RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
RBM39-222ENST00000461849 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 TMC4Q7Z404 712 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 MPNDQ8N594 471 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 VPS33BQ9H267 617 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 GJA3Q9Y6H8 435 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 LAMB2P55268 1798 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 SCN4AP35499 1836 aa17.7■□□□□ 0.42
RBM39-222ENST00000461849 HTRA3P83110 453 aa17.7■□□□□ 0.42
RBM39-222ENST00000461849 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
RBM39-222ENST00000461849 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
RBM39-222ENST00000461849 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
RBM39-222ENST00000461849 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
RBM39-222ENST00000461849 EAPPQ56P03 285 aaPredicted RBP17.69■□□□□ 0.42
RBM39-222ENST00000461849 CCDC191Q8NCU4 936 aa17.69■□□□□ 0.42
RBM39-222ENST00000461849 CLEC11AQ9Y240 323 aa17.69■□□□□ 0.42
RBM39-222ENST00000461849 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
RBM39-222ENST00000461849 EPHX2P34913 555 aa17.68■□□□□ 0.42
RBM39-222ENST00000461849 AOC3Q16853 763 aa17.68■□□□□ 0.42
RBM39-222ENST00000461849 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
RBM39-222ENST00000461849 PNMA8AQ86V59 439 aaPredicted RBP17.68■□□□□ 0.42
RBM39-222ENST00000461849 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
RBM39-222ENST00000461849 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
RBM39-222ENST00000461849 DNAJC5GQ8N7S2 189 aa17.68■□□□□ 0.42
RBM39-222ENST00000461849 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
RBM39-222ENST00000461849 METTL22Q9BUU2 404 aaPredicted RBP17.68■□□□□ 0.42
RBM39-222ENST00000461849 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
RBM39-222ENST00000461849 MAP3K2Q9Y2U5 619 aa17.68■□□□□ 0.42
RBM39-222ENST00000461849 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
RBM39-222ENST00000461849 POTEIP0CG38 1075 aa17.67■□□□□ 0.42
RBM39-222ENST00000461849 POTEJP0CG39 1038 aa17.67■□□□□ 0.42
RBM39-222ENST00000461849 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
RBM39-222ENST00000461849 KLRG1Q96E93 195 aa17.67■□□□□ 0.42
RBM39-222ENST00000461849 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
RBM39-222ENST00000461849 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
RBM39-222ENST00000461849 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
RBM39-222ENST00000461849 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
RBM39-222ENST00000461849 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
RBM39-222ENST00000461849 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
RBM39-222ENST00000461849 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
RBM39-222ENST00000461849 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
RBM39-222ENST00000461849 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
RBM39-222ENST00000461849 ZNRF3Q9ULT6 936 aa17.65■□□□□ 0.42
RBM39-222ENST00000461849 NSFL1CQ9UNZ2 370 aaKnown RBP17.65■□□□□ 0.42
RBM39-222ENST00000461849 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.41
RBM39-222ENST00000461849 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
RBM39-222ENST00000461849 COL4A5P29400 1685 aa17.64■□□□□ 0.41
RBM39-222ENST00000461849 TAF1P21675 1872 aa17.63■□□□□ 0.41
RBM39-222ENST00000461849 PDE8AO60658 829 aa17.63■□□□□ 0.41
RBM39-222ENST00000461849 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
RBM39-222ENST00000461849 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
RBM39-222ENST00000461849 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
RBM39-222ENST00000461849 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
RBM39-222ENST00000461849 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
RBM39-222ENST00000461849 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
RBM39-222ENST00000461849 FLIIQ13045 1269 aa17.61■□□□□ 0.41
RBM39-222ENST00000461849 FKBP5Q13451 457 aaPredicted RBP17.61■□□□□ 0.41
RBM39-222ENST00000461849 CIAPIN1Q6FI81 312 aa17.61■□□□□ 0.41
RBM39-222ENST00000461849 CCDC85AQ96PX6 553 aaPredicted RBP17.61■□□□□ 0.41
RBM39-222ENST00000461849 EYA3Q99504 573 aa17.61■□□□□ 0.41
RBM39-222ENST00000461849 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
RBM39-222ENST00000461849 SCNN1DP51172 638 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 CXCL9Q07325 125 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 TNIP1Q15025 636 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 G2E3Q7L622 706 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 PCNTO95613 3336 aa17.6■□□□□ 0.41
RBM39-222ENST00000461849 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 VAMP4O75379 141 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 RAD17O75943 681 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
RBM39-222ENST00000461849 EPS15P42566 896 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 GPSM2P81274 684 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 CWF19L2Q2TBE0 894 aaKnown RBP17.59■□□□□ 0.41
RBM39-222ENST00000461849 MAP1SQ66K74 1059 aaPredicted RBP17.59■□□□□ 0.41
RBM39-222ENST00000461849 USP50Q70EL3 339 aaPredicted RBP17.59■□□□□ 0.41
RBM39-222ENST00000461849 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 ANKIB1Q9P2G1 1089 aa17.59■□□□□ 0.41
RBM39-222ENST00000461849 LRRC37AA6NMS7 1700 aa17.58■□□□□ 0.41
RBM39-222ENST00000461849 PASKQ96RG2 1323 aa17.58■□□□□ 0.4
RBM39-222ENST00000461849 NEURL1BA8MQ27 555 aa17.58■□□□□ 0.4
RBM39-222ENST00000461849 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
RBM39-222ENST00000461849 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
RBM39-222ENST00000461849 ADARB2Q9NS39 739 aaKnown RBP17.58■□□□□ 0.4
RBM39-222ENST00000461849 G3V3G9 751 aa17.57■□□□□ 0.4
RBM39-222ENST00000461849 CTSWP56202 376 aa17.57■□□□□ 0.4
RBM39-222ENST00000461849 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
RBM39-222ENST00000461849 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
RBM39-222ENST00000461849 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
RBM39-222ENST00000461849 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
RBM39-222ENST00000461849 GPRC5DQ9NZD1 345 aa17.57■□□□□ 0.4
RBM39-222ENST00000461849 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
RBM39-222ENST00000461849 TMEM88BA6NKF7 163 aa17.56■□□□□ 0.4
RBM39-222ENST00000461849 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms