RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 ZNRF3Q9ULT6 936 aa24.41■■□□□ 1.5
COL20A1-204ENST00000455906 DUOX1Q9NRD9 1551 aa24.41■■□□□ 1.5
COL20A1-204ENST00000455906 FOXN1O15353 648 aa24.4■■□□□ 1.5
COL20A1-204ENST00000455906 CXCL9Q07325 125 aa24.4■■□□□ 1.5
COL20A1-204ENST00000455906 ANKRD13DQ6ZTN6 518 aa24.4■■□□□ 1.5
COL20A1-204ENST00000455906 USP50Q70EL3 339 aaPredicted RBP24.4■■□□□ 1.5
COL20A1-204ENST00000455906 MPNDQ8N594 471 aa24.4■■□□□ 1.5
COL20A1-204ENST00000455906 KIAA2012Q0VF49 1180 aa24.39■■□□□ 1.49
COL20A1-204ENST00000455906 DUSP27Q5VZP5 1158 aa24.39■■□□□ 1.49
COL20A1-204ENST00000455906 MBIPQ9NS73 344 aa24.39■■□□□ 1.49
COL20A1-204ENST00000455906 GPRC5DQ9NZD1 345 aa24.39■■□□□ 1.49
COL20A1-204ENST00000455906 ZNF853P0CG23 659 aa24.38■■□□□ 1.49
COL20A1-204ENST00000455906 FMR1Q06787 632 aaKnown RBP eCLIP24.38■■□□□ 1.49
COL20A1-204ENST00000455906 TRPM7Q96QT4 1865 aa24.38■■□□□ 1.49
COL20A1-204ENST00000455906 COL4A1P02462 1669 aa24.37■■□□□ 1.49
COL20A1-204ENST00000455906 ATP5J2-PTCD1G3V325 749 aa24.37■■□□□ 1.49
COL20A1-204ENST00000455906 CAPN15O75808 1086 aa24.37■■□□□ 1.49
COL20A1-204ENST00000455906 DEFB115Q30KQ5 88 aa24.37■■□□□ 1.49
COL20A1-204ENST00000455906 FAM89AQ96GI7 184 aa24.37■■□□□ 1.49
COL20A1-204ENST00000455906 HYPKQ9NX55 129 aa24.37■■□□□ 1.49
COL20A1-204ENST00000455906 ADARB2Q9NS39 739 aaKnown RBP24.36■■□□□ 1.49
COL20A1-204ENST00000455906 GMPSP49915 693 aaPredicted RBP24.35■■□□□ 1.49
COL20A1-204ENST00000455906 SF3B3Q15393 1217 aaKnown RBP24.35■■□□□ 1.49
COL20A1-204ENST00000455906 TMC4Q7Z404 712 aa24.35■■□□□ 1.49
COL20A1-204ENST00000455906 WBP1LQ9NX94 342 aa24.35■■□□□ 1.49
COL20A1-204ENST00000455906 TRAF5O00463 557 aa24.34■■□□□ 1.49
COL20A1-204ENST00000455906 APAF1O14727 1248 aa24.34■■□□□ 1.49
COL20A1-204ENST00000455906 TRIM28Q13263 835 aaKnown RBP24.34■■□□□ 1.49
COL20A1-204ENST00000455906 CIAPIN1Q6FI81 312 aa24.34■■□□□ 1.49
COL20A1-204ENST00000455906 CELF1Q92879 486 aaKnown RBP24.34■■□□□ 1.49
COL20A1-204ENST00000455906 ABT1Q9ULW3 272 aaKnown RBP24.34■■□□□ 1.49
COL20A1-204ENST00000455906 YDJCA8MPS7 323 aa24.33■■□□□ 1.49
COL20A1-204ENST00000455906 RAD17O75943 681 aa24.33■■□□□ 1.49
COL20A1-204ENST00000455906 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
COL20A1-204ENST00000455906 CDHR2Q9BYE9 1310 aa24.33■■□□□ 1.48
COL20A1-204ENST00000455906 WDR33Q9C0J8 1336 aaKnown RBP24.33■■□□□ 1.48
COL20A1-204ENST00000455906 THSD7BQ9C0I4 1608 aa24.32■■□□□ 1.48
COL20A1-204ENST00000455906 CST9Q5W186 159 aa24.32■■□□□ 1.48
COL20A1-204ENST00000455906 AIDAQ96BJ3 306 aa24.32■■□□□ 1.48
COL20A1-204ENST00000455906 PRDM10Q9NQV6 1147 aa24.32■■□□□ 1.48
COL20A1-204ENST00000455906 CTCFP49711 727 aaPredicted RBP24.31■■□□□ 1.48
COL20A1-204ENST00000455906 RTL5Q5HYW3 569 aaPredicted RBP24.31■■□□□ 1.48
COL20A1-204ENST00000455906 TNIP1Q15025 636 aa24.3■■□□□ 1.48
COL20A1-204ENST00000455906 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
COL20A1-204ENST00000455906 IRS4O14654 1257 aaPredicted RBP24.29■■□□□ 1.48
COL20A1-204ENST00000455906 HIRAP54198 1017 aaPredicted RBP24.29■■□□□ 1.48
COL20A1-204ENST00000455906 GNAI1P63096 354 aa24.29■■□□□ 1.48
COL20A1-204ENST00000455906 PGAP2Q9UHJ9 254 aa24.29■■□□□ 1.48
COL20A1-204ENST00000455906 ELL2O00472 640 aaPredicted RBP24.28■■□□□ 1.48
COL20A1-204ENST00000455906 RIC3Q7Z5B4 369 aa24.28■■□□□ 1.48
COL20A1-204ENST00000455906 BCL2L13Q9BXK5 485 aa24.28■■□□□ 1.48
COL20A1-204ENST00000455906 NSFL1CQ9UNZ2 370 aaKnown RBP24.28■■□□□ 1.48
COL20A1-204ENST00000455906 SHTN1A0MZ66 631 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 GPSM2P81274 684 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 CALD1Q05682 793 aaKnown RBP24.27■■□□□ 1.48
COL20A1-204ENST00000455906 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 C8orf58Q8NAV2 365 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 TRPM4Q8TD43 1214 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 POLLQ9UGP5 575 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 TLL2Q9Y6L7 1015 aa24.27■■□□□ 1.48
COL20A1-204ENST00000455906 WASHC4Q2M389 1173 aa24.26■■□□□ 1.47
COL20A1-204ENST00000455906 ZBTB38Q8NAP3 1195 aaPredicted RBP24.26■■□□□ 1.47
COL20A1-204ENST00000455906 CAPNS2Q96L46 248 aa24.26■■□□□ 1.47
COL20A1-204ENST00000455906 GLIS2Q9BZE0 524 aaPredicted RBP24.26■■□□□ 1.47
COL20A1-204ENST00000455906 CNOT7Q9UIV1 285 aaKnown RBP24.26■■□□□ 1.47
COL20A1-204ENST00000455906 LBX1P52954 281 aa24.25■■□□□ 1.47
COL20A1-204ENST00000455906 MAP2K1Q02750 393 aaPredicted RBP24.25■■□□□ 1.47
COL20A1-204ENST00000455906 CYP4F22Q6NT55 531 aa24.25■■□□□ 1.47
COL20A1-204ENST00000455906 ZC3H15Q8WU90 426 aaKnown RBP24.25■■□□□ 1.47
COL20A1-204ENST00000455906 HSPA8P11142 646 aaKnown RBP24.24■■□□□ 1.47
COL20A1-204ENST00000455906 RPS8P62241 208 aaKnown RBP24.24■■□□□ 1.47
COL20A1-204ENST00000455906 MYD88Q99836 296 aa24.24■■□□□ 1.47
COL20A1-204ENST00000455906 DBNDD1Q9H9R9 158 aa24.24■■□□□ 1.47
COL20A1-204ENST00000455906 ZBTB12Q9Y330 459 aaPredicted RBP24.24■■□□□ 1.47
COL20A1-204ENST00000455906 C6orf229H3BNL8 230 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 PSMD14O00487 310 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 RIMBP2O15034 1052 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 ECE1P42892 770 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 PAXIP1Q6ZW49 1069 aaPredicted RBP24.23■■□□□ 1.47
COL20A1-204ENST00000455906 MICALL2Q8IY33 904 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 DPF2Q92785 391 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 SEC31BQ9NQW1 1179 aa24.23■■□□□ 1.47
COL20A1-204ENST00000455906 SCN9AQ15858 1988 aa24.22■■□□□ 1.47
COL20A1-204ENST00000455906 CELF2O95319 508 aaKnown RBP24.22■■□□□ 1.47
COL20A1-204ENST00000455906 SAPCD2Q86UD0 394 aa24.22■■□□□ 1.47
COL20A1-204ENST00000455906 CCDC191Q8NCU4 936 aa24.22■■□□□ 1.47
COL20A1-204ENST00000455906 TBC1D16Q8TBP0 767 aa24.22■■□□□ 1.47
COL20A1-204ENST00000455906 GPR101Q96P66 508 aaPredicted RBP24.22■■□□□ 1.47
COL20A1-204ENST00000455906 RTL9Q8NET4 1388 aa24.21■■□□□ 1.47
COL20A1-204ENST00000455906 H7C1D1 291 aa24.21■■□□□ 1.47
COL20A1-204ENST00000455906 PCCAP05165 728 aaPredicted RBP24.21■■□□□ 1.47
COL20A1-204ENST00000455906 KCNQ5Q9NR82 932 aa24.21■■□□□ 1.47
COL20A1-204ENST00000455906 ECE2O60344 883 aa24.2■■□□□ 1.46
COL20A1-204ENST00000455906 GRM1Q13255 1194 aa24.2■■□□□ 1.46
COL20A1-204ENST00000455906 DOK7Q18PE1 504 aa24.2■■□□□ 1.46
COL20A1-204ENST00000455906 TSPYL6Q8N831 410 aa24.2■■□□□ 1.46
COL20A1-204ENST00000455906 EYA3Q99504 573 aa24.2■■□□□ 1.46
COL20A1-204ENST00000455906 METTL22Q9BUU2 404 aaPredicted RBP24.2■■□□□ 1.46
COL20A1-204ENST00000455906 PODXL2Q9NZ53 605 aa24.2■■□□□ 1.46
COL20A1-204ENST00000455906 CCDC30Q5VVM6 783 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms