RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 PPP1R42Q7Z4L9 355 aa24.24■■□□□ 1.47
HIGD1A-204ENST00000452906 COL11A2P13942 1736 aaPredicted RBP24.24■■□□□ 1.47
HIGD1A-204ENST00000452906 CCDC88AQ3V6T2 1871 aa24.24■■□□□ 1.47
HIGD1A-204ENST00000452906 ATP5J2-PTCD1G3V325 749 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 KIF3CO14782 793 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 RAB11FIP3O75154 756 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 CLEC4GQ6UXB4 293 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 C2CD5Q86YS7 1000 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 TTLL6Q8N841 843 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 SETDB2Q96T68 719 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 BRIP1Q9BX63 1249 aa24.23■■□□□ 1.47
HIGD1A-204ENST00000452906 H7C1W4 665 aa24.22■■□□□ 1.47
HIGD1A-204ENST00000452906 PDE6BP35913 854 aa24.22■■□□□ 1.47
HIGD1A-204ENST00000452906 PNMA6EA0A0J9YXQ4 647 aa24.21■■□□□ 1.47
HIGD1A-204ENST00000452906 PRR5LQ6MZQ0 368 aa24.21■■□□□ 1.47
HIGD1A-204ENST00000452906 UBE3BQ7Z3V4 1068 aa24.21■■□□□ 1.47
HIGD1A-204ENST00000452906 SUCLG2Q96I99 432 aa24.21■■□□□ 1.47
HIGD1A-204ENST00000452906 NPHP1O15259 732 aa24.2■■□□□ 1.46
HIGD1A-204ENST00000452906 LNPKQ9C0E8 428 aa24.2■■□□□ 1.46
HIGD1A-204ENST00000452906 RNF181Q9P0P0 153 aa24.2■■□□□ 1.46
HIGD1A-204ENST00000452906 TNRC6CQ9HCJ0 1690 aaKnown RBP24.2■■□□□ 1.46
HIGD1A-204ENST00000452906 ZC3H4Q9UPT8 1303 aaKnown RBP24.19■■□□□ 1.46
HIGD1A-204ENST00000452906 ERC1Q8IUD2 1116 aa24.19■■□□□ 1.46
HIGD1A-204ENST00000452906 CNBD1Q8NA66 436 aa24.19■■□□□ 1.46
HIGD1A-204ENST00000452906 LRRCC1Q9C099 1032 aa24.19■■□□□ 1.46
HIGD1A-204ENST00000452906 CACNA1SQ13698 1873 aa24.18■■□□□ 1.46
HIGD1A-204ENST00000452906 FER1L6Q2WGJ9 1857 aa24.18■■□□□ 1.46
HIGD1A-204ENST00000452906 PCCAP05165 728 aaPredicted RBP24.18■■□□□ 1.46
HIGD1A-204ENST00000452906 BICC1Q9H694 974 aaKnown RBP24.18■■□□□ 1.46
HIGD1A-204ENST00000452906 HSP90B1P14625 803 aaKnown RBP24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 CASP7P55210 303 aa24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 ST5P78524 1137 aa24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 FAM161AQ3B820 660 aa24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 RABL6Q3YEC7 729 aaPredicted RBP24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 NOP58Q9Y2X3 529 aaKnown RBP24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 MYH3P11055 1940 aa24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 DICER1Q9UPY3 1922 aaKnown RBP24.17■■□□□ 1.46
HIGD1A-204ENST00000452906 CDHR2Q9BYE9 1310 aa24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 TIAM2Q8IVF5 1701 aa24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 SURF6O75683 361 aaKnown RBP24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 HSPA6P17066 643 aa24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 PARP10Q53GL7 1025 aa24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 ZBTB38Q8NAP3 1195 aaPredicted RBP24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 TSHZ2Q9NRE2 1034 aa24.16■■□□□ 1.46
HIGD1A-204ENST00000452906 TOMM70O94826 608 aa24.15■■□□□ 1.46
HIGD1A-204ENST00000452906 SKAP1Q86WV1 359 aa24.15■■□□□ 1.46
HIGD1A-204ENST00000452906 KIF1BPQ96EK5 621 aa24.15■■□□□ 1.46
HIGD1A-204ENST00000452906 EXOC6BQ9Y2D4 811 aa24.15■■□□□ 1.46
HIGD1A-204ENST00000452906 CEP350Q5VT06 3117 aa24.15■■□□□ 1.46
HIGD1A-204ENST00000452906 LMNB1P20700 586 aa24.14■■□□□ 1.45
HIGD1A-204ENST00000452906 PDE4AP27815 886 aa24.14■■□□□ 1.45
HIGD1A-204ENST00000452906 NLRP10Q86W26 655 aa24.14■■□□□ 1.45
HIGD1A-204ENST00000452906 ZNF34Q8IZ26 560 aa24.14■■□□□ 1.45
HIGD1A-204ENST00000452906 KAZALD1Q96I82 304 aa24.14■■□□□ 1.45
HIGD1A-204ENST00000452906 NMRK2Q9NPI5 230 aa24.14■■□□□ 1.45
HIGD1A-204ENST00000452906 SLX4Q8IY92 1834 aa24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 RASSF7Q02833 373 aa24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 OS9Q13438 667 aaPredicted RBP24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 HLFQ16534 295 aa24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 NBPF5PQ86XG9 351 aaPredicted RBP24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 ZNF622Q969S3 477 aaKnown RBP eCLIP24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 PLA2G12BQ9BX93 195 aa24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 LAMB2P55268 1798 aa24.13■■□□□ 1.45
HIGD1A-204ENST00000452906 STYK1Q6J9G0 422 aa24.12■■□□□ 1.45
HIGD1A-204ENST00000452906 NIP7Q9Y221 180 aaKnown RBP eCLIP24.12■■□□□ 1.45
HIGD1A-204ENST00000452906 TPTE2Q6XPS3 522 aa24.11■■□□□ 1.45
HIGD1A-204ENST00000452906 CNKSR1Q969H4 720 aa24.11■■□□□ 1.45
HIGD1A-204ENST00000452906 SRGNP10124 158 aa24.1■■□□□ 1.45
HIGD1A-204ENST00000452906 G3BP1Q13283 466 aaKnown RBP eCLIP24.1■■□□□ 1.45
HIGD1A-204ENST00000452906 CCDC24Q8N4L8 307 aa24.1■■□□□ 1.45
HIGD1A-204ENST00000452906 BACH2Q9BYV9 841 aa24.1■■□□□ 1.45
HIGD1A-204ENST00000452906 APBB1O00213 710 aa24.09■■□□□ 1.45
HIGD1A-204ENST00000452906 BMP2KLQ5H9B9 411 aa24.09■■□□□ 1.45
HIGD1A-204ENST00000452906 MASTLQ96GX5 879 aa24.09■■□□□ 1.45
HIGD1A-204ENST00000452906 COPRSQ9NQ92 184 aa24.09■■□□□ 1.45
HIGD1A-204ENST00000452906 TRMT112Q9UI30 125 aaKnown RBP24.09■■□□□ 1.45
HIGD1A-204ENST00000452906 NFKBIEO00221 500 aa24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 EIF5BO60841 1220 aaKnown RBP24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 GPTP24298 496 aa24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 GTF2E1P29083 439 aaPredicted RBP24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 FOXO4P98177 505 aa24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 SOGA3Q5TF21 947 aa24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 C16orf71Q8IYS4 520 aaPredicted RBP24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 RBM46Q8TBY0 533 aaKnown RBP24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 RHPN1Q8TCX5 695 aa24.08■■□□□ 1.45
HIGD1A-204ENST00000452906 AOX1Q06278 1338 aa24.08■■□□□ 1.44
HIGD1A-204ENST00000452906 LTBP3Q9NS15 1303 aa24.08■■□□□ 1.44
HIGD1A-204ENST00000452906 LMBR1LQ6UX01 489 aa24.07■■□□□ 1.44
HIGD1A-204ENST00000452906 UTP14AQ9BVJ6 771 aaKnown RBP24.07■■□□□ 1.44
HIGD1A-204ENST00000452906 NYXQ9GZU5 481 aa24.07■■□□□ 1.44
HIGD1A-204ENST00000452906 C21orf2O43822 256 aa24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 PRELPP51888 382 aa24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 EPHA10Q5JZY3 1008 aa24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 PLEKHM2Q8IWE5 1019 aa24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 CLASRPQ8N2M8 674 aaKnown RBP24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 FBXO3Q9UK99 471 aa24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
HIGD1A-204ENST00000452906 KLRG2A4D1S0 409 aaPredicted RBP24.05■■□□□ 1.44
HIGD1A-204ENST00000452906 PRPF40BQ6NWY9 871 aaKnown RBP24.05■■□□□ 1.44
HIGD1A-204ENST00000452906 OSBPL3Q9H4L5 887 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms