□□□ 0.44
RPP40-203ENST00000464646 NSFL1CQ9UNZ2 370 aaKnown RBP17.83■□□□□ 0.44
RPP40-203ENST00000464646 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
RPP40-203ENST00000464646 G3V3G9 751 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 RIMBP2O15034 1052 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 RAD17O75943 681 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 CCDC184Q52MB2 194 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 COL13A1Q5TAT6 717 aaPredicted RBP17.82■□□□□ 0.44
RPP40-203ENST00000464646 CIAPIN1Q6FI81 312 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 C8orf58Q8NAV2 365 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
RPP40-203ENST00000464646 VPS33BQ9H267 617 aa17.82■□□□□ 0.44
RPP40-203ENST00000464646 PASKQ96RG2 1323 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 ANP32CO43423 234 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 CAPN15O75808 1086 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 ITGBL1O95965 494 aaPredicted RBP17.81■□□□□ 0.44
RPP40-203ENST00000464646 SCNN1DP51172 638 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 GRM1Q13255 1194 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 TMC4Q7Z404 712 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 CELF1Q92879 486 aaKnown RBP17.81■□□□□ 0.44
RPP40-203ENST00000464646 TSR2Q969E8 191 aaKnown RBP17.81■□□□□ 0.44
RPP40-203ENST00000464646 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
RPP40-203ENST00000464646 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 CHMP4AQ9BY43 222 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
RPP40-203ENST00000464646 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
RPP40-203ENST00000464646 CXCL9Q07325 125 aa17.8■□□□□ 0.44
RPP40-203ENST00000464646 TNIP1Q15025 636 aa17.8■□□□□ 0.44
RPP40-203ENST00000464646 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
RPP40-203ENST00000464646 DDX60Q8IY21 1712 aaKnown RBP17.8■□□□□ 0.44
RPP40-203ENST00000464646 GMPSP49915 693 aaPredicted RBP17.79■□□□□ 0.44
RPP40-203ENST00000464646 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
RPP40-203ENST00000464646 WASHC4Q2M389 1173 aa17.79■□□□□ 0.44
RPP40-203ENST00000464646 USP50Q70EL3 339 aaPredicted RBP17.79■□□□□ 0.44
RPP40-203ENST00000464646 AIDAQ96BJ3 306 aa17.79■□□□□ 0.44
RPP40-203ENST00000464646 RTFDC1Q9BY42 306 aaPredicted RBP17.79■□□□□ 0.44
RPP40-203ENST00000464646 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
RPP40-203ENST00000464646 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
RPP40-203ENST00000464646 TSPYL6Q8N831 410 aa17.78■□□□□ 0.44
RPP40-203ENST00000464646 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
RPP40-203ENST00000464646 DBNDD1Q9H9R9 158 aa17.78■□□□□ 0.44
RPP40-203ENST00000464646 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
RPP40-203ENST00000464646 CWC25Q9NXE8 425 aaPredicted RBP17.78■□□□□ 0.44
RPP40-203ENST00000464646 GPRC5DQ9NZD1 345 aa17.78■□□□□ 0.44
RPP40-203ENST00000464646 CNTNAP1P78357 1384 aa17.78■□□□□ 0.44
RPP40-203ENST00000464646 VEGFBP49765 207 aa17.77■□□□□ 0.44
RPP40-203ENST00000464646 RPS8P62241 208 aaKnown RBP17.77■□□□□ 0.44
RPP40-203ENST00000464646 GPSM2P81274 684 aa17.77■□□□□ 0.44
RPP40-203ENST00000464646 EYA3Q99504 573 aa17.77■□□□□ 0.44
RPP40-203ENST00000464646 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
RPP40-203ENST00000464646 MAP3K2Q9Y2U5 619 aa17.77■□□□□ 0.44
RPP40-203ENST00000464646 LTBP1Q14766 1721 aa17.77■□□□□ 0.44
RPP40-203ENST00000464646 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
RPP40-203ENST00000464646 FMR1Q06787 632 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPP40-203ENST00000464646 NEXNQ0ZGT2 675 aa17.76■□□□□ 0.43
RPP40-203ENST00000464646 DOK7Q18PE1 504 aa17.76■□□□□ 0.43
RPP40-203ENST00000464646 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
RPP40-203ENST00000464646 CCDC191Q8NCU4 936 aa17.76■□□□□ 0.43
RPP40-203ENST00000464646 GPR101Q96P66 508 aaPredicted RBP17.76■□□□□ 0.43
RPP40-203ENST00000464646 METTL22Q9BUU2 404 aaPredicted RBP17.76■□□□□ 0.43
RPP40-203ENST00000464646 ZNF408Q9H9D4 720 aa17.76■□□□□ 0.43
RPP40-203ENST00000464646 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
RPP40-203ENST00000464646 H7C1D1 291 aa17.75■□□□□ 0.43
RPP40-203ENST00000464646 TRAF5O00463 557 aa17.75■□□□□ 0.43
RPP40-203ENST00000464646 PDE8AO60658 829 aa17.75■□□□□ 0.43
RPP40-203ENST00000464646 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
RPP40-203ENST00000464646 TWISTNBQ3B726 338 aaPredicted RBP17.75■□□□□ 0.43
RPP40-203ENST00000464646 ADAMTSL1Q8N6G6 1762 aa17.74■□□□□ 0.43
RPP40-203ENST00000464646 PCCAP05165 728 aaPredicted RBP17.74■□□□□ 0.43
RPP40-203ENST00000464646 RBM26Q5T8P6 1007 aaKnown RBP17.74■□□□□ 0.43
RPP40-203ENST00000464646 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
RPP40-203ENST00000464646 ZC3H12CQ9C0D7 883 aaKnown RBP17.74■□□□□ 0.43
RPP40-203ENST00000464646 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
RPP40-203ENST00000464646 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
RPP40-203ENST00000464646 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 YDJCA8MPS7 323 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 ECE2O60344 883 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 UFL1O94874 794 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 ANKRD18AQ8IVF6 992 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 POLLQ9UGP5 575 aa17.73■□□□□ 0.43
RPP40-203ENST00000464646 PSMD14O00487 310 aa17.72■□□□□ 0.43
RPP40-203ENST00000464646 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
RPP40-203ENST00000464646 MICALL2Q8IY33 904 aa17.72■□□□□ 0.43
RPP40-203ENST00000464646 GLIS2Q9BZE0 524 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms