RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 TRIM28Q13263 835 aaKnown RBP28.17■■■□□ 2.1
SEC22C-213ENST00000456222 DPP8Q6V1X1 898 aaPredicted RBP28.17■■■□□ 2.1
SEC22C-213ENST00000456222 TSR2Q969E8 191 aaKnown RBP28.17■■■□□ 2.1
SEC22C-213ENST00000456222 CLEC11AQ9Y240 323 aa28.17■■■□□ 2.1
SEC22C-213ENST00000456222 EPS15P42566 896 aa28.16■■■□□ 2.1
SEC22C-213ENST00000456222 MAP1SQ66K74 1059 aaPredicted RBP28.16■■■□□ 2.1
SEC22C-213ENST00000456222 RIC3Q7Z5B4 369 aa28.16■■■□□ 2.1
SEC22C-213ENST00000456222 MPNDQ8N594 471 aa28.16■■■□□ 2.1
SEC22C-213ENST00000456222 CELF1Q92879 486 aaKnown RBP28.16■■■□□ 2.1
SEC22C-213ENST00000456222 TMX4Q9H1E5 349 aaPredicted RBP28.16■■■□□ 2.1
SEC22C-213ENST00000456222 SF3B3Q15393 1217 aaKnown RBP28.15■■■□□ 2.1
SEC22C-213ENST00000456222 MKRN1Q9UHC7 482 aaKnown RBP28.15■■■□□ 2.1
SEC22C-213ENST00000456222 GOLGA2Q08379 1002 aa28.14■■■□□ 2.1
SEC22C-213ENST00000456222 PNMA8AQ86V59 439 aaPredicted RBP28.14■■■□□ 2.1
SEC22C-213ENST00000456222 IRS4O14654 1257 aaPredicted RBP28.13■■■□□ 2.09
SEC22C-213ENST00000456222 CXCL9Q07325 125 aa28.13■■■□□ 2.09
SEC22C-213ENST00000456222 MYD88Q99836 296 aa28.13■■■□□ 2.09
SEC22C-213ENST00000456222 KIAA2012Q0VF49 1180 aa28.12■■■□□ 2.09
SEC22C-213ENST00000456222 CNTROBQ8N137 903 aa28.12■■■□□ 2.09
SEC22C-213ENST00000456222 SUPT20HQ8NEM7 779 aa28.12■■■□□ 2.09
SEC22C-213ENST00000456222 VPS33BQ9H267 617 aa28.12■■■□□ 2.09
SEC22C-213ENST00000456222 ZNRF3Q9ULT6 936 aa28.12■■■□□ 2.09
SEC22C-213ENST00000456222 WWC1Q8IX03 1113 aa28.11■■■□□ 2.09
SEC22C-213ENST00000456222 JARID2Q92833 1246 aaPredicted RBP28.11■■■□□ 2.09
SEC22C-213ENST00000456222 LMOD1P29536 600 aaPredicted RBP28.1■■■□□ 2.09
SEC22C-213ENST00000456222 HSPA1AP0DMV8 641 aaKnown RBP28.09■■■□□ 2.09
SEC22C-213ENST00000456222 HSPA1BP0DMV9 641 aaKnown RBP28.09■■■□□ 2.09
SEC22C-213ENST00000456222 FMR1Q06787 632 aaKnown RBP eCLIP28.09■■■□□ 2.09
SEC22C-213ENST00000456222 CCDC27Q2M243 656 aa28.09■■■□□ 2.09
SEC22C-213ENST00000456222 COL13A1Q5TAT6 717 aaPredicted RBP28.09■■■□□ 2.09
SEC22C-213ENST00000456222 CCDC30Q5VVM6 783 aa28.09■■■□□ 2.09
SEC22C-213ENST00000456222 ZBTB38Q8NAP3 1195 aaPredicted RBP28.09■■■□□ 2.09
SEC22C-213ENST00000456222 YDJCA8MPS7 323 aa28.08■■■□□ 2.09
SEC22C-213ENST00000456222 ZEB1P37275 1124 aaPredicted RBP28.08■■■□□ 2.09
SEC22C-213ENST00000456222 MRS2Q9HD23 443 aa28.08■■■□□ 2.09
SEC22C-213ENST00000456222 CNTNAP1P78357 1384 aa28.08■■■□□ 2.09
SEC22C-213ENST00000456222 TMEM88BA6NKF7 163 aa28.07■■■□□ 2.08
SEC22C-213ENST00000456222 RAD17O75943 681 aa28.07■■■□□ 2.08
SEC22C-213ENST00000456222 GMPSP49915 693 aaPredicted RBP28.07■■■□□ 2.08
SEC22C-213ENST00000456222 TMC4Q7Z404 712 aa28.07■■■□□ 2.08
SEC22C-213ENST00000456222 SEC31BQ9NQW1 1179 aa28.07■■■□□ 2.08
SEC22C-213ENST00000456222 GPRC5DQ9NZD1 345 aa28.07■■■□□ 2.08
SEC22C-213ENST00000456222 ZNF316A6NFI3 1004 aaPredicted RBP28.06■■■□□ 2.08
SEC22C-213ENST00000456222 GPSM2P81274 684 aa28.06■■■□□ 2.08
SEC22C-213ENST00000456222 METTL22Q9BUU2 404 aaPredicted RBP28.06■■■□□ 2.08
SEC22C-213ENST00000456222 CCDC191Q8NCU4 936 aa28.05■■■□□ 2.08
SEC22C-213ENST00000456222 POLLQ9UGP5 575 aa28.05■■■□□ 2.08
SEC22C-213ENST00000456222 NSFL1CQ9UNZ2 370 aaKnown RBP28.05■■■□□ 2.08
SEC22C-213ENST00000456222 MAP3K2Q9Y2U5 619 aa28.05■■■□□ 2.08
SEC22C-213ENST00000456222 PCCAP05165 728 aaPredicted RBP28.04■■■□□ 2.08
SEC22C-213ENST00000456222 CIAPIN1Q6FI81 312 aa28.04■■■□□ 2.08
SEC22C-213ENST00000456222 G2E3Q7L622 706 aa28.04■■■□□ 2.08
SEC22C-213ENST00000456222 GPR101Q96P66 508 aaPredicted RBP28.04■■■□□ 2.08
SEC22C-213ENST00000456222 CWC25Q9NXE8 425 aaPredicted RBP28.04■■■□□ 2.08
SEC22C-213ENST00000456222 SHTN1A0MZ66 631 aa28.03■■■□□ 2.08
SEC22C-213ENST00000456222 RPS8P62241 208 aaKnown RBP28.03■■■□□ 2.08
SEC22C-213ENST00000456222 USP50Q70EL3 339 aaPredicted RBP28.03■■■□□ 2.08
SEC22C-213ENST00000456222 PI4KAP2A4QPH2 592 aa28.02■■■□□ 2.08
SEC22C-213ENST00000456222 IGKV5-2P06315 115 aa28.02■■■□□ 2.08
SEC22C-213ENST00000456222 PI4KAP1Q8N8J0 262 aa28.02■■■□□ 2.08
SEC22C-213ENST00000456222 CCDC85AQ96PX6 553 aaPredicted RBP28.02■■■□□ 2.08
SEC22C-213ENST00000456222 ADARB2Q9NS39 739 aaKnown RBP28.02■■■□□ 2.08
SEC22C-213ENST00000456222 TRAF5O00463 557 aa28.01■■■□□ 2.07
SEC22C-213ENST00000456222 RIMBP2O15034 1052 aa28.01■■■□□ 2.07
SEC22C-213ENST00000456222 DDX58O95786 925 aaKnown RBP28.01■■■□□ 2.07
SEC22C-213ENST00000456222 VEGFBP49765 207 aa28.01■■■□□ 2.07
SEC22C-213ENST00000456222 TWISTNBQ3B726 338 aaPredicted RBP28.01■■■□□ 2.07
SEC22C-213ENST00000456222 DBNDD1Q9H9R9 158 aa28.01■■■□□ 2.07
SEC22C-213ENST00000456222 SALL2Q9Y467 1007 aaPredicted RBP28.01■■■□□ 2.07
SEC22C-213ENST00000456222 TRPM7Q96QT4 1865 aa28.01■■■□□ 2.07
SEC22C-213ENST00000456222 C6orf229H3BNL8 230 aa28■■■□□ 2.07
SEC22C-213ENST00000456222 ANP32CO43423 234 aa28■■■□□ 2.07
SEC22C-213ENST00000456222 WASHC4Q2M389 1173 aa28■■■□□ 2.07
SEC22C-213ENST00000456222 KSR2Q6VAB6 950 aa28■■■□□ 2.07
SEC22C-213ENST00000456222 SCN9AQ15858 1988 aa28■■■□□ 2.07
SEC22C-213ENST00000456222 IL16Q14005 1332 aa27.99■■■□□ 2.07
SEC22C-213ENST00000456222 KCNQ5Q9NR82 932 aa27.99■■■□□ 2.07
SEC22C-213ENST00000456222 FANCIQ9NVI1 1328 aa27.98■■■□□ 2.07
SEC22C-213ENST00000456222 PDE8AO60658 829 aa27.98■■■□□ 2.07
SEC22C-213ENST00000456222 HIRAP54198 1017 aaPredicted RBP27.98■■■□□ 2.07
SEC22C-213ENST00000456222 TBC1D16Q8TBP0 767 aa27.98■■■□□ 2.07
SEC22C-213ENST00000456222 ZBTB12Q9Y330 459 aaPredicted RBP27.98■■■□□ 2.07
SEC22C-213ENST00000456222 MYH3P11055 1940 aa27.97■■■□□ 2.07
SEC22C-213ENST00000456222 TNIP1Q15025 636 aa27.97■■■□□ 2.07
SEC22C-213ENST00000456222 DOK7Q18PE1 504 aa27.97■■■□□ 2.07
SEC22C-213ENST00000456222 CWF19L2Q2TBE0 894 aaKnown RBP27.97■■■□□ 2.07
SEC22C-213ENST00000456222 TRPM4Q8TD43 1214 aa27.97■■■□□ 2.07
SEC22C-213ENST00000456222 BCL2L13Q9BXK5 485 aa27.97■■■□□ 2.07
SEC22C-213ENST00000456222 STK31Q9BXU1 1019 aa27.97■■■□□ 2.07
SEC22C-213ENST00000456222 RASSF10A6NK89 507 aa27.96■■■□□ 2.07
SEC22C-213ENST00000456222 CCDC152Q4G0S7 254 aa27.96■■■□□ 2.07
SEC22C-213ENST00000456222 CHMP4AQ9BY43 222 aa27.96■■■□□ 2.07
SEC22C-213ENST00000456222 SPEF2Q9C093 1822 aa27.96■■■□□ 2.07
SEC22C-213ENST00000456222 PSMD14O00487 310 aa27.95■■■□□ 2.06
SEC22C-213ENST00000456222 SLC4A2P04920 1241 aa27.95■■■□□ 2.06
SEC22C-213ENST00000456222 NCBP3Q53F19 620 aaKnown RBP27.95■■■□□ 2.06
SEC22C-213ENST00000456222 CST9Q5W186 159 aa27.95■■■□□ 2.06
SEC22C-213ENST00000456222 RTL9Q8NET4 1388 aa27.95■■■□□ 2.06
SEC22C-213ENST00000456222 CDHR2Q9BYE9 1310 aa27.94■■■□□ 2.06
SEC22C-213ENST00000456222 ECE2O60344 883 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms