RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 LTBP1Q14766 1721 aa31.2■■■□□ 2.58
TTC3-212ENST00000463216 CNTNAP1P78357 1384 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 GNAI1P63096 354 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 CALD1Q05682 793 aaKnown RBP31.19■■■□□ 2.58
TTC3-212ENST00000463216 RIC3Q7Z5B4 369 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 ISCA1Q9BUE6 129 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 VPS33BQ9H267 617 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 IFT57Q9NWB7 429 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 ZNRF3Q9ULT6 936 aa31.19■■■□□ 2.58
TTC3-212ENST00000463216 ZNF853P0CG23 659 aa31.18■■■□□ 2.58
TTC3-212ENST00000463216 RTFDC1Q9BY42 306 aaPredicted RBP31.18■■■□□ 2.58
TTC3-212ENST00000463216 DDX60Q8IY21 1712 aaKnown RBP31.18■■■□□ 2.58
TTC3-212ENST00000463216 GOLGA2Q08379 1002 aa31.17■■■□□ 2.58
TTC3-212ENST00000463216 TNS4Q8IZW8 715 aa31.17■■■□□ 2.58
TTC3-212ENST00000463216 CXCL9Q07325 125 aa31.16■■■□□ 2.58
TTC3-212ENST00000463216 PHAXQ9H814 394 aaKnown RBP31.16■■■□□ 2.58
TTC3-212ENST00000463216 ABT1Q9ULW3 272 aaKnown RBP31.15■■■□□ 2.58
TTC3-212ENST00000463216 VEGFBP49765 207 aa31.14■■■□□ 2.58
TTC3-212ENST00000463216 KIAA2012Q0VF49 1180 aa31.14■■■□□ 2.58
TTC3-212ENST00000463216 USP50Q70EL3 339 aaPredicted RBP31.14■■■□□ 2.58
TTC3-212ENST00000463216 CAPN15O75808 1086 aa31.13■■■□□ 2.57
TTC3-212ENST00000463216 RAD17O75943 681 aa31.13■■■□□ 2.57
TTC3-212ENST00000463216 CELF1Q92879 486 aaKnown RBP31.13■■■□□ 2.57
TTC3-212ENST00000463216 GPRC5DQ9NZD1 345 aa31.13■■■□□ 2.57
TTC3-212ENST00000463216 IRS4O14654 1257 aaPredicted RBP31.12■■■□□ 2.57
TTC3-212ENST00000463216 CIAPIN1Q6FI81 312 aa31.12■■■□□ 2.57
TTC3-212ENST00000463216 TMC4Q7Z404 712 aa31.12■■■□□ 2.57
TTC3-212ENST00000463216 MYD88Q99836 296 aa31.12■■■□□ 2.57
TTC3-212ENST00000463216 BCL2L13Q9BXK5 485 aa31.12■■■□□ 2.57
TTC3-212ENST00000463216 GMPSP49915 693 aaPredicted RBP31.11■■■□□ 2.57
TTC3-212ENST00000463216 FMR1Q06787 632 aaKnown RBP eCLIP31.11■■■□□ 2.573e-10■■■□□ 15.6
TTC3-212ENST00000463216 SF3B3Q15393 1217 aaKnown RBP31.11■■■□□ 2.57
TTC3-212ENST00000463216 DEFB115Q30KQ5 88 aa31.11■■■□□ 2.57
TTC3-212ENST00000463216 C8orf58Q8NAV2 365 aa31.11■■■□□ 2.57
TTC3-212ENST00000463216 ADARB2Q9NS39 739 aaKnown RBP31.11■■■□□ 2.57
TTC3-212ENST00000463216 NSFL1CQ9UNZ2 370 aaKnown RBP31.11■■■□□ 2.57
TTC3-212ENST00000463216 TNIP1Q15025 636 aa31.09■■■□□ 2.57
TTC3-212ENST00000463216 TRIM28Q13263 835 aaKnown RBP31.08■■■□□ 2.57
TTC3-212ENST00000463216 C6orf229H3BNL8 230 aa31.07■■■□□ 2.56
TTC3-212ENST00000463216 TRAF5O00463 557 aa31.07■■■□□ 2.56
TTC3-212ENST00000463216 RIMBP2O15034 1052 aa31.07■■■□□ 2.56
TTC3-212ENST00000463216 WASHC4Q2M389 1173 aa31.07■■■□□ 2.56
TTC3-212ENST00000463216 CCDC184Q52MB2 194 aa31.07■■■□□ 2.56
TTC3-212ENST00000463216 PAXIP1Q6ZW49 1069 aaPredicted RBP31.07■■■□□ 2.56
TTC3-212ENST00000463216 AIDAQ96BJ3 306 aa31.07■■■□□ 2.56
TTC3-212ENST00000463216 CCDC30Q5VVM6 783 aa31.06■■■□□ 2.56
TTC3-212ENST00000463216 ZBTB38Q8NAP3 1195 aaPredicted RBP31.06■■■□□ 2.56
TTC3-212ENST00000463216 LRRC37AA6NMS7 1700 aa31.05■■■□□ 2.56
TTC3-212ENST00000463216 YDJCA8MPS7 323 aa31.05■■■□□ 2.56
TTC3-212ENST00000463216 FOXN1O15353 648 aa31.05■■■□□ 2.56
TTC3-212ENST00000463216 GPSM2P81274 684 aa31.05■■■□□ 2.56
TTC3-212ENST00000463216 JARID2Q92833 1246 aaPredicted RBP31.05■■■□□ 2.56
TTC3-212ENST00000463216 DUOX1Q9NRD9 1551 aa31.05■■■□□ 2.56
TTC3-212ENST00000463216 RASSF10A6NK89 507 aa31.04■■■□□ 2.56
TTC3-212ENST00000463216 DDX58O95786 925 aaKnown RBP31.04■■■□□ 2.56
TTC3-212ENST00000463216 GRM1Q13255 1194 aa31.04■■■□□ 2.56
TTC3-212ENST00000463216 TSR2Q969E8 191 aaKnown RBP31.04■■■□□ 2.56
TTC3-212ENST00000463216 DBNDD1Q9H9R9 158 aa31.04■■■□□ 2.56
TTC3-212ENST00000463216 RPS8P62241 208 aaKnown RBP31.03■■■□□ 2.56
TTC3-212ENST00000463216 TSPYL6Q8N831 410 aa31.03■■■□□ 2.56
TTC3-212ENST00000463216 COL4A1P02462 1669 aa31.03■■■□□ 2.56
TTC3-212ENST00000463216 HSP90B1P14625 803 aaKnown RBP31.02■■■□□ 2.56
TTC3-212ENST00000463216 CCDC85AQ96PX6 553 aaPredicted RBP31.02■■■□□ 2.56
TTC3-212ENST00000463216 SEC31BQ9NQW1 1179 aa31.02■■■□□ 2.56
TTC3-212ENST00000463216 POLLQ9UGP5 575 aa31.02■■■□□ 2.56
TTC3-212ENST00000463216 TRPM7Q96QT4 1865 aa31.01■■■□□ 2.56
TTC3-212ENST00000463216 WDR33Q9C0J8 1336 aaKnown RBP31.01■■■□□ 2.56
TTC3-212ENST00000463216 CCDC191Q8NCU4 936 aa31.01■■■□□ 2.55
TTC3-212ENST00000463216 GPR101Q96P66 508 aaPredicted RBP31.01■■■□□ 2.55
TTC3-212ENST00000463216 CHMP4AQ9BY43 222 aa31.01■■■□□ 2.55
TTC3-212ENST00000463216 CWC25Q9NXE8 425 aaPredicted RBP31.01■■■□□ 2.55
TTC3-212ENST00000463216 CNOT7Q9UIV1 285 aaKnown RBP31.01■■■□□ 2.55
TTC3-212ENST00000463216 ZBTB12Q9Y330 459 aaPredicted RBP31.01■■■□□ 2.55
TTC3-212ENST00000463216 DOK7Q18PE1 504 aa31■■■□□ 2.55
TTC3-212ENST00000463216 EYA3Q99504 573 aa31■■■□□ 2.55
TTC3-212ENST00000463216 SHTN1A0MZ66 631 aa30.99■■■□□ 2.55
TTC3-212ENST00000463216 H7C1D1 291 aa30.99■■■□□ 2.55
TTC3-212ENST00000463216 METTL22Q9BUU2 404 aaPredicted RBP30.99■■■□□ 2.55
TTC3-212ENST00000463216 MAP3K2Q9Y2U5 619 aa30.99■■■□□ 2.55
TTC3-212ENST00000463216 CDHR2Q9BYE9 1310 aa30.98■■■□□ 2.55
TTC3-212ENST00000463216 PSMD14O00487 310 aa30.98■■■□□ 2.55
TTC3-212ENST00000463216 PCCAP05165 728 aaPredicted RBP30.98■■■□□ 2.55
TTC3-212ENST00000463216 CCDC152Q4G0S7 254 aa30.98■■■□□ 2.55
TTC3-212ENST00000463216 CST9Q5W186 159 aa30.98■■■□□ 2.55
TTC3-212ENST00000463216 MICALL2Q8IY33 904 aa30.98■■■□□ 2.55
TTC3-212ENST00000463216 TRPM4Q8TD43 1214 aa30.98■■■□□ 2.55
TTC3-212ENST00000463216 GLIS2Q9BZE0 524 aaPredicted RBP30.98■■■□□ 2.55
TTC3-212ENST00000463216 PDE8AO60658 829 aa30.97■■■□□ 2.55
TTC3-212ENST00000463216 CTCFP49711 727 aaPredicted RBP30.97■■■□□ 2.55
TTC3-212ENST00000463216 TBC1D16Q8TBP0 767 aa30.97■■■□□ 2.55
TTC3-212ENST00000463216 STK31Q9BXU1 1019 aa30.97■■■□□ 2.55
TTC3-212ENST00000463216 ZNF408Q9H9D4 720 aa30.97■■■□□ 2.55
TTC3-212ENST00000463216 ANKIB1Q9P2G1 1089 aa30.97■■■□□ 2.55
TTC3-212ENST00000463216 G3V3G9 751 aa30.96■■■□□ 2.55
TTC3-212ENST00000463216 ECE2O60344 883 aa30.96■■■□□ 2.55
TTC3-212ENST00000463216 CELF2O95319 508 aaKnown RBP30.96■■■□□ 2.55
TTC3-212ENST00000463216 HIRAP54198 1017 aaPredicted RBP30.96■■■□□ 2.55
TTC3-212ENST00000463216 DCAF8Q5TAQ9 597 aa30.96■■■□□ 2.55
TTC3-212ENST00000463216 WBP1LQ9NX94 342 aa30.96■■■□□ 2.55
TTC3-212ENST00000463216 CYP4F22Q6NT55 531 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms