RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 RGPD2P0DJD1 1756 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 CRB1P82279 1406 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 STRCQ7RTU9 1775 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 RPAP1Q9BWH6 1393 aaPredicted RBP8.8□□□□□ -1
TRIM49C-201ENST00000448984 TRPM3Q9HCF6 1732 aaPredicted RBP8.8□□□□□ -1
TRIM49C-201ENST00000448984 HSPA2P54652 639 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 UBE2HP62256 183 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 PSME1Q06323 249 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 SART3Q15020 963 aaKnown RBP8.8□□□□□ -1
TRIM49C-201ENST00000448984 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
TRIM49C-201ENST00000448984 TMCO3Q6UWJ1 677 aa8.8□□□□□ -1
TRIM49C-201ENST00000448984 C16orf71Q8IYS4 520 aaPredicted RBP8.8□□□□□ -1
TRIM49C-201ENST00000448984 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 GADD45BO75293 160 aaPredicted RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 CDC25BP30305 580 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 SSR1P43307 286 aaKnown RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 PTPN14Q15678 1187 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 LEKR1Q6ZMV7 388 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 CCDC186Q7Z3E2 898 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 NBPF11Q86T75 865 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 JMYQ8N9B5 988 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 SGSM3Q96HU1 749 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 MEIS3Q99687 375 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 L2HGDHQ9H9P8 463 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 NFAT5O94916 1531 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 IRF6O14896 467 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 OAS2P29728 719 aaKnown RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 ST5P78524 1137 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 USP48Q86UV5 1035 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 IL17REQ8NFR9 667 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 RNF217Q8TC41 542 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 OTUD7AQ8TE49 926 aaPredicted RBP8.79□□□□□ -1
TRIM49C-201ENST00000448984 TBC1D22AQ8WUA7 517 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 ZNF428Q96B54 188 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 NBPF4Q96M43 638 aa8.79□□□□□ -1
TRIM49C-201ENST00000448984 ARHGEF10O15013 1369 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 MSH6P52701 1360 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 TUBB4AP04350 444 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 CCDC192P0DO97 292 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 CORO7P57737 925 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
TRIM49C-201ENST00000448984 FAM43BQ6ZT52 329 aaPredicted RBP8.78□□□□□ -1
TRIM49C-201ENST00000448984 EFCAB13Q8IY85 973 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 CHAMP1Q96JM3 812 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
TRIM49C-201ENST00000448984 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.78□□□□□ -1
TRIM49C-201ENST00000448984 RGS12O14924 1447 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 EIF3CLB5ME19 914 aaKnown RBP8.78□□□□□ -1
TRIM49C-201ENST00000448984 TPM1P09493 284 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 USP8P40818 1118 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 ZKSCAN8Q15776 578 aaPredicted RBP8.78□□□□□ -1
TRIM49C-201ENST00000448984 PLA2G4DQ86XP0 818 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 ZNF592Q92610 1267 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 EIF3CQ99613 913 aaKnown RBP8.78□□□□□ -1
TRIM49C-201ENST00000448984 LGR6Q9HBX8 967 aa8.78□□□□□ -1
TRIM49C-201ENST00000448984 KIF1AQ12756 1690 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 POLR3GO15318 223 aaPredicted RBP8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 KCNQ3O43525 872 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 LIG1P18858 919 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 LRMPQ12912 555 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 CASC1Q6TDU7 716 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 REXO1L1PQ8IX06 675 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 ARHGAP45Q92619 1136 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 RGPD5Q99666 1765 aa8.77□□□□□ -1.01
TRIM49C-201ENST00000448984 KLHL33A6NCF5 533 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 TTC36A6NLP5 189 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 ANXA1P04083 346 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 TMX3Q96JJ7 454 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 API5Q9BZZ5 524 aaKnown RBP8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 PHRF1Q9P1Y6 1649 aaKnown RBP8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 GNAT3A8MTJ3 354 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 SGSM2O43147 1006 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 C21orf2O43822 256 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 ZNF75DP51815 510 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 DNAJC21Q5F1R6 531 aaKnown RBP8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 STAG1Q8WVM7 1258 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 FAM107BQ9H098 131 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 KDRP35968 1356 aa8.76□□□□□ -1.01
TRIM49C-201ENST00000448984 KDM4FA0A1W2PPD8 638 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 EIF2S2P20042 333 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 ZC3H6P61129 1189 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 MAP9Q49MG5 647 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 FOXD4L5Q5VV16 416 aaPredicted RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 DRC7Q8IY82 874 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 FOXD4L4Q8WXT5 416 aaPredicted RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 EXOC6BQ9Y2D4 811 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms