RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 NEK1Q96PY6 1258 aa13.83□□□□□ -0.19
RBM39-223ENST00000463004 SDF4Q9BRK5 362 aa13.83□□□□□ -0.19
RBM39-223ENST00000463004 CRNKL1Q9BZJ0 848 aaKnown RBP13.83□□□□□ -0.19
RBM39-223ENST00000463004 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.19
RBM39-223ENST00000463004 RAD21O60216 631 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 MCM4P33991 863 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 SCAND2PQ9GZW5 306 aaPredicted RBP13.83□□□□□ -0.2
RBM39-223ENST00000463004 HELLSQ9NRZ9 838 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 FOXD4L6Q3SYB3 417 aaPredicted RBP13.83□□□□□ -0.2
RBM39-223ENST00000463004 FOXD4L3Q6VB84 417 aaPredicted RBP13.83□□□□□ -0.2
RBM39-223ENST00000463004 ZNF804AQ7Z570 1209 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 TICAM2Q86XR7 235 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 TBC1D2Q9BYX2 928 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 KRT23Q9C075 422 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 PLCG2P16885 1265 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 BEND3Q5T5X7 828 aa13.83□□□□□ -0.2
RBM39-223ENST00000463004 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
RBM39-223ENST00000463004 OLFM4Q6UX06 510 aa13.82□□□□□ -0.2
RBM39-223ENST00000463004 PDE4BQ07343 736 aa13.82□□□□□ -0.2
RBM39-223ENST00000463004 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
RBM39-223ENST00000463004 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
RBM39-223ENST00000463004 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
RBM39-223ENST00000463004 MROH5Q6ZUA9 1318 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 C6orf229H3BNL8 230 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 PCCAP05165 728 aaPredicted RBP13.81□□□□□ -0.2
RBM39-223ENST00000463004 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
RBM39-223ENST00000463004 EYA3Q99504 573 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 A1BGP04217 495 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 NBPF14Q5TI25 921 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 MCM5P33992 734 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
RBM39-223ENST00000463004 GNPATO15228 680 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 CHMLP26374 656 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 TNNI3KQ59H18 835 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 DENND2AQ9ULE3 1009 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 FPGT-TNNI3KV9GXZ4 949 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
RBM39-223ENST00000463004 IKQ13123 557 aaPredicted RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 RBM17Q96I25 401 aaKnown RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 GPR108Q9NPR9 543 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 KIF5BP33176 963 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 TFCP2Q12800 502 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
RBM39-223ENST00000463004 PA2G4Q9UQ80 394 aaKnown RBP13.8□□□□□ -0.2
RBM39-223ENST00000463004 SSH2Q76I76 1423 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 MAP3K15Q6ZN16 1313 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
RBM39-223ENST00000463004 TRAF1Q13077 416 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 ITSN1Q15811 1721 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 ARHGEF28Q8N1W1 1705 aaKnown RBP13.79□□□□□ -0.2
RBM39-223ENST00000463004 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 STK3Q13188 491 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 MFSD6Q6ZSS7 791 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
RBM39-223ENST00000463004 RBM8AQ9Y5S9 174 aaKnown RBP13.79□□□□□ -0.2
RBM39-223ENST00000463004 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 ZBTB38Q8NAP3 1195 aaPredicted RBP13.78□□□□□ -0.2
RBM39-223ENST00000463004 FIBPO43427 364 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 CNBD1Q8NA66 436 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 SPATA32Q96LK8 384 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
RBM39-223ENST00000463004 INTS4Q96HW7 963 aaKnown RBP13.78□□□□□ -0.2
RBM39-223ENST00000463004 NAP1L5Q96NT1 182 aaPredicted RBP13.78□□□□□ -0.2
RBM39-223ENST00000463004 TSPY26PQ9H489 355 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 PLEKHG2Q9H7P9 1386 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 ZNF772Q68DY9 489 aaPredicted RBP13.78□□□□□ -0.2
RBM39-223ENST00000463004 LPIN2Q92539 896 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
RBM39-223ENST00000463004 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.2
RBM39-223ENST00000463004 NBPF7P0C2Y1 421 aaPredicted RBP13.77□□□□□ -0.2
RBM39-223ENST00000463004 ITGA6P23229 1130 aa13.77□□□□□ -0.2
RBM39-223ENST00000463004 CCDC12Q8WUD4 166 aaPredicted RBP13.77□□□□□ -0.2
RBM39-223ENST00000463004 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.2
RBM39-223ENST00000463004 NAA16Q6N069 864 aaPredicted RBP13.77□□□□□ -0.21
RBM39-223ENST00000463004 CCDC83Q8IWF9 413 aa13.77□□□□□ -0.21
RBM39-223ENST00000463004 ZSCAN29Q8IWY8 852 aaPredicted RBP13.77□□□□□ -0.21
RBM39-223ENST00000463004 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
RBM39-223ENST00000463004 IBTKQ9P2D0 1353 aaPredicted RBP13.77□□□□□ -0.21
RBM39-223ENST00000463004 ATP5JP18859 108 aa13.77□□□□□ -0.21
RBM39-223ENST00000463004 SSFA2P28290 1259 aa13.77□□□□□ -0.21
RBM39-223ENST00000463004 GNAQP50148 359 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1610.6 ms