RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L21D6R901 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 KIF3BO15066 747 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 RFX1P22670 979 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 UBAP2LQ14157 1087 aaKnown RBP10.5□□□□□ -0.73
LINC00349-201ENST00000448748 TSPAN10Q9H1Z9 355 aaPredicted RBP10.5□□□□□ -0.73
LINC00349-201ENST00000448748 CRISPLD1Q9H336 500 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 STK17AQ9UEE5 414 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
LINC00349-201ENST00000448748 EFCAB6Q5THR3 1501 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 SEC13P55735 322 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 DPYDQ12882 1025 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 GGT6Q6P531 493 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 C1orf216Q8TAB5 229 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 L3MBTL2Q969R5 705 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
LINC00349-201ENST00000448748 NOS2P35228 1153 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
LINC00349-201ENST00000448748 TEAD4Q15561 434 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 EFHC2Q5JST6 749 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 ZDHHC3Q9NYG2 299 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 ANKRD50Q9ULJ7 1429 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 A2ML1A8K2U0 1454 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 ERVK-7P63135 1459 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 PLA2R1Q13018 1463 aa10.48□□□□□ -0.73
LINC00349-201ENST00000448748 IQGAP3Q86VI3 1631 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 TET3O43151 1660 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 KDM5AP29375 1690 aaKnown RBP10.47□□□□□ -0.73
LINC00349-201ENST00000448748 TXLNAP40222 546 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 SH3PXD2AQ5TCZ1 1133 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 ANKMY2Q8IV38 441 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 NLRP1Q9C000 1473 aa10.47□□□□□ -0.73
LINC00349-201ENST00000448748 SLURP2P0DP57 97 aa10.46□□□□□ -0.73
LINC00349-201ENST00000448748 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.73
LINC00349-201ENST00000448748 ARSJQ5FYB0 599 aaPredicted RBP10.46□□□□□ -0.73
LINC00349-201ENST00000448748 ZNF232Q9UNY5 417 aa10.46□□□□□ -0.73
LINC00349-201ENST00000448748 POLR1AO95602 1720 aaPredicted RBP10.45□□□□□ -0.74
LINC00349-201ENST00000448748 A0A1W2PNR3 127 aa10.45□□□□□ -0.74
LINC00349-201ENST00000448748 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
LINC00349-201ENST00000448748 SRSF11Q05519 484 aaKnown RBP10.45□□□□□ -0.74
LINC00349-201ENST00000448748 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
LINC00349-201ENST00000448748 WHAMMQ8TF30 809 aa10.45□□□□□ -0.74
LINC00349-201ENST00000448748 ARXQ96QS3 562 aa10.45□□□□□ -0.74
LINC00349-201ENST00000448748 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
LINC00349-201ENST00000448748 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 SYNMO15061 1565 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 RPRD2Q5VT52 1461 aaKnown RBP10.44□□□□□ -0.74
LINC00349-201ENST00000448748 TNRQ92752 1358 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 WASHC2CQ9Y4E1 1318 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 SERTM1A2A2V5 107 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 EML1O00423 815 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 C21orf2O43822 256 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 LGR5O75473 907 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 PSMA6P60900 246 aaKnown RBP10.44□□□□□ -0.74
LINC00349-201ENST00000448748 FAM50AQ14320 339 aaKnown RBP10.44□□□□□ -0.74
LINC00349-201ENST00000448748 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
LINC00349-201ENST00000448748 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 MX2P20592 715 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 HSPA2P54652 639 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 ZNF385CQ66K41 422 aaPredicted RBP10.43□□□□□ -0.74
LINC00349-201ENST00000448748 ABHD17AQ96GS6 310 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 HINFPQ9BQA5 517 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 NDFIP2Q9NV92 336 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 E9PCH4 1651 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 PIK3C2BO00750 1634 aa10.43□□□□□ -0.74
LINC00349-201ENST00000448748 PTPRTO14522 1441 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 NOS1P29475 1434 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 NAIPQ13075 1403 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 PPP1R12BO60237 982 aaPredicted RBP10.42□□□□□ -0.74
LINC00349-201ENST00000448748 BNIP3LO60238 219 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 BICDL1Q6ZP65 573 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 NLRP8Q86W28 1048 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 SCG3Q8WXD2 468 aaKnown RBP10.42□□□□□ -0.74
LINC00349-201ENST00000448748 CCDC97Q96F63 343 aaPredicted RBP10.42□□□□□ -0.74
LINC00349-201ENST00000448748 ZCCHC2Q9C0B9 1178 aaKnown RBP10.42□□□□□ -0.74
LINC00349-201ENST00000448748 PHF24Q9UPV7 400 aa10.42□□□□□ -0.74
LINC00349-201ENST00000448748 CFAP65Q6ZU64 1925 aaKnown RBP10.42□□□□□ -0.74
LINC00349-201ENST00000448748 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
LINC00349-201ENST00000448748 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
LINC00349-201ENST00000448748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.41□□□□□ -0.74
LINC00349-201ENST00000448748 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
LINC00349-201ENST00000448748 FIGNL1Q6PIW4 674 aa10.41□□□□□ -0.74
LINC00349-201ENST00000448748 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
LINC00349-201ENST00000448748 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
LINC00349-201ENST00000448748 CHMP3Q9Y3E7 222 aa10.41□□□□□ -0.74
LINC00349-201ENST00000448748 HCN4Q9Y3Q4 1203 aa10.41□□□□□ -0.74
LINC00349-201ENST00000448748 UGGT1Q9NYU2 1555 aa10.4□□□□□ -0.74
LINC00349-201ENST00000448748 KLRG1Q96E93 195 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms