RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
CSDC2-202ENST00000460790 IFIT5Q13325 482 aaKnown RBP13.5□□□□□ -0.25
CSDC2-202ENST00000460790 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
CSDC2-202ENST00000460790 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
CSDC2-202ENST00000460790 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
CSDC2-202ENST00000460790 APBB1O00213 710 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
CSDC2-202ENST00000460790 DDR1Q08345 913 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 SF3B3Q15393 1217 aaKnown RBP13.49□□□□□ -0.25
CSDC2-202ENST00000460790 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 RHPN1Q8TCX5 695 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 GREM2Q9H772 168 aa13.49□□□□□ -0.25
CSDC2-202ENST00000460790 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
CSDC2-202ENST00000460790 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-202ENST00000460790 ITGA6P23229 1130 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 PDE4AP27815 886 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-202ENST00000460790 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 PRR5LQ6MZQ0 368 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-202ENST00000460790 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
CSDC2-202ENST00000460790 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 NPHP1O15259 732 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 SASH1O94885 1247 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 RGS3P49796 1198 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 ZNF594Q96JF6 807 aaPredicted RBP13.47□□□□□ -0.25
CSDC2-202ENST00000460790 SIL1Q9H173 461 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
CSDC2-202ENST00000460790 EYA2O00167 538 aa13.46□□□□□ -0.25
CSDC2-202ENST00000460790 CIAO1O76071 339 aa13.46□□□□□ -0.25
CSDC2-202ENST00000460790 MMP10P09238 476 aa13.46□□□□□ -0.25
CSDC2-202ENST00000460790 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
CSDC2-202ENST00000460790 ATG9AQ7Z3C6 839 aa13.46□□□□□ -0.25
CSDC2-202ENST00000460790 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
CSDC2-202ENST00000460790 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
CSDC2-202ENST00000460790 TAF1P21675 1872 aa13.46□□□□□ -0.26
CSDC2-202ENST00000460790 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
CSDC2-202ENST00000460790 IL15P40933 162 aaPredicted RBP13.45□□□□□ -0.26
CSDC2-202ENST00000460790 ST5P78524 1137 aa13.45□□□□□ -0.26
CSDC2-202ENST00000460790 TAF7LQ5H9L4 462 aa13.45□□□□□ -0.26
CSDC2-202ENST00000460790 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
CSDC2-202ENST00000460790 PUS3Q9BZE2 481 aaKnown RBP13.45□□□□□ -0.26
CSDC2-202ENST00000460790 PDGFDQ9GZP0 370 aaPredicted RBP13.45□□□□□ -0.26
CSDC2-202ENST00000460790 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
CSDC2-202ENST00000460790 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
CSDC2-202ENST00000460790 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
CSDC2-202ENST00000460790 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
CSDC2-202ENST00000460790 ILDR2Q71H61 639 aa13.44□□□□□ -0.26
CSDC2-202ENST00000460790 PLEKHM2Q8IWE5 1019 aa13.44□□□□□ -0.26
CSDC2-202ENST00000460790 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
CSDC2-202ENST00000460790 IL1RAPL2Q9NP60 686 aa13.44□□□□□ -0.26
CSDC2-202ENST00000460790 KLRG2A4D1S0 409 aaPredicted RBP13.43□□□□□ -0.26
CSDC2-202ENST00000460790 TFCP2Q12800 502 aa13.43□□□□□ -0.26
CSDC2-202ENST00000460790 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
CSDC2-202ENST00000460790 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
CSDC2-202ENST00000460790 ANKRD31Q8N7Z5 1873 aa13.43□□□□□ -0.26
CSDC2-202ENST00000460790 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
CSDC2-202ENST00000460790 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
CSDC2-202ENST00000460790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.43□□□□□ -0.26
CSDC2-202ENST00000460790 TNRC6CQ9HCJ0 1690 aaKnown RBP13.43□□□□□ -0.26
CSDC2-202ENST00000460790 SPEF2Q9C093 1822 aa13.42□□□□□ -0.26
CSDC2-202ENST00000460790 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
CSDC2-202ENST00000460790 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
CSDC2-202ENST00000460790 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
CSDC2-202ENST00000460790 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
CSDC2-202ENST00000460790 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
CSDC2-202ENST00000460790 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
CSDC2-202ENST00000460790 SALL3Q9BXA9 1300 aa13.41□□□□□ -0.26
CSDC2-202ENST00000460790 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
CSDC2-202ENST00000460790 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
CSDC2-202ENST00000460790 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
CSDC2-202ENST00000460790 EAF2Q96CJ1 260 aaPredicted RBP13.41□□□□□ -0.26
CSDC2-202ENST00000460790 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
CSDC2-202ENST00000460790 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
CSDC2-202ENST00000460790 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
CSDC2-202ENST00000460790 STAP2Q9UGK3 403 aa13.41□□□□□ -0.26
CSDC2-202ENST00000460790 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
CSDC2-202ENST00000460790 PDE1AP54750 535 aa13.4□□□□□ -0.26
CSDC2-202ENST00000460790 TNNI3KQ59H18 835 aa13.4□□□□□ -0.26
CSDC2-202ENST00000460790 AACSQ86V21 672 aa13.4□□□□□ -0.26
CSDC2-202ENST00000460790 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
CSDC2-202ENST00000460790 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
CSDC2-202ENST00000460790 FPGT-TNNI3KV9GXZ4 949 aa13.4□□□□□ -0.26
CSDC2-202ENST00000460790 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 LRP5O75197 1615 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
CSDC2-202ENST00000460790 MX1P20591 662 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 PDE6BP35913 854 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
CSDC2-202ENST00000460790 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 VGLL2Q8N8G2 317 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms