RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
ERCC3-205ENST00000460485 DDIT3P35638 169 aa17.12■□□□□ 0.33
ERCC3-205ENST00000460485 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
ERCC3-205ENST00000460485 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
ERCC3-205ENST00000460485 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
ERCC3-205ENST00000460485 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
ERCC3-205ENST00000460485 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
ERCC3-205ENST00000460485 TRIM28Q13263 835 aaKnown RBP17.11■□□□□ 0.33
ERCC3-205ENST00000460485 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
ERCC3-205ENST00000460485 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
ERCC3-205ENST00000460485 A0A087WZG4 1122 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 NBPF26B4DH59 902 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 H7C1W4 665 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 TOMM70O94826 608 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 NBPF10Q6P3W6 841 aaKnown RBP17.1■□□□□ 0.33
ERCC3-205ENST00000460485 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 NBPF15Q8N660 670 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
ERCC3-205ENST00000460485 GPR108Q9NPR9 543 aa17.1■□□□□ 0.33
ERCC3-205ENST00000460485 SGSM2O43147 1006 aa17.09■□□□□ 0.33
ERCC3-205ENST00000460485 CASP7P55210 303 aa17.09■□□□□ 0.33
ERCC3-205ENST00000460485 NUP98P52948 1817 aa17.08■□□□□ 0.33
ERCC3-205ENST00000460485 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 KIAA1211Q6ZU35 1233 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 AACSQ86V21 672 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
ERCC3-205ENST00000460485 SASH1O94885 1247 aa17.06■□□□□ 0.32
ERCC3-205ENST00000460485 RFX5P48382 616 aaPredicted RBP17.06■□□□□ 0.32
ERCC3-205ENST00000460485 NUCB2P80303 420 aa17.06■□□□□ 0.32
ERCC3-205ENST00000460485 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
ERCC3-205ENST00000460485 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
ERCC3-205ENST00000460485 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
ERCC3-205ENST00000460485 LAMB2P55268 1798 aa17.06■□□□□ 0.32
ERCC3-205ENST00000460485 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
ERCC3-205ENST00000460485 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
ERCC3-205ENST00000460485 CIAO1O76071 339 aa17.05■□□□□ 0.32
ERCC3-205ENST00000460485 HSPA4P34932 840 aa17.05■□□□□ 0.32
ERCC3-205ENST00000460485 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
ERCC3-205ENST00000460485 PIGBQ92521 554 aa17.05■□□□□ 0.32
ERCC3-205ENST00000460485 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
ERCC3-205ENST00000460485 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
ERCC3-205ENST00000460485 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
ERCC3-205ENST00000460485 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
ERCC3-205ENST00000460485 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
ERCC3-205ENST00000460485 PTPN12Q05209 780 aaKnown RBP17.04■□□□□ 0.32
ERCC3-205ENST00000460485 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
ERCC3-205ENST00000460485 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
ERCC3-205ENST00000460485 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
ERCC3-205ENST00000460485 MAP3K15Q6ZN16 1313 aa17.03■□□□□ 0.32
ERCC3-205ENST00000460485 PCCAP05165 728 aaPredicted RBP17.03■□□□□ 0.32
ERCC3-205ENST00000460485 ATP5JP18859 108 aa17.03■□□□□ 0.32
ERCC3-205ENST00000460485 GSE1Q14687 1217 aa17.03■□□□□ 0.32
ERCC3-205ENST00000460485 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
ERCC3-205ENST00000460485 CLEC17AQ6ZS10 378 aa17.03■□□□□ 0.32
ERCC3-205ENST00000460485 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
ERCC3-205ENST00000460485 ABCC12Q96J65 1359 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 A1BGP04217 495 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 MCM4P33991 863 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
ERCC3-205ENST00000460485 PRELPP51888 382 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.32
ERCC3-205ENST00000460485 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.32
ERCC3-205ENST00000460485 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
ERCC3-205ENST00000460485 FOXO4P98177 505 aa17.01■□□□□ 0.31
ERCC3-205ENST00000460485 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
ERCC3-205ENST00000460485 GIGYF2Q6Y7W6 1299 aaKnown RBP17.01■□□□□ 0.31
ERCC3-205ENST00000460485 KLRG1Q96E93 195 aa17.01■□□□□ 0.31
ERCC3-205ENST00000460485 AK7Q96M32 723 aa17.01■□□□□ 0.31
ERCC3-205ENST00000460485 BCORQ6W2J9 1755 aa17.01■□□□□ 0.31
ERCC3-205ENST00000460485 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
ERCC3-205ENST00000460485 ZNF609O15014 1411 aa17■□□□□ 0.31
ERCC3-205ENST00000460485 RGL2O15211 777 aa17■□□□□ 0.31
ERCC3-205ENST00000460485 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
ERCC3-205ENST00000460485 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
ERCC3-205ENST00000460485 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
ERCC3-205ENST00000460485 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
ERCC3-205ENST00000460485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
ERCC3-205ENST00000460485 TM6SF1Q9BZW5 370 aa17■□□□□ 0.31
ERCC3-205ENST00000460485 LSG1Q9H089 658 aaKnown RBP17■□□□□ 0.31
ERCC3-205ENST00000460485 MYH7P12883 1935 aa17■□□□□ 0.31
ERCC3-205ENST00000460485 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
ERCC3-205ENST00000460485 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
ERCC3-205ENST00000460485 CD2BP2O95400 341 aaKnown RBP16.99■□□□□ 0.31
ERCC3-205ENST00000460485 LRRFIP1Q32MZ4 808 aaKnown RBP16.99■□□□□ 0.31
ERCC3-205ENST00000460485 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
ERCC3-205ENST00000460485 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
ERCC3-205ENST00000460485 KCNB2Q92953 911 aa16.99■□□□□ 0.31
ERCC3-205ENST00000460485 RBM42Q9BTD8 480 aaKnown RBP16.99■□□□□ 0.31
ERCC3-205ENST00000460485 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
ERCC3-205ENST00000460485 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
ERCC3-205ENST00000460485 EYA2O00167 538 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms