RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
CLIP4-208ENST00000456385 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
CLIP4-208ENST00000456385 AOPEPQ8N6M6 819 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 IPO4Q8TEX9 1081 aaKnown RBP12.1□□□□□ -0.47
CLIP4-208ENST00000456385 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 PPP1R13BQ96KQ4 1090 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 L2HGDHQ9H9P8 463 aa12.1□□□□□ -0.47
CLIP4-208ENST00000456385 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 DNAJC2Q99543 621 aaKnown RBP12.09□□□□□ -0.47
CLIP4-208ENST00000456385 CRYBG1Q9Y4K1 1723 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-208ENST00000456385 H3BQV1 296 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLIP4-208ENST00000456385 ANKRD1Q15327 319 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-208ENST00000456385 AACSQ86V21 672 aa12.09□□□□□ -0.47
CLIP4-208ENST00000456385 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-208ENST00000456385 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-208ENST00000456385 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 POLR3GO15318 223 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-208ENST00000456385 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
CLIP4-208ENST00000456385 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-208ENST00000456385 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
CLIP4-208ENST00000456385 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 KCND1Q9NSA2 647 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
CLIP4-208ENST00000456385 SETD1AO15047 1707 aaKnown RBP12.07□□□□□ -0.48
CLIP4-208ENST00000456385 KDRP35968 1356 aa12.07□□□□□ -0.48
CLIP4-208ENST00000456385 DNAAF4Q8WXU2 420 aa12.07□□□□□ -0.48
CLIP4-208ENST00000456385 TRIM34Q9BYJ4 488 aa12.07□□□□□ -0.48
CLIP4-208ENST00000456385 BOLA2Q9H3K6 86 aa12.07□□□□□ -0.48
CLIP4-208ENST00000456385 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
CLIP4-208ENST00000456385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLIP4-208ENST00000456385 SEC31AO94979 1220 aaKnown RBP12.06□□□□□ -0.48
CLIP4-208ENST00000456385 SLC20A2Q08357 652 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 RAD51AP2Q09MP3 1159 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 GPATCH3Q96I76 525 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 LRRC2Q9BYS8 371 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 AKAP12Q02952 1782 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-208ENST00000456385 ZRANB2O95218 330 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLIP4-208ENST00000456385 AMPHP49418 695 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-208ENST00000456385 FSD1Q9BTV5 496 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 OSBPL5Q9H0X9 879 aaPredicted RBP12.06□□□□□ -0.48
CLIP4-208ENST00000456385 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
CLIP4-208ENST00000456385 ANO10Q9NW15 660 aa12.06□□□□□ -0.48
CLIP4-208ENST00000456385 FANCGO15287 622 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 CTAGE5O15320 804 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 KINO60870 393 aaKnown RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 GSDMDP57764 484 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 FAM193AP78312 1265 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 ST5P78524 1137 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 TMC6Q7Z403 805 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 ENGASEQ8NFI3 743 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 USP28Q96RU2 1077 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 XPO4Q9C0E2 1151 aaKnown RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 SPATA31D1Q6ZQQ2 1576 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 SMC2O95347 1197 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 CHGBP05060 677 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 SCRN1Q12765 414 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 ALDH8A1Q9H2A2 487 aaPredicted RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 ZSCAN16Q9H4T2 348 aaPredicted RBP12.05□□□□□ -0.48
CLIP4-208ENST00000456385 IFNKQ9P0W0 207 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 RCOR1Q9UKL0 485 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 USP31Q70CQ4 1352 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 ITSN1Q15811 1721 aa12.05□□□□□ -0.48
CLIP4-208ENST00000456385 SASH1O94885 1247 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 DPCR1Q3MIW9 517 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 Q6ZUG5 572 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 ORC3Q9UBD5 711 aaPredicted RBP12.04□□□□□ -0.48
CLIP4-208ENST00000456385 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 CHD2O14647 1828 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms