RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 CCT4P50991 539 aaKnown RBP10.19□□□□□ -0.78
HDAC9-219ENST00000461159 BEND3Q5T5X7 828 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 CEP85Q6P2H3 762 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 KSR2Q6VAB6 950 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 GAS2L3Q86XJ1 694 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 MPNDQ8N594 471 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 GCC1Q96CN9 775 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 MYD88Q99836 296 aa10.19□□□□□ -0.78
HDAC9-219ENST00000461159 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
HDAC9-219ENST00000461159 LRRFIP2Q9Y608 721 aaKnown RBP10.19□□□□□ -0.78
HDAC9-219ENST00000461159 KCPQ6ZWJ8 1503 aa10.18□□□□□ -0.78
HDAC9-219ENST00000461159 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
HDAC9-219ENST00000461159 ZKSCAN8Q15776 578 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-219ENST00000461159 RNF217Q8TC41 542 aa10.18□□□□□ -0.78
HDAC9-219ENST00000461159 ZBTB1Q9Y2K1 713 aa10.18□□□□□ -0.78
HDAC9-219ENST00000461159 N4BP2Q86UW6 1770 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-219ENST00000461159 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
HDAC9-219ENST00000461159 TIGD1Q96MW7 591 aa10.18□□□□□ -0.78
HDAC9-219ENST00000461159 IBTKQ9P2D0 1353 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-219ENST00000461159 TRIM6-TRIM34B2RNG4 842 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 IGKV5-2P06315 115 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 NASPP49321 788 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-219ENST00000461159 EP400NLQ6ZTU2 488 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 PPP1R9BQ96SB3 815 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 NCAPGQ9BPX3 1015 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 TRIM34Q9BYJ4 488 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 PNMA6EA0A0J9YXQ4 647 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 SIK1P57059 783 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 ITPK1Q13572 414 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 CT47A1Q5JQC4 288 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-219ENST00000461159 ANKRD45Q5TZF3 282 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 TMTC2Q8N394 836 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 C9orf78Q9NZ63 289 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-219ENST00000461159 TBC1D2BQ9UPU7 963 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 KIF3AQ9Y496 699 aa10.17□□□□□ -0.78
HDAC9-219ENST00000461159 WNK3Q9BYP7 1800 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 UQCRHLA0A096LP55 91 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 UQCRHP07919 91 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 UBTFL1P0CB47 393 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-219ENST00000461159 KLHL40Q2TBA0 621 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 ZSCAN30Q86W11 494 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 ANKRD44Q8N8A2 993 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 STARD3NLO95772 234 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
HDAC9-219ENST00000461159 CYP19A1P11511 503 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-219ENST00000461159 C16orf71Q8IYS4 520 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-219ENST00000461159 KIF2CQ99661 725 aa10.16□□□□□ -0.78
HDAC9-219ENST00000461159 DDX49Q9Y6V7 483 aaKnown RBP10.16□□□□□ -0.78
HDAC9-219ENST00000461159 PALLDQ8WX93 1383 aa10.15□□□□□ -0.78
HDAC9-219ENST00000461159 SMARCA5O60264 1052 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-219ENST00000461159 GNAI2P04899 355 aa10.15□□□□□ -0.78
HDAC9-219ENST00000461159 MSNP26038 577 aaKnown RBP10.15□□□□□ -0.78
HDAC9-219ENST00000461159 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.78
HDAC9-219ENST00000461159 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
HDAC9-219ENST00000461159 PXDNLA1KZ92 1463 aa10.15□□□□□ -0.78
HDAC9-219ENST00000461159 ARID4AP29374 1257 aaPredicted RBP10.15□□□□□ -0.79
HDAC9-219ENST00000461159 HSP90AB4PQ58FF6 505 aa10.15□□□□□ -0.79
HDAC9-219ENST00000461159 TBC1D9Q6ZT07 1266 aa10.15□□□□□ -0.79
HDAC9-219ENST00000461159 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 ATRNO75882 1429 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 CDC45O75419 566 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 TRIM37O94972 964 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 GPTP24298 496 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 SSFA2P28290 1259 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 HLFQ16534 295 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 CTR9Q6PD62 1173 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 OTUD7AQ8TE49 926 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-219ENST00000461159 FAM177BA6PVY3 158 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 NUCB2P80303 420 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 NEXNQ0ZGT2 675 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 DCTPP1Q9H773 170 aa10.14□□□□□ -0.79
HDAC9-219ENST00000461159 NEURL1BA8MQ27 555 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 BAG4O95429 457 aaKnown RBP10.13□□□□□ -0.79
HDAC9-219ENST00000461159 GNAI3P08754 354 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
HDAC9-219ENST00000461159 CCDC96Q2M329 555 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 UBE3BQ7Z3V4 1068 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 SYNE4Q8N205 404 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 LINS1Q8NG48 757 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 METTL22Q9BUU2 404 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-219ENST00000461159 CD2BP2O95400 341 aaKnown RBP10.13□□□□□ -0.79
HDAC9-219ENST00000461159 RABEP1Q15276 862 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 PPP1R42Q7Z4L9 355 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-219ENST00000461159 KLHDC4Q8TBB5 520 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 KAZALD1Q96I82 304 aa10.13□□□□□ -0.79
HDAC9-219ENST00000461159 RGS17Q9UGC6 210 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-219ENST00000461159 GRM8O00222 908 aa10.12□□□□□ -0.79
HDAC9-219ENST00000461159 SRGAP3O43295 1099 aa10.12□□□□□ -0.79
HDAC9-219ENST00000461159 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-219ENST00000461159 CAPN2P17655 700 aa10.12□□□□□ -0.79
HDAC9-219ENST00000461159 ZNF445P59923 1031 aa10.12□□□□□ -0.79
HDAC9-219ENST00000461159 KRT27Q7Z3Y8 459 aa10.12□□□□□ -0.79
HDAC9-219ENST00000461159 PLBD2Q8NHP8 589 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms