RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 RTKN2Q8IZC4 609 aa20.16■□□□□ 0.82
ERCC3-206ENST00000462306 GRAPLQ8TC17 118 aaPredicted RBP20.16■□□□□ 0.82
ERCC3-206ENST00000462306 SMC4Q9NTJ3 1288 aa20.16■□□□□ 0.82
ERCC3-206ENST00000462306 PTPRCP08575 1304 aa20.16■□□□□ 0.82
ERCC3-206ENST00000462306 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
ERCC3-206ENST00000462306 TAF1P21675 1872 aa20.14■□□□□ 0.81
ERCC3-206ENST00000462306 COL4A1P02462 1669 aa20.14■□□□□ 0.81
ERCC3-206ENST00000462306 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
ERCC3-206ENST00000462306 BRPF1P55201 1214 aaPredicted RBP20.14■□□□□ 0.81
ERCC3-206ENST00000462306 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
ERCC3-206ENST00000462306 CELF1Q92879 486 aaKnown RBP20.14■□□□□ 0.81
ERCC3-206ENST00000462306 ALDH1L1O75891 902 aa20.13■□□□□ 0.81
ERCC3-206ENST00000462306 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
ERCC3-206ENST00000462306 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
ERCC3-206ENST00000462306 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
ERCC3-206ENST00000462306 CTSWP56202 376 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 CCDC152Q4G0S7 254 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 GRIPAP1Q4V328 841 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 TTLL11Q8NHH1 800 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 PSMD1Q99460 953 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 PLA2G12BQ9BX93 195 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 SEC31BQ9NQW1 1179 aa20.12■□□□□ 0.81
ERCC3-206ENST00000462306 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
ERCC3-206ENST00000462306 TMC4Q7Z404 712 aa20.11■□□□□ 0.81
ERCC3-206ENST00000462306 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
ERCC3-206ENST00000462306 RPS8P62241 208 aaKnown RBP20.1■□□□□ 0.81
ERCC3-206ENST00000462306 ZNF526Q8TF50 670 aaPredicted RBP20.1■□□□□ 0.81
ERCC3-206ENST00000462306 CCDC85AQ96PX6 553 aaPredicted RBP20.1■□□□□ 0.81
ERCC3-206ENST00000462306 GRM8O00222 908 aa20.09■□□□□ 0.81
ERCC3-206ENST00000462306 NOB1Q9ULX3 412 aaKnown RBP20.09■□□□□ 0.81
ERCC3-206ENST00000462306 DICER1Q9UPY3 1922 aaKnown RBP20.09■□□□□ 0.81
ERCC3-206ENST00000462306 RTL9Q8NET4 1388 aa20.08■□□□□ 0.81
ERCC3-206ENST00000462306 LRRC37AA6NMS7 1700 aa20.08■□□□□ 0.81
ERCC3-206ENST00000462306 TIAM2Q8IVF5 1701 aa20.08■□□□□ 0.81
ERCC3-206ENST00000462306 TMX4Q9H1E5 349 aaPredicted RBP20.08■□□□□ 0.81
ERCC3-206ENST00000462306 GREM2Q9H772 168 aa20.08■□□□□ 0.81
ERCC3-206ENST00000462306 GPBP1L1Q9HC44 474 aaPredicted RBP20.08■□□□□ 0.81
ERCC3-206ENST00000462306 MYH3P11055 1940 aa20.08■□□□□ 0.8
ERCC3-206ENST00000462306 CSF1RP07333 972 aa20.07■□□□□ 0.8
ERCC3-206ENST00000462306 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
ERCC3-206ENST00000462306 RTFDC1Q9BY42 306 aaPredicted RBP20.07■□□□□ 0.8
ERCC3-206ENST00000462306 C9orf78Q9NZ63 289 aaPredicted RBP20.07■□□□□ 0.8
ERCC3-206ENST00000462306 UTYO14607 1347 aa20.06■□□□□ 0.8
ERCC3-206ENST00000462306 FOXO4P98177 505 aa20.06■□□□□ 0.8
ERCC3-206ENST00000462306 MPNDQ8N594 471 aa20.06■□□□□ 0.8
ERCC3-206ENST00000462306 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
ERCC3-206ENST00000462306 BCAR3O75815 825 aa20.05■□□□□ 0.8
ERCC3-206ENST00000462306 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
ERCC3-206ENST00000462306 ARHGAP45Q92619 1136 aa20.05■□□□□ 0.8
ERCC3-206ENST00000462306 API5Q9BZZ5 524 aaKnown RBP20.05■□□□□ 0.8
ERCC3-206ENST00000462306 COL4A5P29400 1685 aa20.04■□□□□ 0.8
ERCC3-206ENST00000462306 GLTPD2A6NH11 291 aa20.04■□□□□ 0.8
ERCC3-206ENST00000462306 NBPF7P0C2Y1 421 aaPredicted RBP20.04■□□□□ 0.8
ERCC3-206ENST00000462306 EPHA10Q5JZY3 1008 aa20.04■□□□□ 0.8
ERCC3-206ENST00000462306 ANKRD18AQ8IVF6 992 aa20.04■□□□□ 0.8
ERCC3-206ENST00000462306 CDC5LQ99459 802 aaKnown RBP20.04■□□□□ 0.8
ERCC3-206ENST00000462306 DUOX1Q9NRD9 1551 aa20.04■□□□□ 0.8
ERCC3-206ENST00000462306 FAM161AQ3B820 660 aa20.03■□□□□ 0.8
ERCC3-206ENST00000462306 KAZALD1Q96I82 304 aa20.03■□□□□ 0.8
ERCC3-206ENST00000462306 NMRK2Q9NPI5 230 aa20.03■□□□□ 0.8
ERCC3-206ENST00000462306 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 ITGA6P23229 1130 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 GPSM2P81274 684 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 SUCLG2Q96I99 432 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 USP44Q9H0E7 712 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 VPS33BQ9H267 617 aa20.02■□□□□ 0.8
ERCC3-206ENST00000462306 NSFL1CQ9UNZ2 370 aaKnown RBP20.02■□□□□ 0.8
ERCC3-206ENST00000462306 LTBP1Q14766 1721 aa20.02■□□□□ 0.79
ERCC3-206ENST00000462306 FZD9O00144 591 aa20.01■□□□□ 0.79
ERCC3-206ENST00000462306 KIF3CO14782 793 aa20.01■□□□□ 0.79
ERCC3-206ENST00000462306 CCT4P50991 539 aaKnown RBP20.01■□□□□ 0.79
ERCC3-206ENST00000462306 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
ERCC3-206ENST00000462306 LARGE2Q8N3Y3 721 aa20.01■□□□□ 0.79
ERCC3-206ENST00000462306 BSDC1Q9NW68 430 aaPredicted RBP20.01■□□□□ 0.79
ERCC3-206ENST00000462306 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
ERCC3-206ENST00000462306 PPIP5K2O43314 1243 aa20■□□□□ 0.79
ERCC3-206ENST00000462306 KIAA2012Q0VF49 1180 aa20■□□□□ 0.79
ERCC3-206ENST00000462306 AOC3Q16853 763 aa20■□□□□ 0.79
ERCC3-206ENST00000462306 DPY19L2Q6NUT2 758 aa20■□□□□ 0.79
ERCC3-206ENST00000462306 JDP2Q8WYK2 163 aa20■□□□□ 0.79
ERCC3-206ENST00000462306 POLLQ9UGP5 575 aa20■□□□□ 0.79
ERCC3-206ENST00000462306 IPO8O15397 1037 aaKnown RBP19.99■□□□□ 0.79
ERCC3-206ENST00000462306 TRIM27P14373 513 aa19.99■□□□□ 0.79
ERCC3-206ENST00000462306 ZNF541Q9H0D2 1346 aa19.99■□□□□ 0.79
ERCC3-206ENST00000462306 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
ERCC3-206ENST00000462306 DDNO94850 711 aaPredicted RBP19.98■□□□□ 0.79
ERCC3-206ENST00000462306 ATF7IPQ6VMQ6 1270 aa19.98■□□□□ 0.79
ERCC3-206ENST00000462306 TBC1D16Q8TBP0 767 aa19.98■□□□□ 0.79
ERCC3-206ENST00000462306 FRAT1Q92837 279 aaPredicted RBP19.98■□□□□ 0.79
ERCC3-206ENST00000462306 RRAGCQ9HB90 399 aa19.98■□□□□ 0.79
ERCC3-206ENST00000462306 MINPP1Q9UNW1 487 aa19.98■□□□□ 0.79
ERCC3-206ENST00000462306 TNNQ9UQP3 1299 aa19.98■□□□□ 0.79
ERCC3-206ENST00000462306 POTECB2RU33 542 aa19.97■□□□□ 0.79
ERCC3-206ENST00000462306 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
ERCC3-206ENST00000462306 IFIT5Q13325 482 aaKnown RBP19.97■□□□□ 0.79
ERCC3-206ENST00000462306 RABL6Q3YEC7 729 aaPredicted RBP19.97■□□□□ 0.79
ERCC3-206ENST00000462306 INTS3Q68E01 1043 aaKnown RBP19.97■□□□□ 0.79
ERCC3-206ENST00000462306 BICC1Q9H694 974 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms