RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
RTN4R-204ENST00000463936 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
RTN4R-204ENST00000463936 RASSF10A6NK89 507 aa18.76■□□□□ 0.59
RTN4R-204ENST00000463936 HSP90AB3PQ58FF7 597 aa18.76■□□□□ 0.59
RTN4R-204ENST00000463936 ANKRD13DQ6ZTN6 518 aa18.76■□□□□ 0.59
RTN4R-204ENST00000463936 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
RTN4R-204ENST00000463936 CELF1Q92879 486 aaKnown RBP18.76■□□□□ 0.59
RTN4R-204ENST00000463936 GPRC5DQ9NZD1 345 aa18.76■□□□□ 0.59
RTN4R-204ENST00000463936 APAF1O14727 1248 aa18.75■□□□□ 0.59
RTN4R-204ENST00000463936 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
RTN4R-204ENST00000463936 GRAPQ13588 217 aa18.75■□□□□ 0.59
RTN4R-204ENST00000463936 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
RTN4R-204ENST00000463936 MPNDQ8N594 471 aa18.75■□□□□ 0.59
RTN4R-204ENST00000463936 GRAPLQ8TC17 118 aaPredicted RBP18.75■□□□□ 0.59
RTN4R-204ENST00000463936 PHAXQ9H814 394 aaKnown RBP18.75■□□□□ 0.59
RTN4R-204ENST00000463936 ZNRF3Q9ULT6 936 aa18.75■□□□□ 0.59
RTN4R-204ENST00000463936 LRRC37AA6NMS7 1700 aa18.74■□□□□ 0.59
RTN4R-204ENST00000463936 GMPSP49915 693 aaPredicted RBP18.74■□□□□ 0.59
RTN4R-204ENST00000463936 KIAA2012Q0VF49 1180 aa18.74■□□□□ 0.59
RTN4R-204ENST00000463936 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
RTN4R-204ENST00000463936 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
RTN4R-204ENST00000463936 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
RTN4R-204ENST00000463936 VPS33BQ9H267 617 aa18.74■□□□□ 0.59
RTN4R-204ENST00000463936 WBP1LQ9NX94 342 aa18.74■□□□□ 0.59
RTN4R-204ENST00000463936 RAD17O75943 681 aa18.73■□□□□ 0.59
RTN4R-204ENST00000463936 HOXB7P09629 217 aa18.73■□□□□ 0.59
RTN4R-204ENST00000463936 DEFB115Q30KQ5 88 aa18.73■□□□□ 0.59
RTN4R-204ENST00000463936 USP50Q70EL3 339 aaPredicted RBP18.73■□□□□ 0.59
RTN4R-204ENST00000463936 DDX46Q7L014 1031 aaKnown RBP18.73■□□□□ 0.59
RTN4R-204ENST00000463936 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
RTN4R-204ENST00000463936 ELL2O00472 640 aaPredicted RBP18.72■□□□□ 0.59
RTN4R-204ENST00000463936 LMOD1P29536 600 aaPredicted RBP18.72■□□□□ 0.59
RTN4R-204ENST00000463936 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
RTN4R-204ENST00000463936 DLK2Q6UY11 383 aa18.72■□□□□ 0.59
RTN4R-204ENST00000463936 C8orf58Q8NAV2 365 aa18.72■□□□□ 0.59
RTN4R-204ENST00000463936 KCNQ5Q9NR82 932 aa18.72■□□□□ 0.59
RTN4R-204ENST00000463936 JARID2Q92833 1246 aaPredicted RBP18.71■□□□□ 0.59
RTN4R-204ENST00000463936 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
RTN4R-204ENST00000463936 POLLQ9UGP5 575 aa18.71■□□□□ 0.59
RTN4R-204ENST00000463936 PGAP2Q9UHJ9 254 aa18.71■□□□□ 0.59
RTN4R-204ENST00000463936 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
RTN4R-204ENST00000463936 GPSM2P81274 684 aa18.7■□□□□ 0.58
RTN4R-204ENST00000463936 TRIM28Q13263 835 aaKnown RBP18.7■□□□□ 0.58
RTN4R-204ENST00000463936 SUPT20HQ8NEM7 779 aa18.7■□□□□ 0.58
RTN4R-204ENST00000463936 TRPM4Q8TD43 1214 aa18.7■□□□□ 0.58
RTN4R-204ENST00000463936 TRPM7Q96QT4 1865 aa18.7■□□□□ 0.58
RTN4R-204ENST00000463936 ADARB2Q9NS39 739 aaKnown RBP18.7■□□□□ 0.58
RTN4R-204ENST00000463936 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
RTN4R-204ENST00000463936 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
RTN4R-204ENST00000463936 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
RTN4R-204ENST00000463936 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
RTN4R-204ENST00000463936 SEC31BQ9NQW1 1179 aa18.69■□□□□ 0.58
RTN4R-204ENST00000463936 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
RTN4R-204ENST00000463936 EGFRP00533 1210 aa18.68■□□□□ 0.58
RTN4R-204ENST00000463936 ABT1Q9ULW3 272 aaKnown RBP18.68■□□□□ 0.58
RTN4R-204ENST00000463936 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
RTN4R-204ENST00000463936 RIMBP2O15034 1052 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 ANP32CO43423 234 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 LBX1P52954 281 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 DBNDD1Q9H9R9 158 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 CNOT7Q9UIV1 285 aaKnown RBP18.67■□□□□ 0.58
RTN4R-204ENST00000463936 NSFL1CQ9UNZ2 370 aaKnown RBP18.67■□□□□ 0.58
RTN4R-204ENST00000463936 THSD7BQ9C0I4 1608 aa18.67■□□□□ 0.58
RTN4R-204ENST00000463936 WTIPA6NIX2 430 aaPredicted RBP18.66■□□□□ 0.58
RTN4R-204ENST00000463936 HSPA8P11142 646 aaKnown RBP18.66■□□□□ 0.58
RTN4R-204ENST00000463936 CAPNS2Q96L46 248 aa18.66■□□□□ 0.58
RTN4R-204ENST00000463936 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
RTN4R-204ENST00000463936 PRDM10Q9NQV6 1147 aa18.66■□□□□ 0.58
RTN4R-204ENST00000463936 TLL2Q9Y6L7 1015 aa18.66■□□□□ 0.58
RTN4R-204ENST00000463936 SCN9AQ15858 1988 aa18.66■□□□□ 0.58
RTN4R-204ENST00000463936 RTL9Q8NET4 1388 aa18.66■□□□□ 0.58
RTN4R-204ENST00000463936 PSMD14O00487 310 aa18.65■□□□□ 0.58
RTN4R-204ENST00000463936 CTCFP49711 727 aaPredicted RBP18.65■□□□□ 0.58
RTN4R-204ENST00000463936 DOK7Q18PE1 504 aa18.65■□□□□ 0.58
RTN4R-204ENST00000463936 SAMD7Q7Z3H4 446 aa18.65■□□□□ 0.58
RTN4R-204ENST00000463936 MYD88Q99836 296 aa18.65■□□□□ 0.58
RTN4R-204ENST00000463936 AOC2O75106 756 aa18.64■□□□□ 0.57
RTN4R-204ENST00000463936 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
RTN4R-204ENST00000463936 WASHC4Q2M389 1173 aa18.64■□□□□ 0.57
RTN4R-204ENST00000463936 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
RTN4R-204ENST00000463936 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
RTN4R-204ENST00000463936 ZBTB38Q8NAP3 1195 aaPredicted RBP18.64■□□□□ 0.57
RTN4R-204ENST00000463936 TBC1D16Q8TBP0 767 aa18.64■□□□□ 0.57
RTN4R-204ENST00000463936 GNAI1P63096 354 aa18.63■□□□□ 0.57
RTN4R-204ENST00000463936 TNIP1Q15025 636 aa18.63■□□□□ 0.57
RTN4R-204ENST00000463936 SAPCD2Q86UD0 394 aa18.63■□□□□ 0.57
RTN4R-204ENST00000463936 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
RTN4R-204ENST00000463936 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
RTN4R-204ENST00000463936 POLR2AP24928 1970 aaKnown RBP18.62■□□□□ 0.57
RTN4R-204ENST00000463936 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
RTN4R-204ENST00000463936 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
RTN4R-204ENST00000463936 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
RTN4R-204ENST00000463936 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
RTN4R-204ENST00000463936 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
RTN4R-204ENST00000463936 IGKV5-2P06315 115 aa18.61■□□□□ 0.57
RTN4R-204ENST00000463936 GRM1Q13255 1194 aa18.61■□□□□ 0.57
RTN4R-204ENST00000463936 USP48Q86UV5 1035 aa18.61■□□□□ 0.57
RTN4R-204ENST00000463936 ZIC5Q96T25 663 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms