RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 RTFDC1Q9BY42 306 aaPredicted RBP18.85■□□□□ 0.61
ALMS1-202ENST00000464408 PHAXQ9H814 394 aaKnown RBP18.85■□□□□ 0.61
ALMS1-202ENST00000464408 HYPKQ9NX55 129 aa18.85■□□□□ 0.61
ALMS1-202ENST00000464408 CNTNAP1P78357 1384 aa18.84■□□□□ 0.61
ALMS1-202ENST00000464408 BBOX1O75936 387 aa18.84■□□□□ 0.61
ALMS1-202ENST00000464408 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
ALMS1-202ENST00000464408 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
ALMS1-202ENST00000464408 PNMA8AQ86V59 439 aaPredicted RBP18.84■□□□□ 0.61
ALMS1-202ENST00000464408 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
ALMS1-202ENST00000464408 MPNDQ8N594 471 aa18.84■□□□□ 0.61
ALMS1-202ENST00000464408 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.6
ALMS1-202ENST00000464408 CELF1Q92879 486 aaKnown RBP18.83■□□□□ 0.6
ALMS1-202ENST00000464408 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
ALMS1-202ENST00000464408 TMEM88BA6NKF7 163 aa18.82■□□□□ 0.6
ALMS1-202ENST00000464408 GNAI1P63096 354 aa18.82■□□□□ 0.6
ALMS1-202ENST00000464408 CXCL9Q07325 125 aa18.82■□□□□ 0.6
ALMS1-202ENST00000464408 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
ALMS1-202ENST00000464408 VEGFBP49765 207 aa18.8■□□□□ 0.6
ALMS1-202ENST00000464408 GMPSP49915 693 aaPredicted RBP18.8■□□□□ 0.6
ALMS1-202ENST00000464408 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
ALMS1-202ENST00000464408 SF3B3Q15393 1217 aaKnown RBP18.8■□□□□ 0.6
ALMS1-202ENST00000464408 RIC3Q7Z5B4 369 aa18.8■□□□□ 0.6
ALMS1-202ENST00000464408 TSPYL6Q8N831 410 aa18.8■□□□□ 0.6
ALMS1-202ENST00000464408 SUPT20HQ8NEM7 779 aa18.8■□□□□ 0.6
ALMS1-202ENST00000464408 TRPM7Q96QT4 1865 aa18.8■□□□□ 0.6
ALMS1-202ENST00000464408 YDJCA8MPS7 323 aa18.79■□□□□ 0.6
ALMS1-202ENST00000464408 IRS4O14654 1257 aaPredicted RBP18.79■□□□□ 0.6
ALMS1-202ENST00000464408 RAD17O75943 681 aa18.79■□□□□ 0.6
ALMS1-202ENST00000464408 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
ALMS1-202ENST00000464408 MYD88Q99836 296 aa18.79■□□□□ 0.6
ALMS1-202ENST00000464408 VPS33BQ9H267 617 aa18.79■□□□□ 0.6
ALMS1-202ENST00000464408 GPRC5DQ9NZD1 345 aa18.79■□□□□ 0.6
ALMS1-202ENST00000464408 SHTN1A0MZ66 631 aa18.78■□□□□ 0.6
ALMS1-202ENST00000464408 TRAF5O00463 557 aa18.78■□□□□ 0.6
ALMS1-202ENST00000464408 CALD1Q05682 793 aaKnown RBP18.78■□□□□ 0.6
ALMS1-202ENST00000464408 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
ALMS1-202ENST00000464408 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
ALMS1-202ENST00000464408 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
ALMS1-202ENST00000464408 GPSM2P81274 684 aa18.77■□□□□ 0.6
ALMS1-202ENST00000464408 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.6
ALMS1-202ENST00000464408 GPR101Q96P66 508 aaPredicted RBP18.77■□□□□ 0.6
ALMS1-202ENST00000464408 CIAPIN1Q6FI81 312 aa18.76■□□□□ 0.59
ALMS1-202ENST00000464408 TNS4Q8IZW8 715 aa18.76■□□□□ 0.59
ALMS1-202ENST00000464408 SEC31BQ9NQW1 1179 aa18.76■□□□□ 0.59
ALMS1-202ENST00000464408 POLLQ9UGP5 575 aa18.76■□□□□ 0.59
ALMS1-202ENST00000464408 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
ALMS1-202ENST00000464408 SCN9AQ15858 1988 aa18.75■□□□□ 0.59
ALMS1-202ENST00000464408 RASSF10A6NK89 507 aa18.75■□□□□ 0.59
ALMS1-202ENST00000464408 RIMBP2O15034 1052 aa18.75■□□□□ 0.59
ALMS1-202ENST00000464408 FOXN1O15353 648 aa18.75■□□□□ 0.59
ALMS1-202ENST00000464408 TMC4Q7Z404 712 aa18.75■□□□□ 0.59
ALMS1-202ENST00000464408 ZBTB38Q8NAP3 1195 aaPredicted RBP18.75■□□□□ 0.59
ALMS1-202ENST00000464408 ADARB2Q9NS39 739 aaKnown RBP18.75■□□□□ 0.59
ALMS1-202ENST00000464408 HIRAP54198 1017 aaPredicted RBP18.74■□□□□ 0.59
ALMS1-202ENST00000464408 TRPM4Q8TD43 1214 aa18.74■□□□□ 0.59
ALMS1-202ENST00000464408 CCDC85AQ96PX6 553 aaPredicted RBP18.74■□□□□ 0.59
ALMS1-202ENST00000464408 DBNDD1Q9H9R9 158 aa18.74■□□□□ 0.59
ALMS1-202ENST00000464408 ABT1Q9ULW3 272 aaKnown RBP18.74■□□□□ 0.59
ALMS1-202ENST00000464408 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
ALMS1-202ENST00000464408 CAPN15O75808 1086 aa18.73■□□□□ 0.59
ALMS1-202ENST00000464408 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
ALMS1-202ENST00000464408 CST9Q5W186 159 aa18.73■□□□□ 0.59
ALMS1-202ENST00000464408 METTL22Q9BUU2 404 aaPredicted RBP18.73■□□□□ 0.59
ALMS1-202ENST00000464408 BCL2L13Q9BXK5 485 aa18.73■□□□□ 0.59
ALMS1-202ENST00000464408 KCNQ5Q9NR82 932 aa18.73■□□□□ 0.59
ALMS1-202ENST00000464408 MAP3K2Q9Y2U5 619 aa18.73■□□□□ 0.59
ALMS1-202ENST00000464408 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
ALMS1-202ENST00000464408 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 PCCAP05165 728 aaPredicted RBP18.72■□□□□ 0.59
ALMS1-202ENST00000464408 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
ALMS1-202ENST00000464408 DOK7Q18PE1 504 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 DEFB115Q30KQ5 88 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 WWC1Q8IX03 1113 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 GLIS2Q9BZE0 524 aaPredicted RBP18.72■□□□□ 0.59
ALMS1-202ENST00000464408 CWC25Q9NXE8 425 aaPredicted RBP18.72■□□□□ 0.59
ALMS1-202ENST00000464408 MYH3P11055 1940 aa18.72■□□□□ 0.59
ALMS1-202ENST00000464408 RTL9Q8NET4 1388 aa18.71■□□□□ 0.59
ALMS1-202ENST00000464408 PSMD14O00487 310 aa18.71■□□□□ 0.59
ALMS1-202ENST00000464408 TNIP1Q15025 636 aa18.71■□□□□ 0.59
ALMS1-202ENST00000464408 G2E3Q7L622 706 aa18.71■□□□□ 0.59
ALMS1-202ENST00000464408 TBC1D16Q8TBP0 767 aa18.71■□□□□ 0.59
ALMS1-202ENST00000464408 POLR2AP24928 1970 aaKnown RBP18.71■□□□□ 0.59
ALMS1-202ENST00000464408 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
ALMS1-202ENST00000464408 THSD7BQ9C0I4 1608 aa18.71■□□□□ 0.58
ALMS1-202ENST00000464408 IGKV5-2P06315 115 aa18.7■□□□□ 0.58
ALMS1-202ENST00000464408 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
ALMS1-202ENST00000464408 CDHR2Q9BYE9 1310 aa18.7■□□□□ 0.58
ALMS1-202ENST00000464408 PI4KAP2A4QPH2 592 aa18.69■□□□□ 0.58
ALMS1-202ENST00000464408 ECE2O60344 883 aa18.69■□□□□ 0.58
ALMS1-202ENST00000464408 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
ALMS1-202ENST00000464408 DLK2Q6UY11 383 aa18.69■□□□□ 0.58
ALMS1-202ENST00000464408 MICALL2Q8IY33 904 aa18.69■□□□□ 0.58
ALMS1-202ENST00000464408 PI4KAP1Q8N8J0 262 aa18.69■□□□□ 0.58
ALMS1-202ENST00000464408 PDE8AO60658 829 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 DDX58O95786 925 aaKnown RBP18.68■□□□□ 0.58
ALMS1-202ENST00000464408 EGFRP00533 1210 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 CWF19L2Q2TBE0 894 aaKnown RBP18.68■□□□□ 0.58
ALMS1-202ENST00000464408 CYP4F22Q6NT55 531 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms