RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 DPP8Q6V1X1 898 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-210ENST00000463041 KSR2Q6VAB6 950 aa9.37□□□□□ -0.91
PTPRF-210ENST00000463041 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-210ENST00000463041 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
PTPRF-210ENST00000463041 NIM1KQ8IY84 436 aa9.37□□□□□ -0.91
PTPRF-210ENST00000463041 TSR2Q969E8 191 aaKnown RBP9.37□□□□□ -0.91
PTPRF-210ENST00000463041 KLRG1Q96E93 195 aa9.37□□□□□ -0.91
PTPRF-210ENST00000463041 MYD88Q99836 296 aa9.37□□□□□ -0.91
PTPRF-210ENST00000463041 METTL22Q9BUU2 404 aaPredicted RBP9.37□□□□□ -0.91
PTPRF-210ENST00000463041 STK31Q9BXU1 1019 aa9.37□□□□□ -0.91
PTPRF-210ENST00000463041 PPIP5K2O43314 1243 aa9.36□□□□□ -0.91
PTPRF-210ENST00000463041 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
PTPRF-210ENST00000463041 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
PTPRF-210ENST00000463041 EPHX2P34913 555 aa9.36□□□□□ -0.91
PTPRF-210ENST00000463041 RPS8P62241 208 aaKnown RBP9.36□□□□□ -0.91
PTPRF-210ENST00000463041 CWC25Q9NXE8 425 aaPredicted RBP9.36□□□□□ -0.91
PTPRF-210ENST00000463041 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
PTPRF-210ENST00000463041 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
PTPRF-210ENST00000463041 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 PDE8AO60658 829 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-210ENST00000463041 HTRA3P83110 453 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 NEXNQ0ZGT2 675 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 AOC3Q16853 763 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 RTL5Q5HYW3 569 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-210ENST00000463041 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 JMYQ8N9B5 988 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
PTPRF-210ENST00000463041 SALL2Q9Y467 1007 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-210ENST00000463041 DDX60Q8IY21 1712 aaKnown RBP9.34□□□□□ -0.91
PTPRF-210ENST00000463041 VAMP4O75379 141 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
PTPRF-210ENST00000463041 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 CXCL9Q07325 125 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 KIAA2012Q0VF49 1180 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 TNIP1Q15025 636 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
PTPRF-210ENST00000463041 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 CELF1Q92879 486 aaKnown RBP9.34□□□□□ -0.91
PTPRF-210ENST00000463041 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
PTPRF-210ENST00000463041 NSFL1CQ9UNZ2 370 aaKnown RBP9.34□□□□□ -0.91
PTPRF-210ENST00000463041 IGKV5-2P06315 115 aa9.33□□□□□ -0.92
PTPRF-210ENST00000463041 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
PTPRF-210ENST00000463041 CIAPIN1Q6FI81 312 aa9.33□□□□□ -0.92
PTPRF-210ENST00000463041 USP50Q70EL3 339 aaPredicted RBP9.33□□□□□ -0.92
PTPRF-210ENST00000463041 SLC51AQ86UW1 340 aa9.33□□□□□ -0.92
PTPRF-210ENST00000463041 CNTROBQ8N137 903 aa9.33□□□□□ -0.92
PTPRF-210ENST00000463041 EYA3Q99504 573 aa9.33□□□□□ -0.92
PTPRF-210ENST00000463041 CDHR2Q9BYE9 1310 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 EPS15P42566 896 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 SCNN1DP51172 638 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
PTPRF-210ENST00000463041 G2E3Q7L622 706 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 GPRC5DQ9NZD1 345 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 POLLQ9UGP5 575 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 COL4A5P29400 1685 aa9.32□□□□□ -0.92
PTPRF-210ENST00000463041 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 TMEM88BA6NKF7 163 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 NEURL1BA8MQ27 555 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 H7C1W4 665 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 GPSM2P81274 684 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 FLIIQ13045 1269 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 ANKRD18AQ8IVF6 992 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
PTPRF-210ENST00000463041 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
PTPRF-210ENST00000463041 ADARB2Q9NS39 739 aaKnown RBP9.31□□□□□ -0.92
PTPRF-210ENST00000463041 MYH3P11055 1940 aa9.31□□□□□ -0.92
PTPRF-210ENST00000463041 POLR2AP24928 1970 aaKnown RBP9.3□□□□□ -0.92
PTPRF-210ENST00000463041 H7C1D1 291 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 RIMBP2O15034 1052 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 RAD17O75943 681 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 GMPSP49915 693 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-210ENST00000463041 CTSWP56202 376 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 FKBP5Q13451 457 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-210ENST00000463041 GCKRQ14397 625 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 MAP1SQ66K74 1059 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-210ENST00000463041 LINS1Q8NG48 757 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 TTLL11Q8NHH1 800 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 TBC1D16Q8TBP0 767 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 DPF2Q92785 391 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 CDC5LQ99459 802 aaKnown RBP9.3□□□□□ -0.92
PTPRF-210ENST00000463041 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 PGAP2Q9UHJ9 254 aa9.3□□□□□ -0.92
PTPRF-210ENST00000463041 CNOT7Q9UIV1 285 aaKnown RBP9.3□□□□□ -0.92
PTPRF-210ENST00000463041 LRRC37AA6NMS7 1700 aa9.29□□□□□ -0.92
PTPRF-210ENST00000463041 YDJCA8MPS7 323 aa9.29□□□□□ -0.92
PTPRF-210ENST00000463041 G3V3G9 751 aa9.29□□□□□ -0.92
PTPRF-210ENST00000463041 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
PTPRF-210ENST00000463041 CWF19L2Q2TBE0 894 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms