RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 CNTNAP1P78357 1384 aa15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 SCNN1DP51172 638 aa15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 MAP1SQ66K74 1059 aaPredicted RBP15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 ZNF428Q96B54 188 aa15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 ZNRF3Q9ULT6 936 aa15.41■□□□□ 0.06
SCAMP3-203ENST00000462151 EPS15P42566 896 aa15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 USP50Q70EL3 339 aaPredicted RBP15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 RIC3Q7Z5B4 369 aa15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 DDX60Q8IY21 1712 aaKnown RBP15.4■□□□□ 0.06
SCAMP3-203ENST00000462151 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
SCAMP3-203ENST00000462151 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
SCAMP3-203ENST00000462151 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
SCAMP3-203ENST00000462151 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
SCAMP3-203ENST00000462151 CXCL9Q07325 125 aa15.38■□□□□ 0.05
SCAMP3-203ENST00000462151 CCDC30Q5VVM6 783 aa15.38■□□□□ 0.05
SCAMP3-203ENST00000462151 ADARB2Q9NS39 739 aaKnown RBP15.38■□□□□ 0.05
SCAMP3-203ENST00000462151 CDHR2Q9BYE9 1310 aa15.38■□□□□ 0.05
SCAMP3-203ENST00000462151 TNIP1Q15025 636 aa15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 CIAPIN1Q6FI81 312 aa15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 GPRC5DQ9NZD1 345 aa15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 TAF1P21675 1872 aa15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
SCAMP3-203ENST00000462151 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
SCAMP3-203ENST00000462151 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
SCAMP3-203ENST00000462151 CELF1Q92879 486 aaKnown RBP15.36■□□□□ 0.05
SCAMP3-203ENST00000462151 MYD88Q99836 296 aa15.36■□□□□ 0.05
SCAMP3-203ENST00000462151 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
SCAMP3-203ENST00000462151 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
SCAMP3-203ENST00000462151 RAD17O75943 681 aa15.35■□□□□ 0.05
SCAMP3-203ENST00000462151 VEGFBP49765 207 aa15.35■□□□□ 0.05
SCAMP3-203ENST00000462151 GMPSP49915 693 aaPredicted RBP15.35■□□□□ 0.05
SCAMP3-203ENST00000462151 TNS4Q8IZW8 715 aa15.35■□□□□ 0.05
SCAMP3-203ENST00000462151 NSFL1CQ9UNZ2 370 aaKnown RBP15.35■□□□□ 0.05
SCAMP3-203ENST00000462151 ZEB1P37275 1124 aaPredicted RBP15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 WASHC4Q2M389 1173 aa15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 BCL2L13Q9BXK5 485 aa15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 CWC25Q9NXE8 425 aaPredicted RBP15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 ABT1Q9ULW3 272 aaKnown RBP15.34■□□□□ 0.05
SCAMP3-203ENST00000462151 C6orf229H3BNL8 230 aa15.33■□□□□ 0.04
SCAMP3-203ENST00000462151 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
SCAMP3-203ENST00000462151 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
SCAMP3-203ENST00000462151 EYA3Q99504 573 aa15.33■□□□□ 0.04
SCAMP3-203ENST00000462151 YDJCA8MPS7 323 aa15.32■□□□□ 0.04
SCAMP3-203ENST00000462151 GPSM2P81274 684 aa15.32■□□□□ 0.04
SCAMP3-203ENST00000462151 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
SCAMP3-203ENST00000462151 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
SCAMP3-203ENST00000462151 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
SCAMP3-203ENST00000462151 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
SCAMP3-203ENST00000462151 PDE8AO60658 829 aa15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 WWC1Q8IX03 1113 aa15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 ZC3H15Q8WU90 426 aaKnown RBP15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 DBNDD1Q9H9R9 158 aa15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 POLLQ9UGP5 575 aa15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 MAP3K2Q9Y2U5 619 aa15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 IL16Q14005 1332 aa15.31■□□□□ 0.04
SCAMP3-203ENST00000462151 H7C1D1 291 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 TRAF5O00463 557 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 FOXN1O15353 648 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 COL4A1P02462 1669 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 FMR1Q06787 632 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 NEXNQ0ZGT2 675 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 TBC1D16Q8TBP0 767 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 DPF2Q92785 391 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 SEC31BQ9NQW1 1179 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 PGAP2Q9UHJ9 254 aa15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
SCAMP3-203ENST00000462151 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 PSMD14O00487 310 aa15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 ECE2O60344 883 aa15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 TWISTNBQ3B726 338 aaPredicted RBP15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 WBP1LQ9NX94 342 aa15.29■□□□□ 0.04
SCAMP3-203ENST00000462151 ANP32CO43423 234 aa15.28■□□□□ 0.04
SCAMP3-203ENST00000462151 RPS12P25398 132 aaKnown RBP15.28■□□□□ 0.04
SCAMP3-203ENST00000462151 ECE1P42892 770 aa15.28■□□□□ 0.04
SCAMP3-203ENST00000462151 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
SCAMP3-203ENST00000462151 HIRAP54198 1017 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms