RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
TOM1-211ENST00000449508 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
TOM1-211ENST00000449508 DDX60Q8IY21 1712 aaKnown RBP17.71■□□□□ 0.43
TOM1-211ENST00000449508 ITGBL1O95965 494 aaPredicted RBP17.7■□□□□ 0.42
TOM1-211ENST00000449508 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
TOM1-211ENST00000449508 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
TOM1-211ENST00000449508 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
TOM1-211ENST00000449508 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
TOM1-211ENST00000449508 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
TOM1-211ENST00000449508 EPS15P42566 896 aa17.69■□□□□ 0.42
TOM1-211ENST00000449508 MAP1SQ66K74 1059 aaPredicted RBP17.69■□□□□ 0.42
TOM1-211ENST00000449508 CNTROBQ8N137 903 aa17.69■□□□□ 0.42
TOM1-211ENST00000449508 MYD88Q99836 296 aa17.69■□□□□ 0.42
TOM1-211ENST00000449508 ZNRF3Q9ULT6 936 aa17.69■□□□□ 0.42
TOM1-211ENST00000449508 ZNF316A6NFI3 1004 aaPredicted RBP17.68■□□□□ 0.42
TOM1-211ENST00000449508 SCNN1DP51172 638 aa17.68■□□□□ 0.42
TOM1-211ENST00000449508 CXCL9Q07325 125 aa17.68■□□□□ 0.42
TOM1-211ENST00000449508 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
TOM1-211ENST00000449508 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
TOM1-211ENST00000449508 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
TOM1-211ENST00000449508 MKRN1Q9UHC7 482 aaKnown RBP17.68■□□□□ 0.42
TOM1-211ENST00000449508 ADAMTSL1Q8N6G6 1762 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 TMEM88BA6NKF7 163 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 ANP32CO43423 234 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
TOM1-211ENST00000449508 KIAA2012Q0VF49 1180 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
TOM1-211ENST00000449508 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 PCNTO95613 3336 aa17.67■□□□□ 0.42
TOM1-211ENST00000449508 HSP90B1P14625 803 aaKnown RBP17.66■□□□□ 0.42
TOM1-211ENST00000449508 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
TOM1-211ENST00000449508 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
TOM1-211ENST00000449508 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
TOM1-211ENST00000449508 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
TOM1-211ENST00000449508 USP50Q70EL3 339 aaPredicted RBP17.65■□□□□ 0.42
TOM1-211ENST00000449508 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
TOM1-211ENST00000449508 RAD17O75943 681 aa17.64■□□□□ 0.41
TOM1-211ENST00000449508 HSPA1AP0DMV8 641 aaKnown RBP17.64■□□□□ 0.41
TOM1-211ENST00000449508 HSPA1BP0DMV9 641 aaKnown RBP17.64■□□□□ 0.41
TOM1-211ENST00000449508 RPS8P62241 208 aaKnown RBP17.64■□□□□ 0.41
TOM1-211ENST00000449508 TNIP1Q15025 636 aa17.64■□□□□ 0.41
TOM1-211ENST00000449508 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
TOM1-211ENST00000449508 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
TOM1-211ENST00000449508 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
TOM1-211ENST00000449508 CWC25Q9NXE8 425 aaPredicted RBP17.64■□□□□ 0.41
TOM1-211ENST00000449508 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
TOM1-211ENST00000449508 MAP3K2Q9Y2U5 619 aa17.64■□□□□ 0.41
TOM1-211ENST00000449508 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
TOM1-211ENST00000449508 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
TOM1-211ENST00000449508 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
TOM1-211ENST00000449508 KSR2Q6VAB6 950 aa17.63■□□□□ 0.41
TOM1-211ENST00000449508 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
TOM1-211ENST00000449508 ADARB2Q9NS39 739 aaKnown RBP17.63■□□□□ 0.41
TOM1-211ENST00000449508 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 PDE8AO60658 829 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 GMPSP49915 693 aaPredicted RBP17.62■□□□□ 0.41
TOM1-211ENST00000449508 GPSM2P81274 684 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
TOM1-211ENST00000449508 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
TOM1-211ENST00000449508 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
TOM1-211ENST00000449508 CCDC152Q4G0S7 254 aa17.61■□□□□ 0.41
TOM1-211ENST00000449508 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
TOM1-211ENST00000449508 POLLQ9UGP5 575 aa17.61■□□□□ 0.41
TOM1-211ENST00000449508 IL16Q14005 1332 aa17.61■□□□□ 0.41
TOM1-211ENST00000449508 YDJCA8MPS7 323 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 DEFB115Q30KQ5 88 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
TOM1-211ENST00000449508 EYA3Q99504 573 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 DUOX1Q9NRD9 1551 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 COL4A1P02462 1669 aa17.6■□□□□ 0.41
TOM1-211ENST00000449508 VEGFBP49765 207 aa17.59■□□□□ 0.41
TOM1-211ENST00000449508 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
TOM1-211ENST00000449508 G2E3Q7L622 706 aa17.59■□□□□ 0.41
TOM1-211ENST00000449508 TBC1D16Q8TBP0 767 aa17.59■□□□□ 0.41
TOM1-211ENST00000449508 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
TOM1-211ENST00000449508 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
TOM1-211ENST00000449508 CDHR2Q9BYE9 1310 aa17.58■□□□□ 0.4
TOM1-211ENST00000449508 IGKV5-2P06315 115 aa17.58■□□□□ 0.4
TOM1-211ENST00000449508 DOK7Q18PE1 504 aa17.58■□□□□ 0.4
TOM1-211ENST00000449508 ZC3H12CQ9C0D7 883 aaKnown RBP17.58■□□□□ 0.4
TOM1-211ENST00000449508 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
TOM1-211ENST00000449508 ABT1Q9ULW3 272 aaKnown RBP17.58■□□□□ 0.4
TOM1-211ENST00000449508 H7C1D1 291 aa17.57■□□□□ 0.4
TOM1-211ENST00000449508 TRAF5O00463 557 aa17.57■□□□□ 0.4
TOM1-211ENST00000449508 PSMD14O00487 310 aa17.57■□□□□ 0.4
TOM1-211ENST00000449508 CWF19L2Q2TBE0 894 aaKnown RBP17.57■□□□□ 0.4
TOM1-211ENST00000449508 WDR63Q8IWG1 891 aa17.57■□□□□ 0.4
TOM1-211ENST00000449508 GPR101Q96P66 508 aaPredicted RBP17.57■□□□□ 0.4
TOM1-211ENST00000449508 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
TOM1-211ENST00000449508 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
TOM1-211ENST00000449508 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
TOM1-211ENST00000449508 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms