RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 FAM35AQ86V20 835 aa6.02□□□□□ -1.45
HMGB3P22-202ENST00000451823 ANKMY2Q8IV38 441 aa6.02□□□□□ -1.45
HMGB3P22-202ENST00000451823 LENG1Q96BZ8 264 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P22-202ENST00000451823 ANP32EQ9BTT0 268 aa6.02□□□□□ -1.45
HMGB3P22-202ENST00000451823 SUPT16HQ9Y5B9 1047 aaKnown RBP6.02□□□□□ -1.45
HMGB3P22-202ENST00000451823 SMARCA2P51531 1590 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 ABCC8Q09428 1581 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 TGFBR3LH3BV60 316 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 GRNP28799 593 aaKnown RBP6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 IDH3AP50213 366 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 CDCA8Q53HL2 280 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 IER5Q5VY09 327 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 ILDR2Q71H61 639 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 IFT43Q96FT9 208 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 ZFATQ9P243 1243 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP21Q9UK80 565 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 GOLGA3Q08378 1498 aa6.01□□□□□ -1.45
HMGB3P22-202ENST00000451823 SOGA1O94964 1423 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 KIF21BO75037 1637 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 SCO2A0A1W2PP80 73 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 MICAL2O94851 1124 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 NRG1Q02297 640 aaPredicted RBP6□□□□□ -1.45
HMGB3P22-202ENST00000451823 MLLT1Q03111 559 aaPredicted RBP6□□□□□ -1.45
HMGB3P22-202ENST00000451823 DGKZQ13574 1117 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 MBTPS1Q14703 1052 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 C11orf91Q3C1V1 193 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 MSL1Q68DK7 614 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 HFE2Q6ZVN8 426 aa6□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L15C9J2P7 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L10C9JJH3 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L13C9JLJ4 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L12C9JPN9 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L11C9JVI0 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L21D6R901 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L18D6R9N7 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L22D6RA61 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L17D6RBQ6 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L19D6RCP7 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L20D6RJB6 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 OPLAHO14841 1288 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 EPB42P16452 691 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 PLAURQ03405 335 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP17L24Q0WX57 530 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 PCSK7Q16549 785 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 TXNRD3Q86VQ6 643 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 FMR1NBQ8N0W7 255 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 TP53INP1Q96A56 240 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 VTI1AQ96AJ9 217 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 NAGPAQ9UK23 515 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 USP20Q9Y2K6 914 aa5.99□□□□□ -1.45
HMGB3P22-202ENST00000451823 FAM196BA6NMK8 535 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 WEE1P30291 646 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 GRIK5Q16478 980 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 TMEM132AQ24JP5 1023 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 PERM1Q5SV97 790 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 ELMSAN1Q6PJG2 1045 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 DHX32Q7L7V1 743 aaKnown RBP5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 CMTR1Q8N1G2 835 aaKnown RBP5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 FAM200AQ8TCP9 573 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 YTHDC1Q96MU7 727 aaKnown RBP5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 PSMG3-AS1Q96PY0 264 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 ARXQ96QS3 562 aa5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 ZNF777Q9ULD5 760 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P22-202ENST00000451823 A6NJR5 290 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 MAP3K6O95382 1288 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 H2AFB1P0C5Y9 115 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 H2AFB2P0C5Z0 115 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 RARAP10276 462 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 RFX1P22670 979 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 IREB2P48200 963 aaKnown RBP5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 ARSDP51689 593 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 ARTNQ5T4W7 220 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 FBXO11Q86XK2 927 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 TRPM4Q8TD43 1214 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 LPIN3Q9BQK8 851 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 KRTAP4-8Q9BYQ9 185 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 BCL11AQ9H165 835 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 QTRT2Q9H974 415 aaKnown RBP5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 ZFP64Q9NPA5 681 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 LRFN2Q9ULH4 789 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 RUSC2Q8N2Y8 1516 aa5.97□□□□□ -1.45
HMGB3P22-202ENST00000451823 CUX2O14529 1486 aa5.96□□□□□ -1.45
HMGB3P22-202ENST00000451823 BAZ1BQ9UIG0 1483 aaKnown RBP5.96□□□□□ -1.45
HMGB3P22-202ENST00000451823 J3QW42 95 aa5.96□□□□□ -1.46
HMGB3P22-202ENST00000451823 WFDC12Q8WWY7 111 aa5.96□□□□□ -1.46
HMGB3P22-202ENST00000451823 RTCBQ9Y3I0 505 aaKnown RBP5.96□□□□□ -1.46
HMGB3P22-202ENST00000451823 VPS8Q8N3P4 1428 aa5.96□□□□□ -1.46
HMGB3P22-202ENST00000451823 DHX57Q6P158 1386 aaKnown RBP5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 CLIP1P30622 1438 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 WFDC8Q8IUA0 241 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 TTC9Q92623 222 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 SMG9Q9H0W8 520 aaKnown RBP5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 C11orf16Q9NQ32 467 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 FRRS1LQ9P0K9 344 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 SMARCA4P51532 1647 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 CEP164Q9UPV0 1460 aa5.95□□□□□ -1.46
HMGB3P22-202ENST00000451823 LOC102724428A0A0B4J2F2 783 aa5.94□□□□□ -1.46
HMGB3P22-202ENST00000451823 FOXO3O43524 673 aa5.94□□□□□ -1.46
HMGB3P22-202ENST00000451823 SIK1P57059 783 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms