RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 ATP6V0A2Q9Y487 856 aa28.37■■■□□ 2.13
UBA3-206ENST00000464605 BBOX1O75936 387 aa28.36■■■□□ 2.13
UBA3-206ENST00000464605 CWF19L2Q2TBE0 894 aaKnown RBP28.36■■■□□ 2.13
UBA3-206ENST00000464605 DDX46Q7L014 1031 aaKnown RBP28.36■■■□□ 2.13
UBA3-206ENST00000464605 LRRC37AA6NMS7 1700 aa28.35■■■□□ 2.13
UBA3-206ENST00000464605 NEURL1BA8MQ27 555 aa28.35■■■□□ 2.13
UBA3-206ENST00000464605 FKBP5Q13451 457 aaPredicted RBP28.35■■■□□ 2.13
UBA3-206ENST00000464605 GRAPQ13588 217 aa28.35■■■□□ 2.13
UBA3-206ENST00000464605 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
UBA3-206ENST00000464605 GRAPLQ8TC17 118 aaPredicted RBP28.35■■■□□ 2.13
UBA3-206ENST00000464605 VEGFAP15692 232 aaPredicted RBP28.34■■■□□ 2.13
UBA3-206ENST00000464605 GRIPAP1Q4V328 841 aa28.34■■■□□ 2.13
UBA3-206ENST00000464605 DNAAF4Q8WXU2 420 aa28.34■■■□□ 2.13
UBA3-206ENST00000464605 WDR90Q96KV7 1748 aa28.34■■■□□ 2.13
UBA3-206ENST00000464605 COL4A5P29400 1685 aa28.33■■■□□ 2.13
UBA3-206ENST00000464605 NEXNQ0ZGT2 675 aa28.33■■■□□ 2.13
UBA3-206ENST00000464605 SP8Q8IXZ3 490 aa28.33■■■□□ 2.13
UBA3-206ENST00000464605 DNAJC5GQ8N7S2 189 aa28.33■■■□□ 2.13
UBA3-206ENST00000464605 IARSP41252 1262 aaKnown RBP28.32■■■□□ 2.12
UBA3-206ENST00000464605 CELF1Q92879 486 aaKnown RBP28.32■■■□□ 2.12
UBA3-206ENST00000464605 CDHR2Q9BYE9 1310 aa28.32■■■□□ 2.12
UBA3-206ENST00000464605 POTECB2RU33 542 aa28.31■■■□□ 2.12
UBA3-206ENST00000464605 H7C1W4 665 aa28.3■■■□□ 2.12
UBA3-206ENST00000464605 PDE8AO60658 829 aa28.3■■■□□ 2.12
UBA3-206ENST00000464605 DPY19L2Q6NUT2 758 aa28.3■■■□□ 2.12
UBA3-206ENST00000464605 SMC1BQ8NDV3 1235 aa28.3■■■□□ 2.12
UBA3-206ENST00000464605 F6X3S4 739 aa28.29■■■□□ 2.12
UBA3-206ENST00000464605 GCKRQ14397 625 aa28.29■■■□□ 2.12
UBA3-206ENST00000464605 HSP90B1P14625 803 aaKnown RBP28.28■■■□□ 2.12
UBA3-206ENST00000464605 LINS1Q8NG48 757 aa28.28■■■□□ 2.12
UBA3-206ENST00000464605 RTFDC1Q9BY42 306 aaPredicted RBP28.28■■■□□ 2.12
UBA3-206ENST00000464605 FZD9O00144 591 aa28.27■■■□□ 2.12
UBA3-206ENST00000464605 CASP7P55210 303 aa28.27■■■□□ 2.12
UBA3-206ENST00000464605 TMC4Q7Z404 712 aa28.27■■■□□ 2.12
UBA3-206ENST00000464605 SEC31BQ9NQW1 1179 aa28.27■■■□□ 2.12
UBA3-206ENST00000464605 DUOX1Q9NRD9 1551 aa28.27■■■□□ 2.12
UBA3-206ENST00000464605 LTBP1Q14766 1721 aa28.26■■■□□ 2.12
UBA3-206ENST00000464605 DDNO94850 711 aaPredicted RBP28.26■■■□□ 2.11
UBA3-206ENST00000464605 BEND3Q5T5X7 828 aa28.26■■■□□ 2.11
UBA3-206ENST00000464605 MRPL50Q8N5N7 158 aaKnown RBP28.26■■■□□ 2.11
UBA3-206ENST00000464605 ZNF541Q9H0D2 1346 aa28.24■■■□□ 2.11
UBA3-206ENST00000464605 RPS8P62241 208 aaKnown RBP28.24■■■□□ 2.11
UBA3-206ENST00000464605 HTRA3P83110 453 aa28.24■■■□□ 2.11
UBA3-206ENST00000464605 UBE3BQ7Z3V4 1068 aa28.24■■■□□ 2.11
UBA3-206ENST00000464605 MPNDQ8N594 471 aa28.24■■■□□ 2.11
UBA3-206ENST00000464605 TMX4Q9H1E5 349 aaPredicted RBP28.24■■■□□ 2.11
UBA3-206ENST00000464605 SCN4AP35499 1836 aa28.23■■■□□ 2.11
UBA3-206ENST00000464605 CCDC152Q4G0S7 254 aa28.23■■■□□ 2.11
UBA3-206ENST00000464605 TTLL11Q8NHH1 800 aa28.23■■■□□ 2.11
UBA3-206ENST00000464605 SSH1Q8WYL5 1049 aa28.23■■■□□ 2.11
UBA3-206ENST00000464605 CCDC85AQ96PX6 553 aaPredicted RBP28.23■■■□□ 2.11
UBA3-206ENST00000464605 SPEF2Q9C093 1822 aa28.22■■■□□ 2.11
UBA3-206ENST00000464605 CTSWP56202 376 aa28.22■■■□□ 2.11
UBA3-206ENST00000464605 DPP8Q6V1X1 898 aaPredicted RBP28.22■■■□□ 2.11
UBA3-206ENST00000464605 LARGE2Q8N3Y3 721 aa28.21■■■□□ 2.11
UBA3-206ENST00000464605 PLA2G12BQ9BX93 195 aa28.21■■■□□ 2.11
UBA3-206ENST00000464605 VPS33BQ9H267 617 aa28.21■■■□□ 2.11
UBA3-206ENST00000464605 AOC3Q16853 763 aa28.2■■■□□ 2.1
UBA3-206ENST00000464605 JDP2Q8WYK2 163 aa28.2■■■□□ 2.1
UBA3-206ENST00000464605 PPIP5K2O43314 1243 aa28.19■■■□□ 2.1
UBA3-206ENST00000464605 SUPT20HQ8NEM7 779 aa28.19■■■□□ 2.1
UBA3-206ENST00000464605 L3MBTL3Q96JM7 780 aaPredicted RBP28.19■■■□□ 2.1
UBA3-206ENST00000464605 GPSM2P81274 684 aa28.18■■■□□ 2.1
UBA3-206ENST00000464605 KLRG1Q96E93 195 aa28.18■■■□□ 2.1
UBA3-206ENST00000464605 GREM2Q9H772 168 aa28.18■■■□□ 2.1
UBA3-206ENST00000464605 RTL9Q8NET4 1388 aa28.18■■■□□ 2.1
UBA3-206ENST00000464605 CSF1RP07333 972 aa28.16■■■□□ 2.1
UBA3-206ENST00000464605 KIAA2012Q0VF49 1180 aa28.16■■■□□ 2.1
UBA3-206ENST00000464605 ALDH1L2Q3SY69 923 aa28.16■■■□□ 2.1
UBA3-206ENST00000464605 POLLQ9UGP5 575 aa28.16■■■□□ 2.1
UBA3-206ENST00000464605 NSFL1CQ9UNZ2 370 aaKnown RBP28.16■■■□□ 2.1
UBA3-206ENST00000464605 BCL2L13Q9BXK5 485 aa28.15■■■□□ 2.1
UBA3-206ENST00000464605 CT47B1P0C2W7 299 aaPredicted RBP28.14■■■□□ 2.1
UBA3-206ENST00000464605 SLC4A10Q6U841 1118 aa28.14■■■□□ 2.1
UBA3-206ENST00000464605 NIM1KQ8IY84 436 aa28.14■■■□□ 2.1
UBA3-206ENST00000464605 GPC2Q8N158 579 aa28.14■■■□□ 2.1
UBA3-206ENST00000464605 PODXL2Q9NZ53 605 aa28.14■■■□□ 2.1
UBA3-206ENST00000464605 PTPRCP08575 1304 aa28.14■■■□□ 2.09
UBA3-206ENST00000464605 ALDH1L1O75891 902 aa28.13■■■□□ 2.09
UBA3-206ENST00000464605 FOXO4P98177 505 aa28.13■■■□□ 2.09
UBA3-206ENST00000464605 ANKRD18AQ8IVF6 992 aa28.13■■■□□ 2.09
UBA3-206ENST00000464605 JMYQ8N9B5 988 aa28.13■■■□□ 2.09
UBA3-206ENST00000464605 EIF6P56537 245 aaKnown RBP28.12■■■□□ 2.09
UBA3-206ENST00000464605 GRM8O00222 908 aa28.11■■■□□ 2.09
UBA3-206ENST00000464605 POTEIP0CG38 1075 aa28.11■■■□□ 2.09
UBA3-206ENST00000464605 POTEJP0CG39 1038 aa28.11■■■□□ 2.09
UBA3-206ENST00000464605 TBC1D16Q8TBP0 767 aa28.11■■■□□ 2.09
UBA3-206ENST00000464605 CDC5LQ99459 802 aaKnown RBP28.11■■■□□ 2.09
UBA3-206ENST00000464605 SRCIN1Q9C0H9 1055 aa28.11■■■□□ 2.09
UBA3-206ENST00000464605 ZNRF3Q9ULT6 936 aa28.11■■■□□ 2.09
UBA3-206ENST00000464605 IQCA1LA6NCM1 817 aa28.1■■■□□ 2.09
UBA3-206ENST00000464605 EPHA10Q5JZY3 1008 aa28.1■■■□□ 2.09
UBA3-206ENST00000464605 CHADLQ6NUI6 762 aa28.1■■■□□ 2.09
UBA3-206ENST00000464605 SCN9AQ15858 1988 aa28.1■■■□□ 2.09
UBA3-206ENST00000464605 CXCL9Q07325 125 aa28.09■■■□□ 2.09
UBA3-206ENST00000464605 WASHC4Q2M389 1173 aa28.09■■■□□ 2.09
UBA3-206ENST00000464605 FAM161AQ3B820 660 aa28.09■■■□□ 2.09
UBA3-206ENST00000464605 GPR101Q96P66 508 aaPredicted RBP28.09■■■□□ 2.09
UBA3-206ENST00000464605 TAF1DQ9H5J8 278 aaPredicted RBP28.09■■■□□ 2.09
UBA3-206ENST00000464605 BSDC1Q9NW68 430 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms