RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
HMGXB4-204ENST00000455359 NLGN2Q8NFZ4 835 aa17.95■□□□□ 0.46
HMGXB4-204ENST00000455359 SUCLG2Q96I99 432 aa17.95■□□□□ 0.46
HMGXB4-204ENST00000455359 MEIS3Q99687 375 aa17.95■□□□□ 0.46
HMGXB4-204ENST00000455359 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
HMGXB4-204ENST00000455359 AFDNP55196 1824 aaKnown RBP17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 BBOX1O75936 387 aa17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 GNAI2P04899 355 aa17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 TTLL6Q8N841 843 aa17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.467e-7■□□□□ 9.9
HMGXB4-204ENST00000455359 KAZALD1Q96I82 304 aa17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
HMGXB4-204ENST00000455359 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
HMGXB4-204ENST00000455359 DALRD3Q5D0E6 543 aaKnown RBP17.93■□□□□ 0.46
HMGXB4-204ENST00000455359 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
HMGXB4-204ENST00000455359 GRAPQ13588 217 aa17.92■□□□□ 0.46
HMGXB4-204ENST00000455359 AAMPQ13685 434 aa17.92■□□□□ 0.46
HMGXB4-204ENST00000455359 LMBR1LQ6UX01 489 aa17.92■□□□□ 0.46
HMGXB4-204ENST00000455359 GRAPLQ8TC17 118 aaPredicted RBP17.92■□□□□ 0.46
HMGXB4-204ENST00000455359 CDC5LQ99459 802 aaKnown RBP17.92■□□□□ 0.46
HMGXB4-204ENST00000455359 BICC1Q9H694 974 aaKnown RBP17.92■□□□□ 0.46
HMGXB4-204ENST00000455359 EPHA10Q5JZY3 1008 aa17.91■□□□□ 0.46
HMGXB4-204ENST00000455359 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
HMGXB4-204ENST00000455359 RPS8P62241 208 aaKnown RBP17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 MTX1Q13505 466 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 CCDC57Q2TAC2 916 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 SOGA3Q5TF21 947 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 CC2D2BQ6DHV5 1058 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 GREM2Q9H772 168 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 ZBTB40Q9NUA8 1239 aa17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
HMGXB4-204ENST00000455359 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
HMGXB4-204ENST00000455359 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
HMGXB4-204ENST00000455359 ITGA6P23229 1130 aa17.88■□□□□ 0.45
HMGXB4-204ENST00000455359 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
HMGXB4-204ENST00000455359 ANKRD18AQ8IVF6 992 aa17.88■□□□□ 0.45
HMGXB4-204ENST00000455359 C7orf43Q8WVR3 580 aa17.88■□□□□ 0.45
HMGXB4-204ENST00000455359 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
HMGXB4-204ENST00000455359 ANKRD31Q8N7Z5 1873 aa17.87■□□□□ 0.45
HMGXB4-204ENST00000455359 BCS1LQ9Y276 419 aa17.87■□□□□ 0.45
HMGXB4-204ENST00000455359 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
HMGXB4-204ENST00000455359 TNRC6CQ9HCJ0 1690 aaKnown RBP17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 PPEF1O14829 653 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 GRIN3BO60391 1043 aa17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 IGHMBP2P38935 993 aaKnown RBP17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 SP8Q8IXZ3 490 aa17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 CELF1Q92879 486 aaKnown RBP17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 SEC31BQ9NQW1 1179 aa17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 BSDC1Q9NW68 430 aaPredicted RBP17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 ATP6V0A2Q9Y487 856 aa17.86■□□□□ 0.45
HMGXB4-204ENST00000455359 LAMB2P55268 1798 aa17.85■□□□□ 0.45
HMGXB4-204ENST00000455359 ATP8B2P98198 1209 aa17.85■□□□□ 0.45
HMGXB4-204ENST00000455359 TAF7LQ5H9L4 462 aa17.85■□□□□ 0.45
HMGXB4-204ENST00000455359 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
HMGXB4-204ENST00000455359 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
HMGXB4-204ENST00000455359 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
HMGXB4-204ENST00000455359 CRBNQ96SW2 442 aa17.84■□□□□ 0.45
HMGXB4-204ENST00000455359 MPHOSPH8Q99549 860 aa17.84■□□□□ 0.45
HMGXB4-204ENST00000455359 KIAA1551Q9HCM1 1747 aa17.84■□□□□ 0.45
HMGXB4-204ENST00000455359 SRGAP3O43295 1099 aa17.83■□□□□ 0.44
HMGXB4-204ENST00000455359 GPR162Q16538 588 aa17.83■□□□□ 0.44
HMGXB4-204ENST00000455359 CCDC93Q567U6 631 aa17.83■□□□□ 0.44
HMGXB4-204ENST00000455359 RTKN2Q8IZC4 609 aa17.83■□□□□ 0.44
HMGXB4-204ENST00000455359 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
HMGXB4-204ENST00000455359 CEP85Q6P2H3 762 aa17.82■□□□□ 0.44
HMGXB4-204ENST00000455359 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
HMGXB4-204ENST00000455359 COPRSQ9NQ92 184 aa17.82■□□□□ 0.44
HMGXB4-204ENST00000455359 C21orf2O43822 256 aa17.81■□□□□ 0.44
HMGXB4-204ENST00000455359 HMMRO75330 724 aa17.81■□□□□ 0.44
HMGXB4-204ENST00000455359 POLA2Q14181 598 aa17.81■□□□□ 0.44
HMGXB4-204ENST00000455359 LDHAL6AQ6ZMR3 332 aa17.81■□□□□ 0.44
HMGXB4-204ENST00000455359 C1orf115Q9H7X2 142 aa17.81■□□□□ 0.44
HMGXB4-204ENST00000455359 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
HMGXB4-204ENST00000455359 CIAO1O76071 339 aa17.8■□□□□ 0.44
HMGXB4-204ENST00000455359 YBX3P16989 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
HMGXB4-204ENST00000455359 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
HMGXB4-204ENST00000455359 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
HMGXB4-204ENST00000455359 DLEC1Q9Y238 1755 aa17.8■□□□□ 0.44
HMGXB4-204ENST00000455359 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
HMGXB4-204ENST00000455359 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
HMGXB4-204ENST00000455359 PSMD1Q99460 953 aa17.79■□□□□ 0.44
HMGXB4-204ENST00000455359 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
HMGXB4-204ENST00000455359 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
HMGXB4-204ENST00000455359 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 EYA2O00167 538 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 SUPT20HQ8NEM7 779 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 CNNM1Q9NRU3 951 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 WWC3Q9ULE0 1092 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 MROH5Q6ZUA9 1318 aa17.78■□□□□ 0.44
HMGXB4-204ENST00000455359 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
HMGXB4-204ENST00000455359 DPP8Q6V1X1 898 aaPredicted RBP17.77■□□□□ 0.44
HMGXB4-204ENST00000455359 MPNDQ8N594 471 aa17.77■□□□□ 0.44
HMGXB4-204ENST00000455359 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms