RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.14□□□□□ -0.79
NECAP1-202ENST00000450991 SPEF2Q9C093 1822 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 PTPN12Q05209 780 aaKnown RBP10.14□□□□□ -0.79
NECAP1-202ENST00000450991 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 BCL2L12Q9HB09 334 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 IRS4O14654 1257 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-202ENST00000450991 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-202ENST00000450991 G3BP1Q13283 466 aaKnown RBP eCLIP10.13□□□□□ -0.79
NECAP1-202ENST00000450991 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 ZNF594Q96JF6 807 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-202ENST00000450991 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 COL24A1Q17RW2 1714 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 ZPR1O75312 459 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 SLC27A3Q5K4L6 730 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 TBC1D9BQ66K14 1250 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 PLA2G12BQ9BX93 195 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
NECAP1-202ENST00000450991 CDHR2Q9BYE9 1310 aa10.12□□□□□ -0.79
NECAP1-202ENST00000450991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
NECAP1-202ENST00000450991 RFC4P35249 363 aa10.12□□□□□ -0.79
NECAP1-202ENST00000450991 CLASRPQ8N2M8 674 aaKnown RBP10.12□□□□□ -0.79
NECAP1-202ENST00000450991 UTP14AQ9BVJ6 771 aaKnown RBP10.12□□□□□ -0.79
NECAP1-202ENST00000450991 NARFQ9UHQ1 456 aa10.12□□□□□ -0.79
NECAP1-202ENST00000450991 TTC41PQ6P2S7 1318 aa10.12□□□□□ -0.79
NECAP1-202ENST00000450991 RBM25P49756 843 aaKnown RBP10.12□□□□□ -0.79
NECAP1-202ENST00000450991 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
NECAP1-202ENST00000450991 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 NTSR2O95665 410 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 CCDC24Q8N4L8 307 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 GREM2Q9H772 168 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 A0A1B0GUL6 1792 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 SH3TC1Q8TE82 1336 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 LRP5O75197 1615 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 CTSWP56202 376 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 TAF7LQ5H9L4 462 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
NECAP1-202ENST00000450991 EAF2Q96CJ1 260 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-202ENST00000450991 TFCP2Q12800 502 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 ZNF827Q17R98 1081 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 CCDC57Q2TAC2 916 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 LRRC24Q50LG9 513 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 AACSQ86V21 672 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 TTLL11Q8NHH1 800 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
NECAP1-202ENST00000450991 PUS3Q9BZE2 481 aaKnown RBP10.1□□□□□ -0.79
NECAP1-202ENST00000450991 PLSCR1O15162 318 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 PDE8AO60658 829 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 CSF1RP07333 972 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 ERFEQ4G0M1 354 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 CCDC8Q9H0W5 538 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-202ENST00000450991 TLR7Q9NYK1 1049 aaKnown RBP10.09□□□□□ -0.79
NECAP1-202ENST00000450991 IFIT2P09913 472 aaKnown RBP10.09□□□□□ -0.79
NECAP1-202ENST00000450991 ITGA6P23229 1130 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 CASC1Q6TDU7 716 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 ATG9AQ7Z3C6 839 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 TFCP2L1Q9NZI6 479 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 MYH7P12883 1935 aa10.09□□□□□ -0.79
NECAP1-202ENST00000450991 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 GLRX3O76003 335 aaKnown RBP10.08□□□□□ -0.8
NECAP1-202ENST00000450991 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-202ENST00000450991 IFIT5Q13325 482 aaKnown RBP10.08□□□□□ -0.8
NECAP1-202ENST00000450991 C3orf67Q6ZVT6 689 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 ERC2O15083 957 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-202ENST00000450991 CHMLP26374 656 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 GTF2E1P29083 439 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-202ENST00000450991 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-202ENST00000450991 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 GPATCH3Q96I76 525 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 ZNF609O15014 1411 aa10.08□□□□□ -0.8
NECAP1-202ENST00000450991 EYA2O00167 538 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 CIAO1O76071 339 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 EZH2Q15910 746 aaKnown RBP10.07□□□□□ -0.8
NECAP1-202ENST00000450991 TNNI3KQ59H18 835 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 NBPF5PQ86XG9 351 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-202ENST00000450991 KIF2CQ99661 725 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 USP26Q9BXU7 913 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 FPGT-TNNI3KV9GXZ4 949 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 ABCC12Q96J65 1359 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 TAF1P21675 1872 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 NPHP1O15259 732 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 ADRA2BP18089 450 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 SSFA2P28290 1259 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 NFIXQ14938 502 aa10.07□□□□□ -0.8
NECAP1-202ENST00000450991 AKAP11Q9UKA4 1901 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 ANKRD18BA2A2Z9 1011 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 RGL2O15211 777 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 GYS1P13807 737 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
NECAP1-202ENST00000450991 IL15P40933 162 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-202ENST00000450991 CNTROBQ8N137 903 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 GPR108Q9NPR9 543 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
NECAP1-202ENST00000450991 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms