RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 AACSQ86V21 672 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 SNX21Q969T3 373 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 LOC102724428A0A0B4J2F2 783 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 SIK1P57059 783 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 FOXO4P98177 505 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
VIPAS39-203ENST00000448935 NUP98P52948 1817 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 MCCP23508 829 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 CHMLP26374 656 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 E2F4Q16254 413 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 ESYT1Q9BSJ8 1104 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 SIL1Q9H173 461 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 CCDC87Q9NVE4 849 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 CDHR2Q9BYE9 1310 aa12.87□□□□□ -0.35
VIPAS39-203ENST00000448935 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
VIPAS39-203ENST00000448935 PSEN1P49768 467 aa12.86□□□□□ -0.35
VIPAS39-203ENST00000448935 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
VIPAS39-203ENST00000448935 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
VIPAS39-203ENST00000448935 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
VIPAS39-203ENST00000448935 HIP1O00291 1037 aa12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 EIF5P55010 431 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 MYT1Q01538 1121 aa12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 RABEP1Q15276 862 aa12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 RUFY2Q8WXA3 655 aa12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-203ENST00000448935 CIAO1O76071 339 aa12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 IL15P40933 162 aaPredicted RBP12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 NLRP10Q86W26 655 aa12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 KLHDC4Q8TBB5 520 aa12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 MYH3P11055 1940 aa12.84□□□□□ -0.35
VIPAS39-203ENST00000448935 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 AK7Q96M32 723 aa12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 KIF2CQ99661 725 aa12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
VIPAS39-203ENST00000448935 EYA2O00167 538 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 SEMA3EO15041 775 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 ANAPC15P60006 121 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 TFCP2Q12800 502 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 HLFQ16534 295 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 RTL5Q5HYW3 569 aaPredicted RBP12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 GJD4Q96KN9 370 aaPredicted RBP12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 DIAPH3Q9NSV4 1193 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 ZNF652Q9Y2D9 606 aa12.82□□□□□ -0.36
VIPAS39-203ENST00000448935 CSF1RP07333 972 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 ATP5JP18859 108 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 TICAM2Q86XR7 235 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 ZNF34Q8IZ26 560 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 SLC24A3Q9HC58 644 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
VIPAS39-203ENST00000448935 ST18O60284 1047 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 PPP1R37O75864 691 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 GPTP24298 496 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 AFF2P51816 1311 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 KIAA1211Q6ZU35 1233 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 BTAF1O14981 1849 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 ATRNO75882 1429 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 RAD50Q92878 1312 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 SGSM2O43147 1006 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 KCNQ2O43526 872 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 PDE8AO60658 829 aa12.8□□□□□ -0.36
VIPAS39-203ENST00000448935 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms